Search results for " Modifications"

showing 10 items of 61 documents

Constitutive Promoter Occupancy by the MBF-1 Activator and Chromatin Modification of the Developmental Regulated Sea Urchin α-H2A Histone Gene

2007

The tandemly repeated sea urchin alpha-histone genes are developmentally regulated. These genes are transcribed up to the early blastula stage and permanently silenced as the embryos approach gastrulation. As previously described, expression of the alpha-H2A gene depends on the binding of the MBF-1 activator to the 5' enhancer, while down-regulation relies on the functional interaction between the 3' sns 5 insulator and the GA repeats located upstream of the enhancer. As persistent MBF-1 binding and enhancer activity are detected in gastrula embryos, we have studied the molecular mechanisms that prevent the bound MBF-1 from trans-activating the H2A promoter at this stage of development. Her…

Embryo Nonmammaliananimal structuresRestriction MappingMBF-1Down-RegulationEnhancer RNAschromatin immunoprecipitationBiologyHistone DeacetylasesactivatorHistonesHistone H3Histone H1Structural BiologyHistone H2AHistone methylationAnimalsNucleosomeHistone codenucleosome phasingPromoter Regions GeneticEnhancerBase PairingMolecular Biologyhistone modificationsGene Expression Regulation DevelopmentalGastrulaMolecular biologyChromatinNucleosomesRepressor ProteinsMutagenesis InsertionalEnhancer Elements GeneticSea Urchinsembryonic structuresTrans-ActivatorsCalmodulin-Binding ProteinsInsulator Elementssea urchin histone geneProtein Processing Post-TranslationalProtein BindingJournal of Molecular Biology
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Histone-mediated transgenerational epigenetics

2019

Abstract Epigenetic mechanisms operate at the interface between the environment and genome, by converting the environmental stimuli to phenotypic responses through changes in the chromatin landscape, which ultimately affects gene expression in the absence of alterations in DNA sequence. In this scenario, transgenerational inheritance occurs when epigenetic variations induced by environmental stimuli are transmitted through the germ line to succeeding generations that had never experienced those stimuli. There is an ever-growing list of reports indicating that histones are fundamental players in these processes in a variety of organisms. In this chapter, we provide a perspective on histone-d…

GeneticsHistonebiology.proteinInheritance (genetic algorithm)NucleosomeSettore BIO/11 - Biologia MolecolareEpigeneticsHistone-based epigenetic inheritanceHistone inheritance in diseaseHistone posttranslational modificationsHistone variantsNucleosome positioningPerpetuation of maternal histonesRetention of paternal nucleosomeTransgenerational transmission of environmental informationBiologyGenomePhenotypeGermlineChromatin
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Genetic and Cytological Analysis of Drosophila Chromatin-Remodeling Factors

2003

GeneticsSettore BIO/18 - GeneticabiologyRNA-POLYMERASE-IIDrosophila melanogasterDrosophila (subgenus)biology.organism_classificationDrosophila ProteinChromatin remodelingCell biologyHISTONE MODIFICATIONS
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Translational adaptation to heat stress is mediated by RNA 5‐methylcytosine in Caenorhabditis elegans

2021

Abstract Methylation of carbon‐5 of cytosines (m5C) is a post‐transcriptional nucleotide modification of RNA found in all kingdoms of life. While individual m5C‐methyltransferases have been studied, the impact of the global cytosine‐5 methylome on development, homeostasis and stress remains unknown. Here, using Caenorhabditis elegans, we generated the first organism devoid of m5C in RNA, demonstrating that this modification is non‐essential. Using this genetic tool, we determine the localisation and enzymatic specificity of m5C sites in the RNome in vivo. We find that NSUN‐4 acts as a dual rRNA and tRNA methyltransferase in C. elegans mitochondria. In agreement with leucine and proline bein…

Hot TemperatureProlineRibosomeGeneral Biochemistry Genetics and Molecular BiologyArticle03 medical and health sciencesNSUNCytosine0302 clinical medicineRNA modificationsLeucinem5CAnimalsRNA Processing Post-TranscriptionalCaenorhabditis elegansMolecular BiologytRNACaenorhabditis elegansprotein translation030304 developmental biologyGene Editing0303 health sciencesGeneral Immunology and MicrobiologybiologyGeneral NeuroscienceTRNA MethyltransferaseRNATranslation (biology)MethylationArticlesMethyltransferasesRibosomal RNAbiology.organism_classificationRNA BiologyAdaptation Physiological5‐methylcytosineCell biologyMitochondriatranslation efficiencyProtein BiosynthesisTransfer RNA5-MethylcytosineRNACRISPR-Cas SystemsRibosomes030217 neurology & neurosurgeryHeat-Shock ResponseThe EMBO Journal
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Oral Hygiene and Dietary Habits in Adolescents with Fixed Orthodontic Appliances: A Cross-sectional Study.

2016

ABSTRACT Objectives Fixed orthodontic appliances (FOAs) may cause a temporary deterioration of oral hygiene with corresponding gingival inflammatory changes. Optimal oral hygiene and dietary changes are essential in order to avoid periodontal inflammation. The present study investigates to what extent the recommendations made by the orthodontist are followed by young patients. Materials and methods A total of 67 adolescent patients with FOA were examined and interviewed. The control group consisted of 70 patients of the same age who had not undergone any orthodontic treatment. A specific questionnaire (assessing dietary habits, oral hygiene measures) was used and comprehensive oral findings…

MaleAdolescentCross-sectional studyAdolescent HealthDentistryDental plaqueOral hygiene03 medical and health sciences0302 clinical medicineOrthodontic AppliancesSurveys and QuestionnairesMedicineHumans030212 general & internal medicineGingival inflammationChildGeneral Dentistrybusiness.industryOral hygiene status030206 dentistryFeeding Behaviormedicine.diseaseDietary adviceOral HygieneCross-Sectional StudiesFemalebusinessDietary modificationsAdolescent healthThe journal of contemporary dental practice
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SARS CoV2 infection _The longevity study perspectives

2021

Graphical abstract

MaleAgingssRNA single-stranded RNARFLP restriction fragment length polymorphismHSPs heat shock proteinsReviewPTMs post-translational modificationsSevere Acute Respiratory SyndromeBiochemistryHIV-1 human immunodeficiency virus-1TNF-α tumor necrosis factor-αEC endothelial cells0302 clinical medicineFluAV influenza A virusI insertionMedicineIFN-γ interferon-γDIC disseminated intravascular coagulationPCR Polymerase Chain Reactionmedia_commonAged 80 and overLongevityRBD receptor-binding domainNeurologyLongevity modelMI myocardial infarctionNK natural killerhPIV2 human parainfluenza virus type 2media_common.quotation_subjectResearching genetic basis of resistance and potential pharmacological targetsLongevityDBP diastolic blood pressureNF-Kb nuclear transcription factor kBRANTES regulated upon activation normal T cell expressed and secretedMphi human macrophages03 medical and health sciencesCox 2 cyclooxygenase 2ORF open reading framePT prothrombin timeSettore MED/05 - Patologia ClinicaHumansMolecular BiologyInflammatory genesARDS acute respiratory distress syndromeNO nitric oxideD deletionCpGIs CpG islandsT2DM type 2 diabetes mellitusmedicine.diseaseFDP fibrin degradation products030104 developmental biologySARS CoV2 severe acute respiratory syndrome Coronavirus 2 virusImmunologyBMI body max indexItalian nonagenarians/centenariansRSV respiratory syncytial virusComplication030217 neurology & neurosurgeryMAPK mitogen-activated protein kinaseIP-10 IFN-γ -Inducible Protein 1040301 basic medicineAT1R activity of angiotensin 1 receptorsDCs dentritic cellsSSCP single strand conformation polymorphismACE/DD polymorphism of the angiotensin converting enzymeFGF21 fibroblast growth factor 21TLR4 toll-like receptor 4NAD nicotinamide adenine dinucleotideACE angiotensin-I converting enzymeAT2R activity of angiotensin 2 receptorsCOVID-19 Coronavirus disease 2019Respiratory distressACE2 angiotensin converting enzyme 2MKP-1 mitogen-activated protein kinase phosphatase-1 ()PD protease domainSNP single nucleotide polymorphismEH essential hypertensionTNFR tumor necrosis factor receptorINR international normalized ratio of the prothrombin timePAI-1 plasminogen activator inhibitor-1Ang angiotensinLPS lipopolysaccharideMCP1 monocyte chemoattractant protein-1medicine.symptomaPTT partial thromboplastin timeBiotechnologyDUSP1 dual specificity phosphatase 1Coronavirus disease 2019 (COVID-19)PC prostate cancerRAS renin-angiotensin aldosterone systemCCR5Δ32 genetic variant of chemokine receptorCOVID-19 Researching genetic basis of resistance and potential pharmacological targets Italian nonagenarians/centenarians Longevity modelAsymptomaticSARS-1 severe acute respiratory syndrome virus 1SIRT-1 Sirtuin 1Th1 t-helper lymphocyte type 1Immune systemROS reactive oxygen speciesTGF-β transforming growth factor betaET-1 endothelin-1ComputingMethodologies_COMPUTERGRAPHICSADAM-17 metallopeptidase domain 17business.industrySARS-CoV-2SBP systolic blood pressureCOVID-19HDACs histone deacetylasesComorbidityImmune Systembusiness5-LO lipoxygenase 5Ageing Research Reviews
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Changes in histone acetylation in the prefrontal cortex of ethanol-exposed adolescent rats are associated with ethanol-induced place conditioning

2012

Alcohol drinking during adolescence can induce long-lasting effects on the motivation to consume alcohol. Abnormal plasticity in reward-related processes might contribute to the vulnerability of adolescents to drug addiction. We have shown that binge-like ethanol treatment in adolescent rats induces alterations in the dopaminergic system and causes histone modifications in brain reward regions. Considering that histone acetylation regulates transcriptional activity and contributes to drug-induced alterations in gene expression and behavior, we addressed the hypothesis that ethanol is capable of inducing transcriptional changes by histone modifications in specific gene promoters in adolescen…

Malemedicine.medical_specialtyPrefrontal CortexHDAC inhibitionChromatin remodelingHistonesCellular and Molecular Neurosciencechemistry.chemical_compoundInternal medicineConditioning PsychologicalmedicineAnimalsEpigeneticsRats WistarConditioned place aversionPharmacologyEthanolbiologyHistone modificationsAge FactorsAcetylationSodium butyrateRatsAdolescenceHistone Deacetylase InhibitorsHistoneEndocrinologychemistryBiochemistryAcetylationbiology.proteinBrain stimulation rewardBinge-like ethanol treatmentHistone deacetylaseFOSBNeuropharmacology
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Photoluminescence of Point Defects in Silicon Dioxide by Femtosecond Laser Exposure

2021

The nature of the radiation-induced point defects in amorphous silica is investigated through online photoluminescence (PL) under high intensity ultrashort laser pulses. Using 1030 nm femtosecond laser pulses with a repetition rate of 1 kHz, it is possible to study the induced color centers through their PL signatures monitored during the laser exposure. Their generation is driven by the nonlinear absorption of the light related to the high pulse peak powers provided by femtosecond laser, allowing to probe the optical properties of the laser exposed region. The experiment is conducted as a function of the laser pulse power in samples with different OH contents. The results highlight the dif…

Materials sciencePhotoluminescenceamorphous silicastructural modificationsSilicon dioxide02 engineering and technology01 natural scienceschemistry.chemical_compoundonline photoluminescence0103 physical sciencesMaterials Chemistrypoint defectsElectrical and Electronic Engineering010306 general physicsfemtosecond lasersComputingMilieux_MISCELLANEOUS[PHYS]Physics [physics]business.industrySettore FIS/01 - Fisica SperimentaleSurfaces and Interfaces021001 nanoscience & nanotechnologyCondensed Matter PhysicsCrystallographic defectSurfaces Coatings and FilmsElectronic Optical and Magnetic MaterialschemistryFemtosecondOptoelectronicsLaser exposureAmorphous silica0210 nano-technologybusiness
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Biomaterial Surface Hydrophobicity-Mediated Serum Protein Adsorption and Immune Responses.

2019

The nature of the protein corona forming on biomaterial surfaces can affect the performance of implanted devices. This study investigated the role of surface chemistry and wettability on human serum-derived protein corona formation on biomaterial surfaces and the subsequent effects on the cellular innate immune response. Plasma polymerization, a substrate-independent technique, was employed to create nanothin coatings with four specific chemical functionalities and a spectrum of surface charges and wettability. The amount and type of protein adsorbed was strongly influenced by surface chemistry and wettability but did not show any dependence on surface charge. An enhanced adsorption of the …

Materials scienceTHP-1 Cellsplasma polymerizationwettabilityBiomaterial Surface ModificationsProtein CoronaBiocompatible Materials02 engineering and technology010402 general chemistry01 natural sciencesAdsorptionHumansGeneral Materials ScienceSurface chargeOpsoninInnate immune systemMacrophagesbiomaterialBiomaterialBlood Proteins021001 nanoscience & nanotechnologyhuman serumprotein adsorptionimmune responsesImmunity Innate0104 chemical sciencesBiophysicsProtein CoronaAdsorption0210 nano-technologyHydrophobic and Hydrophilic InteractionsProtein adsorptionACS applied materialsinterfaces
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From Microorganism-Based Amperometric Biosensors towards Microbial Fuel Cells

2021

This review focuses on the overview of microbial amperometric biosensors and microbial biofuel cells (MFC) and shows how very similar principles are applied for the design of both types of these bioelectronics-based devices. Most microorganism-based amperometric biosensors show poor specificity, but this drawback can be exploited in the design of microbial biofuel cells because this enables them to consume wider range of chemical fuels. The efficiency of the charge transfer is among the most challenging and critical issues during the development of any kind of biofuel cell. In most cases, particular redox mediators and nanomaterials are applied for the facilitation of charge transfer from a…

Microbial fuel cellBioelectric Energy SourcesPolymersMicroorganismNanotechnologyBiosensing TechniquesReview02 engineering and technologyyeastbioelectronicslcsh:Chemical technology010402 general chemistry01 natural sciencesBiochemistryRedoxAnalytical ChemistryNanomaterialsmicrobial biosensorslcsh:TP1-1185microbial biofuel cells ; yeast ; direct electron transfer ; extracellular electron transfer ; cell membrane/wall modifications ; conducting polymers ; enzyme-based biofuel cells ; bioelectronics ; microbial biosensors ; whole cell-based biosensorsdirect electron transferenzyme-based biofuel cellsElectrical and Electronic EngineeringElectrodesconducting polymersInstrumentationwhole cell-based biosensorsConductive polymerBioelectronicsextracellular electron transferChemistryfungitechnology industry and agriculturefood and beveragesmicrobial biofuel cells021001 nanoscience & nanotechnologyAtomic and Molecular Physics and Optics0104 chemical sciencescell membrane/wall modificationsBiofuel0210 nano-technologyOxidation-ReductionBiosensorSensors
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