Search results for " Mediterranean sea."

showing 10 items of 201 documents

DNA barcoding for species assignment: the case of Mediterranean marine fishes

2014

Background: DNA barcoding enhances the prospects for species-level identifications globally using a standardized and authenticated DNA-based approach. Reference libraries comprising validated DNA barcodes (COI) constitute robust datasets for testing query sequences, providing considerable utility to identify marine fish and other organisms. Here we test the feasibility of using DNA barcoding to assign species to tissue samples from fish collected in the central Mediterranean Sea, a major contributor to the European marine ichthyofaunal diversity. Methodology/Principal Findings: A dataset of 1278 DNA barcodes, representing 218 marine fish species, was used to test the utility of DNA barcodes…

Mediterranean climateBiophysicsSettore BIO/05 - Zoologialcsh:MedicineMarine and Aquatic SciencesMarine BiologyBiologyResearch and Analysis MethodsDNA barcodingBiochemistryBarcoding Fishes Mediterranean Sea Atlantic Ocean.Marine species diversityMediterranean seaModel OrganismsSpecies SpecificityFishes -- Mediterranean SeaPhylogeneticsMarine MonitoringNucleic AcidsMediterranean SeaAnimalsDNA Barcoding Taxonomic14. Life underwaterGenes -- Researchlcsh:SciencePhylogenyMultidisciplinaryScience & TechnologyEcologyEcologylcsh:REcology and Environmental SciencesMarine EcologyFishesMarine fishBiology and Life SciencesFisheries ScienceDNAAnimal ModelsClassificationEvolutionary biologyDna barcodesEarth Scienceslcsh:QTaxonomy (biology)Nucleotide sequenceResearch Article
researchProduct

Overlapping patterns of morphometric and genetic differentiation in the Mediterranean goby Pomatoschistus tortonesei Miller, 1968 (Perciformes, Gobii…

2012

Abstract. The genetic and morphological variations of Pomatoschistus tortonesei Miller, 1968 were studied in samples collected from three Tunisian lagoons. The morphological analysis included 18 morphometric measurements and was based on linear discriminant analysis (LDA), whereas the genetic analysis was based on the 16S-rRNA and COI mitochondrial genes. Both analyses differentiated the populations and demonstrated consistently a well-supported differentiation between the western Mediterranean samples (Bizerta and Tunis South lagoons) and the eastern Mediterranean sample (El Bibane lagoon). The observed differentiation could be explained in terms of the geographic isolation of the various …

Mediterranean climateGenetic diversityGobiidae; Genetic diversity; Lagoon ecosystems; Mediterranean Sea; MorphometrybiologyEcologyMorphometryPomatoschistus tortoneseiSettore BIO/05 - ZoologiaGobyGenetic VariationZoologybiology.organism_classificationBiological EvolutionGenetic diversityPerciformesPerciformesPhenotypeMediterranean seaLagoon ecosystemMorphological analysisMediterranean SeaAnimalsBiological dispersalAnimal Science and ZoologyGobiidaeZoology
researchProduct

Genetic architecture of the marbled goby Pomatoschistus marmoratus (Perciformes, Gobiidae) in the Mediterranean Sea

2011

The marbled goby Pomatoschistus marmoratus, a species inhabiting coastal Mediterranean lagoons, has been studied by measuring its mitochondrial DNA variation. This analysis revealed a Mediterranean west vs east split and, subsequently, an eastern differentiation among the Libyan–Tunisian Gulf, the Adriatic Sea and the Aegean Sea. The high cohesion between the samples collected in the vast area of western Mediterranean contrasts with the genetic mosaic of the more sub-structured eastern Mediterranean. This western homogeneity can not yet be fully explained even if a human-mediated migratory flow, due to a maritime traffic, has been posited. The pattern in the eastern basin revealed a genetic…

Mediterranean climateMarbled gobySettore BIO/05 - ZoologiaDNA MitochondrialPerciformesPomatoschistusEvolution MolecularMediterranean seaGeneticsMediterranean SeaAnimalsMolecular BiologyEcology Evolution Behavior and SystematicsPomatoschistus marmoratus mtDNA Phylogeography Siculo-Tunisian strait Adriatic Sea Aegean Sea Lagoon habitat molecular marker Pomatoschistus marmoratus Mediterranean SeabiologyEcologyGenetic VariationSequence Analysis DNAbiology.organism_classificationPerciformesFisheryPhylogeographyGenetics PopulationHabitatHaplotypesGenetic structureHydrography
researchProduct

Mediterranean circulation perturbations over the last five centuries: Relevance to past Eastern Mediterranean Transient-type events

2016

The Eastern Mediterranean Transient (EMT) occurred in the Aegean Sea from 1988 to 1995 and is the most significant intermediate-to-deep Mediterranean overturning perturbation reported by instrumental records. The EMT was likely caused by accumulation of high salinity waters in the Levantine and enhanced heat loss in the Aegean Sea, coupled with surface water freshening in the Sicily Channel. It is still unknown whether similar transients occurred in the past and, if so, what their forcing processes were. In this study, sediments from the Sicily Channel document surface water freshening (SCFR) at 1910 ± 12, 1812 ± 18, 1725 ± 25 and 1580 ± 30 CE. A regional ocean hindcast links SCFR to enhanc…

Mediterranean climateMultidisciplinary010504 meteorology & atmospheric sciencesAtmospheric circulationEMT010502 geochemistry & geophysics01 natural sciencesArticleBottom waterEastern Mediterranean TransientMediterranean seaOceanographyPaleoceanography13. Climate actionPaleoceanographyNorth Atlantic oscillationAegean SeaAtlantic multidecadal oscillationMediterranean SeacirculationThermohaline circulation14. Life underwaterPaleoceanography; Mediterranean Sea; Eastern Mediterranean transientGeology0105 earth and related environmental sciencesScientific Reports
researchProduct

Microbial and meiofaunal response to intensive mussel-farm biodeposition in coastal sediments of the Western Mediterranean

2000

We studied the impact of organic loads due to the biodeposition of a mussel farm in a coastal area of the Tyrrhenian Sea (Western Mediterranean). Sediment chemistry, microbial and meiofaunal assemblages were investigated from March 1997 to February 1998 on monthly basis at two stations: the first was located under the mussel farm, while the second was at about 1-km distance and served as control. Benthic response to changes in the biodepositional regime was investigated in terms of biochemical composition of the sedimentary organic matter, phytopigment content, bacterial abundance and composition and meiofaunal community structure. A large accumulation of chloroplastic pigments, proteins an…

Mediterranean climateSettore BIO/07 - EcologiaBiomass (ecology)animal structuresBacteriaEcologyMeiobenthosMeiofaunafungiCommunity structureMusselAquatic ScienceCyanobacteriaOceanographyPollutionmussel farm; bacteria; cyanobacteria; picoeukaryotes; meiofauna; Mediterranean SeaOceanographyMediterranean seaBenthic zoneMediterranean SeaMussel farmSedimentary organic matterEnvironmental sciencePicoeukaryote
researchProduct

Analysis of the trophic role of Mediterranean seagrasses in marine coastal ecosystems: a review

2009

Abstract Seagrasses form high-productivity coastal ecosystems, providing habitats for many organisms, including species of commercial value. They play a significant role as a direct food source for herbivores and also enter detrital food webs. In this review, the trophic ecology of Mediterranean seagrass ecosystems is revised, with major emphasis on Posidonia oceanica, the most extensively studied seagrass. The major topics are the role of herbivory and detritus, the contribution to littoral fish production, exportation to other ecosystems and the seagrass role as a vector of anthropogenic nutrients into food webs. Topics are discussed by analysing both conventional knowledge and new insigh…

Mediterranean climateSettore BIO/07 - EcologiaHerbivoreDetritusStable isotope ratioEcologyPlant ScienceAquatic ScienceMediterranean seaEnvironmental scienceEcosystemdetritus food webs herbivory marine phnerogams Mediterranean Sea stable isotopesEcology Evolution Behavior and SystematicsTrophic level
researchProduct

Protein differences among the Mediterranean species of the genus Spicara.

1996

Protein electrophoresis (PAGE) was used to study the three morphologically different species of Spicara (S. flexuosa, S. maena, S. smaris). Of the 28 enzymatic and additional myogenic loci, five monomorphic loci (LDH-1*, G6PD-1*, PGI-1* and two PMMs*) were species-specific markers of S. smaris with respect to S. flexuosa and S. maena. Four of the 28 enzymatic loci were polymorphic (EST-1*, GLDH*, PEPD*, PGI-2*). Discriminating genetic markers were not identified between S. flexuosa and S. maena. Genetic distance (D) as calculated by Nei’s index (1978), between S. smaris v. S. maena and S. flexuosa showed a value, respectively of D=0·137 and 0·141. Between S. flexuosa and S. maena the value …

Mediterranean climateSpicaragenetic distanceEcologyProtein electrophoresis; species differentiation; genetic distance; Spicara; Mediterranean Sea.species differentiationSettore BIO/05 - ZoologiaZoologyAquatic ScienceBiologyGel electrophoresis of proteinsbiology.organism_classificationGenetic distanceGenusGenetic markerBlack seaMediterranean Sea.SpicaraProtein electrophoresiEcology Evolution Behavior and Systematics
researchProduct

Changes in behavioural response of Mediterranean Seabass (Dicenthratus labrax L.) under different feeding distributions

2009

Captive-induced behavioural deviations may involve many aspects of fish behaviour such as swimming activity and enhancement of individual aggressiveness. We studied seabass (Dicentrarchus labrax) behaviour as a function of manual and automatic feeding distribution modes. Under manual mode, the food is distributed over an extended area for a longer period, and its precise location is not always predictable, while with pneumatic automatic feeders, fish receive the same amount of resource, which is concentrated in the same surface area over a shorter period. We compared seabass behaviour under automatic and manual conditions collecting video image recordings before, during, and after feeding d…

Mediterranean climatebiology040301 veterinary sciencesEcologyCaptivity Dicentrarchus labrax Behaviour Welfare Mediterranean Sea0402 animal and dairy scienceZoologyCaptivityAquatic animal04 agricultural and veterinary sciencesCaptivity Dicentrarchus labrax Behaviour Welfare Mediterranean Sea.biology.organism_classification040201 dairy & animal science0403 veterinary scienceWater columnSwimming behaviourAgonistic behaviourAnimal Science and ZoologyDicentrarchuslcsh:Animal cultureMorninglcsh:SF1-1100
researchProduct

First historical records of Carcharhinus brachyurus (Chondrichthyes, Carcharhiniformes) in the Mediterranean Sea

2009

The dried jaws of two specimens of Carcharhinus brachyurus were found in the collections of the Zoological Museum of the University of Palermo. Both pieces belong to the great Doderlein collection of fishes from Sicily assembled during the end of the nineteenth century (1862-1892) and are labelled as Carcarias (Prionodon) lamia and Carcharias lamia, respectively. These findings represent the first historical evidence of the presence of C. brachyurus in the Mediterranean Sea and add the southern Tyrrhenian to the species distribution within the Mediterranean. Moreover, sexual dimorphism in tooth morphology is documented for the first time in Mediterranean specimens. Some meristic and morphol…

Mediterranean climatebiologyEcologyCarcharhinus brachyurus historical record Mediterranean SeaPrionodonSettore BIO/05 - Zoologiabiology.organism_classificationChondrichthyesCarchariasMediterranean seaCarcharhinusCarcharhiniformesAnimal Science and ZoologyMeristics
researchProduct

Unveiling the Relationship Between Sea Surface Hydrographic Patterns and Tuna Larval Distribution in the Central Mediterranean Sea

2021

Thunnus thynnus (Atlantic bluefin tuna, ABT) and other tuna species reproduce in the Mediterranean Sea during the summer period. Despite the Central Mediterranean Sea, the Strait of Sicily in particular, being a key spawning site for many tuna species, little is known on the effects of oceanographic variability on their larval distribution in this area. The abundance and presence-absence of larval specimens for three tuna species (ABT, bullet tuna and albacore) were modeled in order to examine their relationships with environmental factors, by analysing historical in situ information collected during seven annual surveys (2010–2016). The results revealed that most tuna larvae for the three …

Mediterranean climateichthyoplanktonSciencespawningOcean EngineeringAquatic ScienceQH1-199.5OceanographyMediterranean seaAuxis rocheiAbundance (ecology)Auxis rochei ichthyoplankton Mediterranean Sea multivariate statistical analysis spawning Thunnus alalunga Thunnus thynnusThunnus alalungaWater Science and Technologymultivariate statistical analysisGlobal and Planetary ChangebiologyAlbacoreQfood and beveragesGeneral. Including nature conservation geographical distributionIchthyoplanktonbiology.organism_classificationOceanographyThunnus thynnusBullet tunaTunahuman activitiesThunnusFrontiers in Marine Science
researchProduct