Search results for " Matrix"

showing 10 items of 2053 documents

Biominéralisation chez les Céphalopodes (Mollusca) : processus moléculaires et évolution

2021

Molluscs constitute one of the most diversified phyla within metazoans, known for their ability to mineralize a shell. The shell biomineralization is a genetically controlled process that is performed extracellularly via a calcifying organic matrix. This latter, which remains finally occluded (at least, partially) into the shell, is a mixture of proteins, glycoproteins, lipids and polysaccharides, that are collectively secreted by the external calcifying epithelium of the mantle. Today, the shell matrix is usually considered as the ‘molecular toolbox’ for constructing the shell. Since its discovery, it has been the focus of numerous studies, but mainly on bivalves and gastropods leaving cep…

BiomineralizationProteomicsBiominéralisationCéphalopodeProtéomiqueEvolutionMollusqueMatrice organiqueOrganic matrixMollusc[SDU.STU.PG] Sciences of the Universe [physics]/Earth Sciences/Paleontology[SDU.STU.PG]Sciences of the Universe [physics]/Earth Sciences/PaleontologyCephalopod
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Shell proteome of rhynchonelliform brachiopods.

2015

7 pages; International audience; Brachiopods are a phylum of marine invertebrates that have an external bivalved shell to protect their living tissues. With few exceptions, this biomineralized structure is composed of calcite, mixed together with a minor organic fraction, comprising secreted proteins that become occluded in the shell structure, once formed. This organic matrix is thought to display several functions, in particular, to control mineral deposition and to regulate crystallite shapes. Thus, identifying the primary structure of matrix proteins is a prerequisite for generating bioinspired materials with tailored properties. In this study, we employed a proteomic approach to identi…

BiomineralizationProteomicsProteomeShell (structure)BrachiopodsBiologyMatrix (biology)ProteomicsCalcium CarbonatePaleontologychemistry.chemical_compoundCalcification PhysiologicAnimal ShellsStructural Biology[SDV.BBM.GTP]Life Sciences [q-bio]/Biochemistry Molecular Biology/Genomics [q-bio.GN]ShellAnimals14. Life underwater[SDV.IB.BIO]Life Sciences [q-bio]/Bioengineering/BiomaterialsCalciteMineralsPhylumMarine invertebratesExtracellular matrix[ SDV.IB.BIO ] Life Sciences [q-bio]/Bioengineering/BiomaterialsInvertebrateschemistryEvolutionary biology[ SDV.BBM.GTP ] Life Sciences [q-bio]/Biochemistry Molecular Biology/Genomics [q-bio.GN]ProteomePeptidesBiomineralization
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Bicausative matrices to measure structural change: Are they a good tool?

1999

The causative-matrix method to analyze temporal change assumes that a matrix transforms one Markovian transition matrix into another by a left multiplication of the first matrix; the method is demand-driven when applied to input-output economics. An extension is presented without assuming the demand-driven or supply-driven hypothesis. Starting from two flow matrices X and Y, two diagonal matrices are searched, one premultiplying and the second postmultiplying X, to obtain a result the closer as possible to Y by least squares. The paper proves that the method is deceptive because the diagonal matrices are unidentified and the interpretation of results is unclear. Keywords : Input-Output ; Ch…

BiproportionBicausativePure mathematicsJEL: C - Mathematical and Quantitative Methods/C.C6 - Mathematical Methods • Programming Models • Mathematical and Simulation Modeling/C.C6.C67 - Input–Output Modelsjel:C63jel:C67JEL: D - Microeconomics/D.D5 - General Equilibrium and Disequilibrium/D.D5.D57 - Input–Output Tables and AnalysisLeast squaresMeasure (mathematics)Interpretation (model theory)JEL: C - Mathematical and Quantitative Methods/C.C6 - Mathematical Methods • Programming Models • Mathematical and Simulation Modeling/C.C6.C63 - Computational Techniques • Simulation ModelingSylvester's law of inertiaMatrix (mathematics)Diagonal matrixStatisticsJEL : D - Microeconomics/D.D5 - General Equilibrium and Disequilibrium/D.D5.D57 - Input–Output Tables and Analysis[ SHS.ECO ] Humanities and Social Sciences/Economies and finances[SHS.ECO] Humanities and Social Sciences/Economics and FinanceGeneral Environmental ScienceMathematicsJEL : C - Mathematical and Quantitative Methods/C.C6 - Mathematical Methods • Programming Models • Mathematical and Simulation Modeling/C.C6.C67 - Input–Output Modelseconomic theoryhumanities social sciencessciences humaines et socialesStochastic matrixStructural ChangeGeneral Social Scienceseconomics[SHS.ECO]Humanities and Social Sciences/Economics and Financejel:D57CausativeJEL : C - Mathematical and Quantitative Methods/C.C6 - Mathematical Methods • Programming Models • Mathematical and Simulation Modeling/C.C6.C63 - Computational Techniques • Simulation ModelingChaosMultiplicationThe Annals of Regional Science
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Iterative sparse matrix-vector multiplication for accelerating the block Wiedemann algorithm over GF(2) on multi-graphics processing unit systems

2012

SUMMARY The block Wiedemann (BW) algorithm is frequently used to solve sparse linear systems over GF(2). Iterative sparse matrix–vector multiplication is the most time-consuming operation. The necessity to accelerate this step is motivated by the application of BW to very large matrices used in the linear algebra step of the number field sieve (NFS) for integer factorization. In this paper, we derive an efficient CUDA implementation of this operation by using a newly designed hybrid sparse matrix format. This leads to speedups between 4 and 8 on a single graphics processing unit (GPU) for a number of tested NFS matrices compared with an optimized multicore implementation. We further present…

Block Wiedemann algorithmComputer Networks and CommunicationsComputer scienceGraphics processing unitSparse matrix-vector multiplicationGPU clusterParallel computingGF(2)Computer Science ApplicationsTheoretical Computer ScienceGeneral number field sieveMatrix (mathematics)Computational Theory and MathematicsFactorizationLinear algebraMultiplicationComputer Science::Operating SystemsSoftwareInteger factorizationSparse matrixConcurrency and Computation: Practice and Experience
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Synthesis and characterization of Sn(IV) complexes of lower rim 1,3-diacid derivative of calix[4]arene and their protective effects on tissue oxidati…

2005

The two Sn(IV) complexes synthesized using calix[4]arene-1,3-di-acid derivative were characterized by analytical, 1H, 13C and 119Sn NMR, matrix assisted laser desorption ionization mass, and 119Sn Mossbauer techniques and found that the complexes are tetranuclear possessing structurally two different types of tin centers. These complexes were evaluated for their protective value against blood and tissue oxidative stress in lead exposed male albino rats of Wistar strain. The results suggest that the two tin complexes significantly protect changes in lead induced biochemical variables indicative of heme synthesis pathway and exhibit only moderate effect on tissue oxidative stress. The benefic…

Blood PlateletsMaleMagnetic Resonance SpectroscopyStereochemistrychemistry.chemical_elementReversal Of Lead Toxicity In Wistar RatsAbsorption (skin)Hepatic And Renal Soft Tissuemedicine.disease_causeBiochemistryMedicinal chemistryInorganic ChemistryMetalSpectroscopy Mossbauerchemistry.chemical_compoundSpectroscopy Fourier Transform InfraredMössbauer spectroscopyOrganotin CompoundsmedicineAnimalsRats WistarStrain (chemistry)Tetranuclear Tin ComplexesChemistryHematological ParametersRatsOxidative StressMatrix-assisted laser desorption/ionizationLeadTinSpectrometry Mass Matrix-Assisted Laser Desorption-Ionizationvisual_artvisual_art.visual_art_mediumCalixarenesTinDerivative (chemistry)Oxidative stressJournal of Inorganic Biochemistry
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The first comprehensive and quantitative analysis of human platelet protein composition allows the comparative analysis of structural and functional …

2012

AbstractAntiplatelet treatment is of fundamental importance in combatting functions/dysfunction of platelets in the pathogenesis of cardiovascular and inflammatory diseases. Dysfunction of anucleate platelets is likely to be completely attributable to alterations in posttranslational modifications and protein expression. We therefore examined the proteome of platelets highly purified from fresh blood donations, using elaborate protocols to ensure negligible contamination by leukocytes, erythrocytes, and plasma. Using quantitative mass spectrometry, we created the first comprehensive and quantitative human platelet proteome, comprising almost 4000 unique proteins, estimated copy numbers for …

Blood PlateletsProteomicsProteomeImmunologyIntegrinCell BiologyHematologyBlood ProteinsBiologyProteomicsBiochemistryPathogenesisBiochemistrySpectrometry Mass Matrix-Assisted Laser Desorption-IonizationImmunologyProteomebiology.proteinPhosphorylationHumansPlateletElectrophoresis Gel Two-DimensionalPlatelet activationQuantitative analysis (chemistry)Protein Processing Post-TranslationalChromatography LiquidBlood
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Five-year results following treatment of intrabony defects with enamel matrix proteins and guided tissue regeneration

2004

Treatment with enamel matrix proteins (EMD) or guided tissue regeneration (GTR) has been shown to enhance periodontal regeneration. However, until now there are limited data on the long-term results following these treatment modalities.The aim of the present clinical study was to present the 5-year results following treatment of intrabony defects with EMD, GTR, combination of EMD and GTR, and open flap debridement (OFD).Forty-two patients, each of whom displayed one intrabony defect of a probing depth of at least 6 mm, were randomly treated with one of the four treatment modalities. The following parameters were evaluated prior to surgery, at 1 year and at 5 years after: plaque index, gingi…

Bone RegenerationTreatment outcomeAlveolar Bone LossDentistryStatistics NonparametricRoot PlaningPrimary outcomeDental Enamel ProteinsHumansMedicineBone regenerationAnalysis of VarianceEnamel paintbusiness.industryOpen flap debridementRoot planingLong term resultsMiddle Agedvisual_artGuided Tissue Regeneration Periodontalvisual_art.visual_art_mediumPeriodonticsPeriodontal IndexbusinessEnamel matrix proteinsFollow-Up StudiesJournal of Clinical Periodontology
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Distribution of Cartilage Proteoglycan (Aggrecan) Core Protein and Link Protein Gene Expression during Human Skeletal Development

1991

The distribution of cartilage proteoglycan core protein (aggrecan) and cartilage proteoglycan link protein was investigated by in situ hybridization during different stages of human skeletal development. Aggrecan and link protein expression were confined to chondrocytes of the developing skeleton and other cartilaginous structures. Distribution and intensity of the signal was identical with aggrecan as compared to link protein probes. Parallel to the calcification of cartilaginous matrix, chondrocytes of this area lost the expression of aggrecan and link protein specific mRNA and stayed negative throughout the following stages of skeletal development. Highest expression was found in the low…

Bone and BonesChondrocyteRNA ComplementaryPseudoachondroplasiaRheumatologyGene expressionmedicineHumansLectins C-TypeRNA AntisenseAggrecansAggrecanExtracellular Matrix ProteinsMessenger RNABone DevelopmentbiologyCartilageBinding proteinInfant NewbornNucleic Acid HybridizationProteinsDNAmusculoskeletal systemmedicine.diseaseMolecular biologycarbohydrates (lipids)Bone Diseases MetabolicCartilagemedicine.anatomical_structureGene Expression RegulationProteoglycanProtein Biosynthesisbiology.proteinRNAProteoglycansMatrix
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miR-29b negatively regulates human osteoclastic cell differentiation and function: Implications for the treatment of multiple myeloma-related bone di…

2013

Skeletal homeostasis relies upon a fine tuning of osteoclast (OCLs)-mediated bone resorption and osteoblast (OBLs)-dependent bone formation. This balance is unsettled by multiple myeloma (MM) cells, which impair OBL function and stimulate OCLs to generate lytic lesions. Emerging experimental evidence is disclosing a key regulatory role of microRNAs (miRNAs) in the regulation of bone homeostasis suggesting the miRNA network as potential novel target for the treatment of MM-related bone disease. Here, we report that miR-29b expression decreases progressively during human OCL differentiation in vitro. We found that lentiviral transduction of miR-29b into OCLs, even in the presence of MM cells,…

Bone diseasePhysiologyCellular differentiationCathepsin KClinical BiochemistryGene ExpressionOsteoclastsOsteolysisMMP9Cathepsin KCells CulturedTartrate-resistant acid phosphataseTumorCulturedReceptor Activator of Nuclear Factor-kappa BGenes fosCell DifferentiationOsteoblastCell biologyIsoenzymesmultiple myelomamedicine.anatomical_structureMatrix Metalloproteinase 9osteoclastMatrix Metalloproteinase 2medicine.medical_specialtyfosCellsAcid PhosphataseBiologyCollagen Type IBone resorptionCell LineOsteoclastCell Line TumorInternal medicinemedicineHumansBone ResorptionOsteoblastsmicroRNA.NFATC Transcription FactorsTartrate-Resistant Acid PhosphatasemiR-29bCell Biologymedicine.diseaseActinsMicroRNAsEndocrinologyGenesAcid Phosphatase; Actins; Bone Resorption; Cathepsin K; Cell Differentiation; Cell Line Tumor; Cells Cultured; Collagen Type I; Gene Expression; Genes fos; Humans; Isoenzymes; Matrix Metalloproteinase 2; Matrix Metalloproteinase 9; MicroRNAs; Multiple Myeloma; NFATC Transcription Factors; Osteoblasts; Osteoclasts; Osteolysis; Receptor Activator of Nuclear Factor-kappa BJournal of Cellular Physiology
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Immunohistochemical Evaluation of Periodontal Regeneration Using a Porous Collagen Scaffold.

2021

(1) Aim: To immunohistochemically evaluate the effect of a volume-stable collagen scaffold (VCMX) on periodontal regeneration. (2) Methods: In eight beagle dogs, acute two-wall intrabony defects were treated with open flap debridement either with VCMX (test) or without (control). After 12 weeks, eight defects out of four animals were processed for paraffin histology and immunohistochemistry. (3) Results: All defects (four test + four control) revealed periodontal regeneration with cementum and bone formation. VCMX remnants were integrated in bone, periodontal ligament (PDL), and cementum. No differences in immunohistochemical labeling patterns were observed between test and control sites. N…

Bone sialoproteinPathologyBone RegenerationBiology (General)610 Medicine & healthSpectroscopyDental CementumbiologyTissue ScaffoldsChemistrybiomaterialGeneral MedicineEpithelial cell rests of MalassezComputer Science ApplicationsChemistrymedicine.anatomical_structureimmunohistochemistryKeratinsCollagenPorosityBlood vesselmedicine.medical_specialtyPeriodontal DebridementQH301-705.5Periodontal Ligament610 Medicine & healthvolume-stable collagen matrixCatalysisCollagen Type IArticleInorganic ChemistryhistologyDogsstomatognathic systemProliferating Cell Nuclear Antigenperiodontal regenerationmedicinePeriodontal fiberAnimalsIntegrin-Binding SialoproteinCementumPhysical and Theoretical Chemistryintrabony defectMolecular BiologyQD1-999Regeneration (biology)Organic ChemistryOpen flap debridementcollagen scaffoldHistologybiology.proteinGuided Tissue Regeneration PeriodontalCell Adhesion MoleculesInternational journal of molecular sciences
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