Search results for " Ion"

showing 10 items of 2482 documents

Vibrational and Molecular Properties of Mg2+ Binding and Ion Selectivity in the Magnesium Channel MgtE

2018

Magnesium ions (Mg2+) are crucial for various biological processes. A bacterial Mg2+ channel, MgtE, tightly regulates the intracellular Mg2+ concentration. Previous X-ray crystal structures showed that MgtE forms a dimeric structure composed of a total of 10 transmembrane α helices forming a central pore, and intracellular soluble domains constituting a Mg2+ sensor. The ion selectivity for Mg2+ over Ca2+ resides at a central cavity in the transmembrane pore of MgtE, involving a conserved aspartate residue (Asp432) from each monomer. Here, we applied ion-exchange-induced difference FTIR spectroscopy to analyze the interactions between MgtE and divalent cations, Mg2+ and Ca2+. Using site-dire…

0301 basic medicinechemistry.chemical_classification010304 chemical physicsMagnesiumchemistry.chemical_elementCrystal structure01 natural sciencesTransmembrane proteinSurfaces Coatings and FilmsDivalentIon03 medical and health scienceschemistry.chemical_compoundCrystallography030104 developmental biologyMonomerchemistry0103 physical sciencesMaterials ChemistryCarboxylatePhysical and Theoretical ChemistryMagnesium ionThe Journal of Physical Chemistry B
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Pb2+complexes of small-cavity azamacrocyclic ligands: thermodynamic and kinetic studies

2017

The synthesis, acid-base behavior and Pb2+ coordination chemistry of the new aza-scorpiand like ligand 5-[2-(N-2-fluorenyl)ethylamino]-2,5,8-triaza[9]-2,6-pyridinophane (L1) have been studied by potentiometry, NMR and spectrofluorimetric titrations, and the results are compared with those obtained for the related compounds L2, lacking the fluorenyl group, and L3, the macrocycle lacking the pendant arm. The crystal structures obtained for complexes [PbL1][PbL1Cl](NO3)Cl2·4H2O (1) and [PbL3](ClO4)2 (2) reveal that the metal ion is located over the plane defined by the nitrogen atoms of the macrocyclic core due to its inability to accommodate the large Pb2+ ion in the macrocyclic cavity. For L…

0301 basic medicinechemistry.chemical_classification030102 biochemistry & molecular biologyStereochemistryLigandMetal ions in aqueous solutionCrystal structure010402 general chemistry01 natural sciencesDissociation (chemistry)0104 chemical sciencesCoordination complexIonInorganic ChemistryMetal03 medical and health sciencesCrystallographychemistryvisual_artvisual_art.visual_art_mediumLone pairDalton Transactions
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Colletotrin: a sesquiterpene lactone from the endophytic fungus Colletotrichum gloeosporioides associated with Trichilia monadelpha

2017

Abstract A new sesquiterpene lactone, namely colletotrin (1), together with two known fungal metabolites (2, 3), was obtained from a rice culture of Colletotrichum gloeosporioides, an endophytic fungus isolated from the stem bark of Cameroonian medicinal plant Trichilia monadelpha (Meliaceae). The structure of the new compound was established on the basis of extensive NMR analysis (1H, 13C, heteronuclear single-quantum coherence and heteronuclear multiple-bond correlation) completed by high-resolution electrospray ionization mass spectroscopy results and by comparison of these data with those of related compounds described in the literature. Their cytotoxic and antibacterial activities agai…

0301 basic medicinechemistry.chemical_classificationMeliaceaebiologyTraditional medicineChemistryElectrospray ionization030106 microbiologyGeneral Chemistrybiology.organism_classificationTrichilia monadelphaSesquiterpene lactoneEndophytePlant use of endophytic fungi in defense03 medical and health sciences030104 developmental biologyHeteronuclear moleculeColletotrichum gloeosporioidesZeitschrift für Naturforschung B
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Antimicrobial peptide–metal ion interactions – a potential way of activity enhancement

2018

Increasing bacterial and fungal drug resistance requires novel, effective antimicrobial treatments to be actively sought. Because of a general lack of resistance towards antimicrobial peptides (AMPs), they are being relied on as a novel class of therapeutics aiming to conquer drug-resistant bacteria and fungi. There are numerous ways in which AMPs might interact with pathogens, such as membrane disruption, production of ROS, inhibition of cell wall, nucleic acid and protein synthesis or by the withdrawal of essential metal ions. Biologically indispensable metal ions have a dual effect on the activity of antimicrobial peptides: (i) AMPs bind them, so that microbes cannot get enough metals es…

0301 basic medicinechemistry.chemical_classificationbiologyChemistryMetal ions in aqueous solutionAntimicrobial peptidesPeptideGeneral ChemistryDrug resistanceAntimicrobialbiology.organism_classificationCatalysis03 medical and health sciences030104 developmental biologyBiochemistryMaterials ChemistryNucleic acidMode of actionBacteriaNew Journal of Chemistry
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Whole genome semiconductor based sequencing of farmed European sea bass (Dicentrarchus labrax) Mediterranean genetic stocks using a DNA pooling appro…

2016

European sea bass (Dicentrarchus labrax) is an important marine species for commercial and sport fisheries and aquaculture production. Recently, the European sea bass genome has been sequenced and assembled. This resource can open new opportunities to evaluate and monitor variability and identify variants that could contribute to the adaptation to farming conditions. In this work, two DNA pools constructed from cultivated European sea bass were sequenced using a next generation semiconductor sequencing approach based on Ion Proton sequencer. Using the first draft version of the D. labrax genome as reference, sequenced reads obtained a total of about 1.6 million of single nucleotide polymorp…

0301 basic medicinefood.ingredientIon ProtonSNPBiologyAquatic ScienceGenomePolymorphism Single NucleotideCultivated sea baDNA sequencing03 medical and health sciencesBass (fish)Settore AGR/17 - Zootecnica Generale E Miglioramento Genetico0302 clinical medicinefoodChromosome regionsNext generation sequencingCultivated sea bass Next generation sequencing Ion Proton SNPGeneticsAnimalsSea bassGeneGeneticsGenomeCultivated sea bass; Ion Proton; Next generation sequencing; SNP; Aquatic Science; GeneticsHigh-Throughput Nucleotide SequencingIon semiconductor sequencingSequence Analysis DNA030104 developmental biologyItalyBassSelective sweepCultivated sea bass030217 neurology & neurosurgery
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Extracellular electrical recording of pH-triggered bursts in C6 glioma cell populations

2016

Extracellular electrode recording demonstrates acid-triggered electrical activity in glioma cell populations.

0301 basic medicinegliaAcid-sensing ion channelsbioelectronicsBiologySodium Channels03 medical and health sciencesBurstingchemistry.chemical_compound0302 clinical medicineCell Line TumorGliomaASICsPsalmotoxinmedicineExtracellularAnimalsHumansneoplasmsResearch ArticlesAcid-sensing ion channelIon channelLow frequency current noiseNeuronsBioelectronicsMultidisciplinarySodium channelSciAdv r-articlesGliomaHydrogen-Ion Concentrationmedicine.diseaseC6 Gliomanervous system diseasesElectrophysiological PhenomenaRatsPcTX-1030104 developmental biologychemistryCell cultureBiophysicsASICs; Acid-sensing ion channels; C6 Glioma; Electrical recording; Low frequency current noise; PcTX-1; bioelectronics; gliaNerve Net030217 neurology & neurosurgeryResearch ArticleElectrical recordingScience Advances
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Histidine tracts in human transcription factors: insight into metal ion coordination ability

2017

Consecutive histidine repeats are chosen both by nature and by molecular biologists due to their high affinity towards metal ions. Screening of the human genome showed that transcription factors are extremely rich in His tracts. In this work, we examine two of such His-rich regions from forkhead box and MAFA proteins—MB3 (contains 18 His) and MB6 (with 21 His residues), focusing on the affinity and binding modes of Cu2+ and Zn2+ towards the two His-rich regions. In the case of Zn2+ species, the availability of imidazole nitrogen donors enhances metal complex stability. Interestingly, an opposite tendency is observed for Cu2+ complexes at above physiological pH, in which amide nitrogens part…

0301 basic medicineinorganic chemicalsMaf Transcription Factors LargeStereochemistryMetal ions in aqueous solutionPeptideNerve Tissue Proteins010402 general chemistry01 natural sciencesBiochemistryInorganic ChemistryMetal03 medical and health scienceschemistry.chemical_compoundCoordination ComplexesAmideImidazoleHomeostasisHumansHistidineAmino Acid SequenceTranscription factorHistidineLigand bindingchemistry.chemical_classificationOriginal PaperMass spectrometryForkhead Transcription FactorsHydrogen-Ion ConcentrationPeptide Fragments0104 chemical sciencesZinc030104 developmental biologyBinding affinitychemistryvisual_artPeptidevisual_art.visual_art_mediumThermodynamicsHuman genomeCopperProtein BindingJournal of Biological Inorganic Chemistry
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Addressing ecological effects of radiation on populations and ecosystems to improve protection of the environment against radiation: Agreed statement…

2016

AbstractThis paper reports the output of a consensus symposium organized by the International Union of Radioecology in November 2015. The symposium gathered an academically diverse group of 30 scientists to consider the still debated ecological impact of radiation on populations and ecosystems. Stimulated by the Chernobyl and Fukushima disasters' accidental contamination of the environment, there is increasing interest in developing environmental radiation protection frameworks. Scientific research conducted in a variety of laboratory and field settings has improved our knowledge of the effects of ionizing radiation on the environment. However, the results from such studies sometimes appear…

0301 basic medicinemedicine.medical_specialtyHealth Toxicology and Mutagenesis[SDV]Life Sciences [q-bio]PopulationRadiation effects010501 environmental sciencesEnvironmental protection01 natural sciencesConstructiveArticleEcosystems03 medical and health sciencesRadiation ProtectionRadioecologyRadiation IonizingTerminology as TopicHumansMedicineEnvironmental ChemistryEcosystemEcological risk assessmenteducationWaste Management and DisposalEcosystemOrganismComputingMilieux_MISCELLANEOUS0105 earth and related environmental scienceseducation.field_of_studybusiness.industryEcologyResearchPopulationsGeneral MedicineConsensus developmentPollutionVariety (cybernetics)030104 developmental biology13. Climate actionRadiation protectionbusinessRisk assessment
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Study of the polysemic term of minerality in wine: Segmentation of consumers based on their textual responses to an open-ended survey

2016

International audience; Over the past 20 years, the word "minerality" has been increasingly used in the description of wines. However, a precise definition of the concept of minerality appears to be inexistent, and no consensual meaning, even among wine professionals, can be identified. Although this word usage seems to spread out from wine professionals to consumers, research on what consumers assume about minerality is scarce. This paper aims to study the various concepts about minerality held-by consumers by using an open-ended questionnaire.A total of 1697 French-speaking consumers responded to an, online survey and their free answers were analysed using statistical textual methods. The…

0301 basic medicinemultivariate-analysisMetaphor[ SDV.AEN ] Life Sciences [q-bio]/Food and Nutritionmedia_common.quotation_subjectWineperceptionLexiconTerroirTerminologyStyle (sociolinguistics)03 medical and health sciences0404 agricultural biotechnologyMineral kingdomPerceptionMineral ionsWord usagepreferenceAromamedia_commonWine030109 nutrition & dieteticsflavorSensory scienceAdvertising04 agricultural and veterinary sciencesText analysis040401 food sciencecultureMetaphorexpertisezealand sauvignon blancPsychology[SDV.AEN]Life Sciences [q-bio]/Food and NutritionFood ScienceMeaning (linguistics)
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Oxidation-Induced Increase In Photoreactivity of Bovine Retinal Lipid Extract

2017

Open access original paper Source : 10th EPR Workshop on Applications of EPR in Biology and Medicine, 2016 in Krakow, POLAND.; International audience; The mammalian retina contains a high level of polyunsaturated fatty acids, including docosahexaenoic acid (22:6) (DHA), which are highly susceptible to oxidation. It has been shown that one of the products of DHA oxidation-carboxyethylpyrrole (CEP), generated in situ, causes modifications of retinal proteins and induces inflammation response in the outer retina. These contributing factors may play a role in the development of age-related macular degeneration (AMD). It is also possible that some of the lipid oxidation products are photoreactiv…

0301 basic medicineretinaépithéliumLightOrganes des sensalpha-TocopherolBiochemistrysinglet oxygenchemistry.chemical_compoundspectrométrie de masseChromatography High Pressure Liquidrod outer segmentschemistry.chemical_classificationLiposomePhotorSuperoxideSinglet oxygenvitamine ephotorGeneral MedicineLipidsvertebrate retinaBiochemistryDocosahexaenoic acidAlimentation et Nutritionoxidized phospholipidsfatty-acid compositionRetina;Lipids;Polyunsaturated fatty acids;Oxidation;Photor;ROD OUTER SEGMENTS;GLYCATION END-PRODUCTS;SINGLET OXYGEN;PIGMENT EPITHELIUM;VITAMIN-E;MACULAR DEGENERATION;OXIDIZED PHOSPHOLIPIDS;MASS-SPECTROMETRY;VERTEBRATE RETINAOxidation-Reductionpolyunsaturated fatty acidsphospholipideSpectrometry Mass Electrospray IonizationChromatography Gasmacular degenerationoxidationrétineElectrospray ionizationvitamin-eSensory OrgansBiophysicsMédecine humaine et pathologieRetinalipids03 medical and health sciencesLipid oxidationZeaxanthinsacide gras polyinsaturé[ SDV.MHEP ] Life Sciences [q-bio]/Human health and pathologyOxidationAnimalsFood and NutritionlipideOriginal PaperReactive oxygen speciesChromatography030102 biochemistry & molecular biologyElectron Spin Resonance SpectroscopyoxydationRetinaldégénérescence maculaireCell Biologymass-spectrometryvertébrépigment epitheliumOxygen030104 developmental biologychemistryLiposomesglycation end-productsQuantum TheoryCattleSpin LabelsHuman health and pathologyPolyunsaturated fatty acidssense organs[SDV.MHEP]Life Sciences [q-bio]/Human health and pathology
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