Search results for " Modeling"

showing 10 items of 2411 documents

Architectural shapes generated in 3D Geobrowser through environmental constraints

2009

Generative designcity modelingvisual analyticsprocedural modeling
researchProduct

Il Generative Design nel processo architettonico

2009

Generative designgenerative architecturecity modelingbuilding modeling
researchProduct

The Origins of Lactase Persistence in Europe

2009

Lactase persistence (LP) is common among people of European ancestry, but with the exception of some African, Middle Eastern and southern Asian groups, is rare or absent elsewhere in the world. Lactase gene haplotype conservation around a polymorphism strongly associated with LP in Europeans (−13,910 C/T) indicates that the derived allele is recent in origin and has been subject to strong positive selection. Furthermore, ancient DNA work has shown that the −13,910*T (derived) allele was very rare or absent in early Neolithic central Europeans. It is unlikely that LP would provide a selective advantage without a supply of fresh milk, and this has lead to a gene-culture coevolutionary model w…

Genetic MarkersOld WorldQH301-705.5medicine.medical_treatmentLactoseBiologyComputational Biology/Molecular GeneticsEvolution MolecularCellular and Molecular NeuroscienceGene FrequencyGeneticsmedicineHumansComputer SimulationVitamin DBiology (General)AlleleMolecular BiologyAllele frequencyAllelesEcology Evolution Behavior and SystematicsNutritionLactaseGeneticsLactose intolerancePolymorphism GeneticNatural selectionEvolutionary Biology/Evolutionary and Comparative GeneticsGeographyEcologyComputational BiologyBayes TheoremLactasemedicine.diseaseComputational Biology/Evolutionary ModelingDietEvolutionary Biology/Human EvolutionEuropeLactase persistenceAncient DNAHaplotypesComputational Theory and MathematicsEvolutionary biologyModeling and SimulationResearch ArticlePLoS Computational Biology
researchProduct

Distributed and Lumped Parameter Models for the Characterization of High Throughput Bioreactors

2016

Next generation bioreactors are being developed to generate multiple human cell-based tissue analogs within the same fluidic system, to better recapitulate the complexity and interconnection of human physiology. The effective development of these devices requires a solid understanding of their interconnected fluidics, to predict the transport of nutrients and waste through the constructs and improve the design accordingly. In this work, we focus on a specific model of bioreactor, with multiple input/outputs, aimed at gen- erating osteochondral constructs, i.e., a biphasic construct in which one side is cartilagi- nous in nature, while the other is osseous. We next develop a general computat…

Genetics and Molecular Biology (all)0301 basic medicineComputer scienceDistributed computinglcsh:Medicine02 engineering and technologyMedicine (all); Biochemistry Genetics and Molecular Biology (all); Agricultural and Biological Sciences (all)BiochemistryOxygenPLLA bioreactor computational modelMedicine and Health SciencesFluid dynamicslcsh:ScienceThroughput (business)Flow RateMultidisciplinaryPhysicsSimulation and ModelingMedicine (all)Classical MechanicsVolumetric flow rateChemistryConnective TissuePhysical SciencesAnatomyResearch ArticleChemical ElementsCell Physiology0206 medical engineeringMicrofluidicschemistry.chemical_elementFluid MechanicsResearch and Analysis MethodsContinuum Mechanics03 medical and health sciencesBioreactorFluidicsFluid Flowlcsh:RBiology and Life SciencesBiological TransportFluid DynamicsCell BiologyConstruct (python library)020601 biomedical engineeringCell MetabolismOxygenMetabolismBiological TissueCartilage030104 developmental biologyAgricultural and Biological Sciences (all)chemistryFlow (mathematics)lcsh:QPorous mediumPLOS ONE
researchProduct

Improvement of ALT decay kinetics by all-oral HCV treatment: Role of NS5A inhibitors and differences with IFN-based regimens

2017

Background Intracellular HCV-RNA reduction is a proposed mechanism of action of direct-acting antivirals (DAAs), alternative to hepatocytes elimination by pegylated-interferon plus ribavirin (PR). We modeled ALT and HCV-RNA kinetics in cirrhotic patients treated with currently-used all-DAA combinations to evaluate their mode of action and cytotoxicity compared with telaprevir (TVR)+PR. Study design Mathematical modeling of ALT and HCV-RNA kinetics was performed in 111 HCV-1 cirrhotic patients, 81 treated with all-DAA regimens and 30 with TVR+PR. Kinetic-models and Cox-analysis were used to assess determinants of ALT-decay and normalization. Results HCV-RNA kinetics was biphasic, reflecting …

Genetics and Molecular Biology (all)SimeprevirMaleHepacivirusHepacivirusPharmacologyBiochemistryStiffness0302 clinical medicineAnimal CellsMedicineAmino Acidslcsh:ScienceAlanineOrganic CompoundsLiver Diseases3. Good healthCirrhosisPhysical SciencesAdministrationInterferon030211 gastroenterology & hepatologyDrug Therapy CombinationCellular TypesOligopeptidesHumanOralMaterials ScienceGastroenterology and HepatologyMicrobiologyAntiviral Agents03 medical and health sciencesDrug TherapyHumansAgedKineticPharmacologyHepaciviruBiochemistry Genetics and Molecular Biology (all)Mathematical Modelinglcsh:RChemical CompoundsBiology and Life SciencesProteinsmedicine.diseasedigestive system diseasesAdministration Oral; Aged; Alanine Transaminase; Antiviral Agents; Drug Therapy Combination; Female; Hepacivirus; Hepatitis C; Humans; Interferons; Kinetics; Male; Middle Aged; Oligopeptides; RNA Viral; Ribavirin; Simeprevir; Sofosbuvir; Treatment Outcome; Viral Nonstructural Proteins; Biochemistry Genetics and Molecular Biology (all); Agricultural and Biological Sciences (all)030104 developmental biologyAgricultural and Biological Sciences (all)chemistryAliphatic Amino Acidslcsh:Q0301 basic medicineSofosbuvirlcsh:MedicineAdministration OralMedicine (all); Biochemistry Genetics and Molecular Biology (all); Agricultural and Biological Sciences (all)Viral Nonstructural ProteinsTelaprevirchemistry.chemical_compoundSimeprevirMedicine and Health SciencesViralMultidisciplinarybiologyAntimicrobialsMedicine (all)Simulation and ModelingDrugsAlanine TransaminaseHepatitis CMiddle AgedAntiviralsHepatitis CChemistryTreatment OutcomeLiverCombinationOligopeptideRNA ViralFemaleAnatomymedicine.drugResearch ArticleSettore MED/17 - Malattie InfettiveGeneral Science & TechnologyMaterial PropertiesResearch and Analysis MethodsMicrobial ControlVirologyRibavirinMechanical PropertiesNS5AAntiviral Agentbusiness.industryRibavirinHCV DAA ALTViral Nonstructural ProteinOrganic ChemistryCell Biologybiology.organism_classificationKineticsAlanine transaminaseAdministration Oral; Aged; Alanine Transaminase; Antiviral Agents; Drug Therapy Combination; Female; Hepacivirus; Hepatitis C; Humans; Interferons; Kinetics; Male; Middle Aged; Oligopeptides; RNA Viral; Ribavirin; Simeprevir; Sofosbuvir; Treatment Outcome; Viral Nonstructural Proteinsbiology.proteinHepatocytesRNAInterferonsSofosbuvirbusiness
researchProduct

Human blastocysts derived from monopronuclear zygotes: a biological model for the study of ploidy, euploidy, topography and heteroparental inheritance

2019

GeneticsInheritance (object-oriented programming)ZygoteReproductive MedicineBiological modelingObstetrics and GynecologyPloidyBiologyFertility and Sterility
researchProduct

DNA Photodamage and Repair: Computational Photobiology in Action

2020

DNA is constantly exposed to external and metabolic stress agents, including the solar radiation and in particular the UV portion of the electromagnetic spectrum. Such source of stress can induce photochemical modification of the structure of DNA and of its basic components, i.e. the nucleobases. DNA lesions may ultimately lead to genomic instability, mutations, and even to carcinogenesis. Hence, cells dispose of complex biochemical repair pathways in charge of remove the DNA lesions and avoid their accumulation. In this Chapter, we present the complexity of the DNA lesion chemical and structural space, also complicated by the intricate coupling with the biological relevant signaling pathwa…

Genome instability0303 health sciencesComputer scienceDNA repairfood and beveragesComputational biology010402 general chemistrymedicine.disease_cause01 natural sciencesMultiscale modeling0104 chemical sciences[CHIM.THEO]Chemical Sciences/Theoretical and/or physical chemistry03 medical and health scienceschemistry.chemical_compoundPhotobiologychemistrymedicineMetabolic StressCarcinogenesisComputingMilieux_MISCELLANEOUSDNA030304 developmental biology
researchProduct

The geochemical riddle of “low-salinity gypsum” deposits

2022

International audience; Gypsum makes up about one fifth of giant salt deposits formed by evaporation of seawater throughout Earth’s history. Although thermodynamic calculations and precipitation experiments predict that gypsum precipitates when the salinity of evaporating seawater attains about 110 g kg-1, gypsum deposits of the Mediterranean Salt Giant often bear the geochemical signature of precipitation from less saline water masses. Addressing this geochemical riddle is important because marine gypsum deposition and continental gypsum erosion affect the global carbon cycle. We investigated gypsum deposits formed in the marginal basins of the Mediterranean Sea during the Messinian Salini…

Geochemistry and Petrology[SDU.STU.GC]Sciences of the Universe [physics]/Earth Sciences/GeochemistryGeochemical modelingLow-salinity gypsumSettore GEO/01 - Paleontologia E PaleoecologiaHydration water isotopes (δBiogeochemical S cycleFluid inclusionsSettore GEO/08 - Geochimica E Vulcanologia
researchProduct

Ruined Archeological Heritage: Survey, 3D Modeling, Virtual Anastylosis.

2013

The study focuses on the use of 3D surveying and digital representation tools for the purpose of documenting archaeological monuments whose restoration involves the disassembly and repositioning of blocks. The case study in question is a building at the west end of the San Biagio archaic sanctuary, located within the archaeological site of Agrigento. The monument is a rectangular building encompassing two pools, whose foundations are suffering from deep decay and there are large spaces between the walls which have become disconnected. Surveying and 3D modelling have been used to illustrate the existing state of the building. Plans, sections and orthophotos have been created to support the …

GeographyAnastylosisbusiness.industryOrthophoto3d modelSettore ICAR/17 - DisegnoVirtual restoration survey digital modeling3D modelingbusinessArchaeology
researchProduct

Assessment of bioavailability and effects of chemicals due to remediation actions with caging mussels (Anodonta anatina) at a creosote-contaminated l…

2002

A study was conducted at Lake Jämsänvesi in Central Finland, to identify the potential ecotoxicological risks of the remediation operation of a creosote-/PAH-contaminated lake sediment, made by capping during the years 1998-1999. Mussels (Anodonta anatina) were deployed to the lake at the same time as the remediation operation was started in November 1998. The contaminated area (0.5 ha) was covered by a filter geotextile (polypropylene), gravel and sand (1-1.5m) which were spread out on the ice and let to sink onto the bottom of the lake when the ice melted in May 1999. The possible impacts of capping to the adjacent environment were assessed from mussels exposed and particulate material se…

Geologic SedimentsEnvironmental EngineeringEnvironmental remediationBiological AvailabilityRisk Assessmentlaw.inventionchemistry.chemical_compoundlawAnimalsPolycyclic Aromatic HydrocarbonsWater pollutionWaste Management and DisposalCreosoteWater Science and TechnologyCivil and Structural EngineeringFluorantheneHydrologybiologyEcological ModelingfungiMusselBivalviabiology.organism_classificationPollutionBivalviaCreosotechemistryTextile IndustryBioaccumulationEnvironmental scienceSurface waterWater Pollutants ChemicalEnvironmental MonitoringWater Research
researchProduct