Search results for " MOLECULES"

showing 10 items of 525 documents

Human Siglec-10 can bind to vascular adhesion protein-1 and serves as its substrate

2009

AbstractLeukocytes migrate from the blood into areas of inflammation by interacting with various adhesion molecules on endothelial cells. Vascular adhesion protein-1 (VAP-1) is a glycoprotein expressed on inflamed endothelium where it plays a dual role: it is both an enzyme that oxidizes primary amines and an adhesin that is involved in leukocyte trafficking to sites of inflammation. Although VAP-1 was identified more than 15 years ago, the counterreceptor(s) for VAP-1 on leukocytes has remained unknown. Here we have identified Siglec-10 as a leukocyte ligand for VAP-1 using phage display screenings. The binding between Siglec-10 and VAP-1 was verified by different adhesion assays, and this…

ImmunologyReceptors Cell SurfaceInflammationCHO CellsPlasma protein bindingBiologyLigandsBiochemistryMice03 medical and health sciencesCricetulus0302 clinical medicinePeptide LibraryVascular BiologyCricetinaeLectinsLeukocyte TraffickingCell AdhesionmedicineAnimalsHumansEndotheliumLymphocytesProtein Structure QuaternaryCell adhesion030304 developmental biologyMice Knockout0303 health sciencesCell adhesion moleculeSoluble cell adhesion moleculesSIGLECCell BiologyHematologyAdhesionrespiratory systembacterial infections and mycosesRecombinant Proteinsrespiratory tract diseasesChemotaxis LeukocyteBiochemistry030220 oncology & carcinogenesisAmine Oxidase (Copper-Containing)medicine.symptomCell Adhesion MoleculesProtein BindingBlood
researchProduct

Vibrational Sum Frequency Generation Spectroscopy of the Water Liquid–Vapor Interface from Density Functional Theory-Based Molecular Dynamics Simulat…

2013

International audience; The vibrational sum frequency generation (VSFG) spectrum of the water liquid-vapor (LV) interface is calculated using density functional theory-based molecular dynamics simulations. The real and imaginary parts of the spectrum are in good agreement with the experimental data, and we provide an assignment of the SFG bands according to the dipole orientation of the interfacial water molecules. We use an instantaneous definition of the surface, which is more adapted to the study of interfacial phenomena than the Gibbs dividing surface. By calculating the vibrational (infrared, Raman) properties for interfaces of varying thickness, we show that the bulk spectra signature…

InfraredBulk spectra02 engineering and technologyMolecular dynamicsVibrational sum-frequency generations010402 general chemistry01 natural sciencesMolecular physicsSpectral lineInterfacial phenomenaLiquid-vapor interfaceMolecular dynamicssymbols.namesakeDipole orientationComputational chemistryGeneral Materials SciencePhysical and Theoretical ChemistryDividing surfacesDensity functionalsSum-frequency generationMolecular dynamics simulationsChemistryInterfacial water moleculesThin layers021001 nanoscience & nanotechnologyLiquid-vapor0104 chemical sciencesDipoleImaginary partsDensity functional theoryVaporssymbolsDensity functional theory[PHYS.PHYS.PHYS-CHEM-PH]Physics [physics]/Physics [physics]/Chemical Physics [physics.chem-ph]0210 nano-technologyRaman spectroscopyVarying thicknessSum frequency generation spectroscopyThe Journal of Physical Chemistry Letters
researchProduct

Applicability of the MASK-Air® App to Severe Asthma Treated with Biologic Molecules: A Pilot Study

2022

MASK-air®, a good practice of the DG Santé, has been fully validated in allergic rhinitis, but little is known about its applicability to asthmatics. We explored whether the MASK-air® application is applicable to patients with severe asthma. Severe asthmatics were proposed to use the MASK-air® application for 6 months, along with best practice treatment. Treatment of the patients was not changed based on the application results. The evolution of the visual analogue scales (VAS) for asthma, shortness of breath, rhinitis, conjunctivitis, work, and sleep was monitored using MASK-air®. Adherence to MASK-air® and to the asthma treatment was also checked. Thirteen patie…

Inorganic Chemistrysevere asthmatelemedicine; application; visual analogue scales; severe asthma; biologic moleculesOrganic ChemistryGeneral MedicinePhysical and Theoretical ChemistrySettore MED/10 - Malattie Dell'Apparato RespiratorioMolecular BiologySpectroscopyCatalysisComputer Science Applications
researchProduct

MMGBSA As a Tool To Understand the Binding Affinities of Filamin–Peptide Interactions

2013

Filamins (FLN) are large dimeric proteins that cross-link actin and work as important scaffolds in human cells. FLNs consist of an N-terminal actin-binding domain followed by 24 immunoglobulin-like domains (FLN1-24). FLN domains are divided into four subgroups based on their amino acid sequences. One of these subgroups, including domains 4, 9, 12, 17, 19, 21, and 23, shares a similar ligand-binding site between the β strands C and D. Several proteins, such as integrins β2 and β7, glycoprotein Ibα (GPIbα), and migfilin, have been shown to bind to this site. Here, we computationally estimated the binding free energies of filamin A (FLNa) subunits with bound peptides using the molecular mechan…

Integrin beta ChainsFilaminsGeneral Chemical EngineeringIntegrinPeptidePlasma protein bindingMolecular Dynamics SimulationLibrary and Information SciencesBiologyLigandsFilaminta3111Protein Structure SecondaryProtein structureProtein Interaction MappingHumansFLNAProtein Interaction Domains and MotifsBinding siteta116chemistry.chemical_classificationBinding Sitesta1182General ChemistryComputer Science ApplicationsAmino acidCytoskeletal ProteinsCrystallographyPlatelet Glycoprotein GPIb-IX ComplexchemistryCD18 AntigensBiophysicsbiology.proteinThermodynamicsPeptidesCell Adhesion MoleculesAlgorithmsProtein BindingJournal of Chemical Information and Modeling
researchProduct

Intramuscular Extracellular Matrix: Complex Environment of Muscle Cells

2002

KOVANEN, V. Intramuscular extracellular matrix: Complex environment of muscle cells. Exerc. Sport Sci. Rev., Vol. 30, No. 1, pp 20–25, 2002. Different collagen types among other extracellular matrix molecules, remodeling of the extracellular matrix with the aid of matrix metalloproteinases, and inte

IntegrinsChemistryFibrillar CollagensPhysical Therapy Sports Therapy and RehabilitationNon-Fibrillar CollagensExtracellular matrix moleculesMatrix metalloproteinaseBasement MembraneMatrix MetalloproteinasesExtracellular MatrixCell biologyExtracellular matrixHumansMyocyteOrthopedics and Sports MedicineMuscle SkeletalExercise and Sport Sciences Reviews
researchProduct

Cultivation of primmorphs from the marine sponge Suberites domuncula: morphogenetic potential of silicon and iron.

2002

Abstract Marine demosponges (phylum Porifera) are rich sources for potent bioactive compounds. With the establishment of the primmorph system from sponges, especially from Suberites domuncula , the technology to cultivate sponge cells in vitro improved considerably. This progress was possible after the elucidation that sponges are provided with characteristic metazoan cell adhesion receptors and extracellular matrix molecules which allow their cells a positioning in a complex organization pattern. This review summarizes recent data on the cultivation of sponges in aquaria and—with main emphasis—of primmorphs in vitro. It is outlined that silicon and Fe(+++) contribute substantially to the f…

IronCell Culture TechniquesBioengineeringApplied Microbiology and BiotechnologyBioreactorsSpecies SpecificityFood supplyMorphogenesisAnimalsGrowth SubstancesEcosystemCell AggregationPhylum PoriferabiologyEcologySilicatesGeneral MedicineExtracellular matrix moleculesbiology.organism_classificationCanal systemCell biologyPoriferaSuberites domunculaSpongeGene Expression RegulationFerritinsCell DivisionBiotechnologySuberitesJournal of biotechnology
researchProduct

Novel isatin-derived molecules activate p53 via interference with Mdm2 to promote apoptosis

2018

International audience; The p53 protein is a key tumor suppressor in mammals. In response to various forms of genotoxic stress p53 stimulates expression of genes whose products induce cell cycle arrest and/or apoptosis. An E3-ubiquitin ligase, Mdm2 (mouse-double-minute 2) and its human ortholog Hdm2, physically interact with the amino-terminus of p53 to mediate its ubiquitin-mediated degradation via the proteasome. Thus, pharmacological inhibition of the p53-Mdm2 interaction leads to overall stabilization of p53 and stimulation of its anti-tumorigenic activity. In this study we characterize the biological effects of a novel class of non-genotoxic isatin Schiff and Mannich base derivatives (…

Isatin0301 basic medicineProgrammed cell deathCell cycle checkpointAntineoplastic AgentsApoptosis[SDV.BC]Life Sciences [q-bio]/Cellular BiologyBiologyPiperazinesHistonesMice03 medical and health scienceschemistry.chemical_compound0302 clinical medicineNutlinCell Line TumorProto-Oncogene ProteinsAnimalsHumansMolecular Biologychemistry.chemical_classificationDNA ligaseIsatinImidazolesISMBDsProto-Oncogene Proteins c-mdm2Cell BiologyNutlinp53-activating moleculesCell biology030104 developmental biologychemistryProteasomeApoptosis030220 oncology & carcinogenesisbiology.proteinMdm2PumaTumor Suppressor Protein p53Apoptosis Regulatory Proteinsautomated microscopy system OperettaResearch PaperDevelopmental BiologyCell Cycle
researchProduct

Field-free two-direction alignment alternation of linear molecules by elliptic laser pulses

2005

We show that a linear molecule subjected to a short specific elliptically polarized laser field yields postpulse revivals exhibiting alignment alternatively located along the orthogonal axis and the major axis of the ellipse. The effect is experimentally demonstrated by measuring the optical Kerr effect along two different axes. The conditions ensuring an optimal field-free alternation of high alignments along both directions are derived.

Kerr effectI-2 MOLECULESField (physics)General Physics and AstronomyFOS: Physical sciencesLinear molecular geometry02 engineering and technologyElliptical polarizationEllipse01 natural scienceslaw.inventionOpticsREVIVAL STRUCTURESlaw0103 physical sciencesOPTICAL CENTRIFUGEAlternation (formal language theory)010306 general physicsPhysicsQuantum Physicsbusiness.industry021001 nanoscience & nanotechnologyLaserOrthogonal coordinates0210 nano-technologybusinessQuantum Physics (quant-ph)
researchProduct

Fluorescence Microscopy Studies of Structure Formation in Surfactant Monolayers

1993

Monolayers of water-insoluble surfactants (Langmuir monolayers) are important model system in basic research for studying the self-organization of organic molecules into two-dimensional layers [1, 2]. These floating films are also the basis for the build-up of complex multilayered structures on solid substrates, so-called Langmuir—Blodgett films (LB-films), which are of considerable interest in fundamental science and promise some future practical applications [3].

LangmuirStructure formationMaterials sciencePulmonary surfactantChemical engineeringBasic researchMonolayerFluorescence microscopeModel systemOrganic molecules
researchProduct

Calculated line broadening parameters for methane perturbed by diatomic molecules

2013

International audience; We report semiclassical line broadening calculations for methane perturbed by diatomic molecules: nitrogen, N2, oxygen, O2 and hydrogen, H2, at room temperature. For this, we have developed a symmetrized version of the Robert and Bonamy theory. The interaction potential was built from electrostatic (octopole and hexadecapole for methane, quadrupole for the diatomic molecules) and atom-atom contributions. The relative (classical) trajectories of the molecules were computed in the frame of the usual parabolic model, through analytical formula. High orders of developments had to be used for the short range molecular interactions in the case of N2 and O2. For H2, a lower…

Line broadening coefficients010504 meteorology & atmospheric sciencesHydrogen[ PHYS.QPHY ] Physics [physics]/Quantum Physics [quant-ph]Nitrogenchemistry.chemical_elementInfrared spectroscopySemiclassical physics02 engineering and technology7. Clean energy01 natural sciencesMethanechemistry.chemical_compound[PHYS.QPHY]Physics [physics]/Quantum Physics [quant-ph]Diatomic moleculesMoleculePhysical and Theoretical ChemistryInfrared spectroscopySpectroscopy0105 earth and related environmental sciencesLine (formation)Physics021001 nanoscience & nanotechnologyDiatomic moleculeAtomic and Molecular Physics and OpticsOxygenchemistryQuadrupoleAtomic physics0210 nano-technologyMethaneHydrogen
researchProduct