Search results for " Ni"

showing 10 items of 3074 documents

Hybridization, ecogeographical displacement and the emergence of new lineages – A genotyping‐by‐sequencing and ecological niche and species distribut…

2021

Ecogeographical displacement of homoploid hybrid lineages from their parents is well documented and considered an important mechanism to achieve reproductive isolation. In this study, we investigated the origin of the flowering plant species Sempervivum tectorum in the Massif Central (France) through homoploid hybridization between lineages of the species from the Rhine Gorge area (Germany) and the Pyrenees (France). We used genotyping-by-sequencing genetic data as evidence for the hybrid origin of the Massif Central lineage, and WorldClim climatic data and soil pH and soil temperature data collected by us for ecological niche and species distribution modelling. We could show that the Massi…

0106 biological sciences0301 basic medicineReproductive IsolationClimate ChangeLineage (evolution)NicheAdaptation BiologicalParapatric speciationBiologyCrassulaceaeModels Biological010603 evolutionary biology01 natural sciences570 Life sciences03 medical and health sciencesEcosystemEcology Evolution Behavior and SystematicsEcological nichegeographyPloidiesgeography.geographical_feature_categoryMassifReproductive isolationEnvironmental niche modellingEuropePhylogeography030104 developmental biologyEvolutionary biologySympatric speciationHybridization Genetic570 BiowissenschaftenJournal of Evolutionary Biology
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Thioredoxin (Trxo1) interacts with proliferating cell nuclear antigen (PCNA) and its overexpression affects the growth of tobacco cell culture.

2017

Thioredoxins (Trxs), key components of cellular redox regulation, act by controlling the redox status of many target proteins, and have been shown to play an essential role in cell survival and growth. The presence of a Trx system in the nucleus has received little attention in plants, and the nuclear targets of plant Trxs have not been conclusively identified. Thus, very little is known about the function of Trxs in this cellular compartment. Previously, we studied the intracellular localization of PsTrxo1 and confirmed its presence in mitochondria and, interestingly, in the nucleus under standard growth conditions. In investigating the nuclear function of PsTrxo1 we identified proliferati…

0106 biological sciences0301 basic medicineTFs transcription factorsOverexpressionBiologíaBiFC bimolecular fluorescence complementationClinical BiochemistryCell Culture TechniquesTobacco BY-2 cells01 natural sciencesBiochemistryTBY-2 tobacco bright yellow-2DTT 14-dithiothreitolBimolecular fluorescence complementationThioredoxinsGene Expression Regulation PlantTrx thioredoxinlcsh:QH301-705.5GFP green fluorescent proteinlcsh:R5-920biologyProliferating cell nuclear antigen (PCNA)Cell cycleGlutathione3. Good healthCell biologyMitochondriaNTR NADPH thioredoxin reductaseProtein TransportDEM diethyl maleateRT-qPCR Reverse transcription quantitative polymerase chain reactionThioredoxinlcsh:Medicine (General)Oxidation-ReductionAMS 4-acetamido-4-maleimidylstilbene-22-disulfonic acidResearch PaperPCNA proliferating cell nuclear antigenOex overexpressingCell cycleNucleusThioredoxin o103 medical and health sciencesROS reactive oxygen speciesDownregulation and upregulationProliferating Cell Nuclear AntigenTobaccoDAPI 46-diamidine-2-phenylindolmCBM monochlorobimaneCellular compartmentCell NucleusCell growthOrganic ChemistryBotánicaPeasMolecular biologyYFP yellow fluorescent proteinProliferating cell nuclear antigenTBS Tris-buffered salineOD optical density030104 developmental biologylcsh:Biology (General)Cell cultureRNA reactive nitrogen speciesbiology.proteinPrx peroxiredoxinBSA bovine serum albumin010606 plant biology & botanyRedox biology
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Temperature and pH define the realised niche space of arbuscular mycorrhizal fungi

2021

Made available in DSpace on 2021-06-25T11:52:41Z (GMT). No. of bitstreams: 0 Previous issue date: 2021-03-04 European Regional Development Fund (Centre of Excellence EcolChange) University of Tartu (Estonian Research Council ) Moscow State University Natural Sciences and Engineering Research Council of Canada Discovery Grant Russian Science Foundation Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP) Swedish Research Council (Vetenskapsradet) The arbuscular mycorrhizal (AM) fungi are a globally distributed group of soil organisms that play critical roles in ecosystem function. However, the ecological niches of individual AM fungal taxa are poorly understood. We collected > 300 s…

0106 biological sciences0301 basic medicinearbuscular mycorrhizal fungi ecological niche molecular taxa niche optimum niche width pH phylogenetic correlation temperature Ecosystem Fungi Hydrogen-Ion Concentration Phylogeny Soil Soil Microbiology Temperature MycorrhizaePhylogéniePhysiologyPlant Science01 natural sciencesSoilhttp://aims.fao.org/aos/agrovoc/c_5963http://aims.fao.org/aos/agrovoc/c_33550MycorrhizaePhylogenySoil MicrobiologyAbiotic componentbiologyEcologypHTemperatureHydrogen-Ion ConcentrationPhytoécologieniche widthTempérature du solpH de la rhizosphèreF40 - Écologie végétaleAcaulosporaceaeNichearbuscular mycorrhizal fungi03 medical and health scienceshttp://aims.fao.org/aos/agrovoc/c_1415699873241Glomeraceaeecological nichehttp://aims.fao.org/aos/agrovoc/c_13325Relative species abundanceChampignon du solArbuscular mycorrhiza [EN]EcosystemEcological nichehttp://aims.fao.org/aos/agrovoc/c_5b384c25phylogenetic correlationFungiP34 - Biologie du solmolecular taxatemperatureAquatic Ecologyfacteurs abiotiques15. Life on landbiology.organism_classificationniche optimum030104 developmental biology13. Climate actionBiological dispersalhttp://aims.fao.org/aos/agrovoc/c_7197http://aims.fao.org/aos/agrovoc/c_36313010606 plant biology & botanyGigasporaceae
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Evolutionary history of two cryptic species of northern African jerboas

2020

Abstract Background: Climatic variation and geologic change both play significant roles in shaping species distributions, thus affecting their evolutionary history. In Sahara-Sahel, climatic oscillations shifted the desert extent during the Pliocene-Pleistocene interval, triggering the diversification of several species. Here, we investigated how these biogeographical and ecological events have shaped patterns of genetic diversity and divergence in African Jerboas, desert specialist rodents. We focused on two sister and cryptic species, Jaculus jaculus and J. hirtipes, where we (1) evaluated their genetic differentiation, (2) reconstructed their evolutionary and demographic history; (3) tes…

0106 biological sciences0301 basic medicinereproductive isolationSpeciation01 natural sciencesGene flowSahara-SahelJaculus jaculusAfrica NorthernPhylogenysopeutumineneducation.field_of_studycryptic diversityDesertsEcologyReproductive isolationBiological EvolutionphylogeneticsaavikotPhylogeneticsPhylogeographylocal adaptationympäristönmuutoksetResearch ArticleDemographic historySpecies complexEvolutionjyrsijätGenetic SpeciationCryptic diversityLocal adaptationPopulationRodentiaBiologydesertsEnvironment010603 evolutionary biologyDNA MitochondrialAfrican jerboas03 medical and health sciencesQH359-425AnimalseducationEcology Evolution Behavior and SystematicsEcosystemLocal adaptationEcological nicheGenetic diversityfylogenetiikkaGenetic Variation15. Life on landbiology.organism_classificationaavikkojerbotdemographic historyReproductive isolation030104 developmental biologyspeciationHaplotypesEvolutionary biologyJaculuslajiutuminen
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Methanotrophs are core members of the diazotroph community in decaying Norway spruce logs

2018

Dead wood is initially a nitrogen (N) poor substrate, where the N content increases with decay, partly due to biological N2 fixation, but the drivers of the N accumulation are poorly known. We quantified the rate of N2 fixation in decaying Norway spruce logs of different decay stages and studied the potential regulators of the N2-fixation activity. The average rate for acetylene reduction in the decaying wood was 7.5 nmol ethylene g−1d−1, which corresponds to 52.9 μg N kg−1d−1. The number of nifH copies (g−1 dry matter) was higher at the later decay stages, but no correlation between the copy number and the in vitro N2 fixation rate was found. All recovered nifH sequences were assigned to t…

0106 biological sciences0301 basic medicineta1172Soil Sciencechemistry.chemical_element010603 evolutionary biology01 natural sciencesMicrobiologyMethane03 medical and health scienceschemistry.chemical_compoundlahoaminenBotanyDry matterlahopuutritsobitdead woodnifHbiologyPicea abiesChemistryta1183coarse woody debrisPicea abiesbiology.organism_classificationNitrogenSubstrate (marine biology)kuusi030104 developmental biologytypensidontaasymbiotic nitrogen fixationNitrogen fixationDiazotrophCoarse woody debrisSoil Biology and Biochemistry
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Herbicidal activity of Thymbra capitata (L.) Cav. essential oil

2020

The bioherbicidal potential of Thymbra capitata (l.) Cav. essential oil (EO) and its main compound carvacrol was investigated. In in vitro assays, the EO blocked the germination and seedling growth of Erigeron canadensis L., Sonchus oleraceus (l.) L., and Chenopodium album L. at 0.125 &micro

0106 biological sciencesAvenaPharmaceutical ScienceIntegrated weed managementSolanum nigrum3101.06 Herbicidas01 natural sciencesAnalytical Chemistrylaw.inventionchemistry.chemical_compoundbioherbicideslawDrug Discovery2302.10 Aceites Esencialesnatural herbicidesCarvacrol0303 health sciencesSetaria verticillatabiologyChenopodium3103.15 Control de MalezasWeed controlSettore AGR/02 - Agronomia E Coltivazioni Erbacee02.- Poner fin al hambre conseguir la seguridad alimentaria y una mejor nutrición y promover la agricultura sostenibleHorticultureChemistry (miscellaneous)Essential oilsintegrated weed managementMolecular Medicineweed controlSettore AGR/13 - Chimica AgrariaBOTANICAcarvacrolPortulacanatural herbicideThymbra capitataessential oilArticlelcsh:QD241-44103 medical and health sciencesBioherbicideslcsh:Organic chemistryCarvacrolOils VolatilePhysical and Theoretical ChemistryAvena fatuaessential oilsEssential oil030304 developmental biologyLamiaceaeHerbicidesOrganic Chemistrybiology.organism_classificationSonchus oleraceuschemistrySeedlingsEchinochloaCapitataNatural herbicides010606 plant biology & botany
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Interspecific variation in the relationship between clutch size, laying date and intensity of urbanization in four species of hole-nesting birds

2016

Marie Vaugoyeau [et al.]

0106 biological sciencesAvian clutch size010504 meteorology & atmospheric sciencesurban heat island effect01 natural sciencesFicedula hypoleucaorthophotographBreeding phenology orthophotograph passerine birds population dynamics urban heat island effect.Parus major11. Sustainabilitypopulation dynamicspasserine birdsQL_671Original Research[SDV.EE]Life Sciences [q-bio]/Ecology environmenteducation.field_of_studyEcologyPhenologyEcologyCyanistesbreeding phenology;orthophotograph;passerine birds;population dynamics;urban heat island effectoiseau nicheurChemistrydynamique des populationsFicedula albicolliseducationPopulationFicedula albicollisBiology010603 evolutionary biologyEcology and Environment[ SDV.EE ] Life Sciences [q-bio]/Ecology environmentreproductionCyanistes caeruleusoiseaueducationBiologyNest boxEcology Evolution Behavior and Systematics0105 earth and related environmental sciencesNature and Landscape ConservationBreeding phenologyEkologiParus[ SDE.BE ] Environmental Sciences/Biodiversity and EcologyurbanisationEnvironmental and SocietyFicedulabiology.organism_classificationpopulaatiodynamiikkaSettore AGR/11 - Entomologia Generale E Applicata13. Climate actionta1181Environnement et Société[SDE.BE]Environmental Sciences/Biodiversity and EcologyZoology
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Traits mediate niches and co‐occurrences of forest beetles in ways that differ among bioclimatic regions

2021

Aim The aim of this study was to investigate the role of traits in beetle community assembly and test for consistency in these effects among several bioclimatic regions. We asked (1) whether traits predicted species’ responses to environmental gradients (i.e. their niches), (2) whether these same traits could predict co-occurrence patterns and (3) how consistent were niches and the role of traits among study regions. Location Boreal forests in Norway and Finland, temperate forests in Germany. Taxon Wood-living (saproxylic) beetles. Methods We compiled capture records of 468 wood-living beetle species from the three regions, along with nine morphological and ecological species traits. Eight …

0106 biological sciencesBayesian joint species distribution models (JSDMs)Species distributionMODELSDead woodClimate changeUNCERTAINTYphylogeny010603 evolutionary biology01 natural sciencesPhylogeneticsSPECIES DISTRIBUTIONDISTRIBUTIONSsaproxylic beetlesenvironmental gradientsEcology Evolution Behavior and SystematicsEcological nichekovakuoriaisetSAPROXYLIC BEETLESfylogeniaEcologyEcology010604 marine biology & hydrobiologybayesilainen menetelmäBIOTIC INTERACTIONSBayesian joint species distribution models (JSDMs); climate change; Coleoptera; ecological traits; environmental gradients; HMSC; morphological traits; phylogeny; saproxylic beetles; species associations15. Life on landilmastonmuutoksetecological traitsspecies associationsHMSCekologinen lokeroColeopteraGeographyclimate changeFUNCTIONAL TRAITS1181 Ecology evolutionary biologymorphological traitsPATTERNSDEAD-WOODympäristönmuutoksetRESPONSES
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Revision of the pentacrinid stalked crinoids of the genus Endoxocrinus (Echinodermata, Crinoidea), with a study of environmental control of character…

2006

A revision of the stalked crinoid species attributed to the genus Endoxocrinus A.H. Clark, 1908 (Diplocrininae, Pentacrinitidae, Crinoidea, Echinodermata) is conducted using studies on phenotype variation and its relation with environment. Specimens collected via submersible at five sites in the Bahamas exhibit distinct phenotypes that correlate with different apparent ecological niches and serve as references for interpreting specimens dredged in Atlantic and Pacific Oceans where detailed information on their benthic environment is unknown. Documentation of ecophenotypic convergences or divergences allows us to distinguish between adaptive characters and those revealing genetic affinities,…

0106 biological sciencesBiogeographyAllopatric speciationDiplocrinus[SDV.BID]Life Sciences [q-bio]/BiodiversityBiologySubspeciesTropical Atlantic[SDV.BID.SPT]Life Sciences [q-bio]/Biodiversity/Systematics Phylogenetics and taxonomy010603 evolutionary biology01 natural sciencestaxonomyAnnacrinus14. Life underwaterEndoxocrinusbiogeographyEcology Evolution Behavior and Systematics[ SDV.BID ] Life Sciences [q-bio]/BiodiversityEcological nichemodelEcology010604 marine biology & hydrobiologyphenotypesCrinoidbiology.organism_classificationdeep-sea expeditionsstalked crinoidsFloridaAnimal Science and ZoologyTaxonomy (biology)Subgenus[ SDV.BID.SPT ] Life Sciences [q-bio]/Biodiversity/Systematics Phylogenetics and taxonomy[SDV.BID] Life Sciences [q-bio]/BiodiversityEchinodermataZootaxa
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2018

0106 biological sciencesBiomass (ecology)010504 meteorology & atmospheric sciencesRenewable Energy Sustainability and the EnvironmentPublic Health Environmental and Occupational HealthAtmospheric sciences010603 evolutionary biology01 natural sciencesEl Niño Southern OscillationmedicineEnvironmental sciencemedicine.symptomVegetation (pathology)0105 earth and related environmental sciencesGeneral Environmental ScienceEnvironmental Research Letters
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