Search results for " Organism"

showing 10 items of 541 documents

Reconstruction of the evolutionary history of Saccharomyces cerevisiae x S. kudriavzevii hybrids based on multilocus sequence analysis.

2012

In recent years, interspecific hybridization and introgression are increasingly recognized as significant events in the evolution of Saccharomyces yeasts. These mechanisms have probably been involved in the origin of novel yeast genotypes and phenotypes, which in due course were to colonize and predominate in the new fermentative environments created by human manipulation. The particular conditions in which hybrids arose are still unknown, as well as the number of possible hybridization events that generated the whole set of natural hybrids described in the literature during recent years. In this study, we could infer at least six different hybridization events that originated a set of 26 S…

Evolutionary Geneticslcsh:MedicineYeast and Fungal ModelsWineSaccharomycesGenomeSouth AfricaNatural SelectionFungal EvolutionDNA FungalMycological Typing Techniqueslcsh:ScienceGenome EvolutionPhylogenyRecombination GeneticGeneticsMultidisciplinarybiologyfood and beveragesGenomicsBiological EvolutionEuropePhylogeographyPloidyResearch ArticleGenome evolutionEvolutionary ProcessesGenotypeGenes FungalIntrogressionGenomicsMycologySaccharomyces cerevisiaeMicrobiologySaccharomycesModel OrganismsPhylogeneticsGeneticsHumansAdaptationBiologyHybridizationHybridEvolutionary BiologyPloidiesChimeralcsh:RComparative GenomicsSouth Americabiology.organism_classificationYeastGenetic Polymorphismlcsh:QPopulation GeneticsMultilocus Sequence TypingPLoS ONE
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Use of functional genes to quantify denitrifiers in the environment.

2006

During the last decade, application of molecular methods using cultivation-independent approaches has provided new insights into the composition and structure of denitrifying communities in various environments. However, little is known about their abundance, and quantification is still performed using cultivation-based approaches, which are not only biased by the inability to cultivate of many micro-organisms but also fastidious and time-consuming. Two types of cultivation-independent approaches have recently been developed to quantify denitrifiers. The first type, which is based on the hybridization technique, comprises the use of Southern hybridization and DNA arrays. The second type, ba…

Fastidious organismNitratesEcologyNucleic Acid HybridizationFunctional genesComputational biologyBiologyEnvironmentBiochemistryPolymerase Chain ReactionCompetitive pcrlaw.inventionlawMost probable numberGenes BacterialPolymerase chain reactionNitritesSoil MicrobiologySouthern blotOligonucleotide Array Sequence AnalysisBiochemical Society transactions
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Advances in detection of fastidious bacteria: From microscopic observation to molecular biosensors

2019

Abstract Identification of pathogens and diagnosis of infections are important health challenges, especially in the case of fastidious bacteria which are those difficult-to-grow. A fastidious organism is any organism that has a complex nutritional requirement. Additionally, a fastidious microorganism will only grow when specific nutrients are included in the culture medium. These bacteria can cause serious diseases whose detection and monitoring is critical in many cases. The oldest detection methods are based on simple microscopy observation and staining, after culture on selective growth media, but often do not provide a clear answer. Some new molecular approaches, such as DNA-based seque…

Fastidious organismbiology010401 analytical chemistrybiology.organism_classification01 natural sciences0104 chemical sciencesAnalytical ChemistryMicroscopic observationMicrobiologyIdentification (biology)Simple MicroscopySpectroscopyOrganismBacteriaTrAC Trends in Analytical Chemistry
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Influencia del tiempo de ligadura del cordón umbilical en la morbilidad secundaria neonatal, los depósitos de hierro en el neonato y lactante, y efec…

2018

Se pretende realizar una divulgación básica de la investigación en ciencias de la salud en la primera parte. Posteriormente se explica el estudio realizado. Dos grupos aleatorizados de pinzamiento precoz y tardío de cordón umbilical y descripción de los resultados y las posibles repercusiones en la criatura nacida y en las madres

Fetal blood.Hemorragia materna pospartoPinzamiento de cordón umbilicalAnemia en el embarazo.Anemia in pregnancy.Hierro en el organismo.Policitemia secundariaCordón umbilical.Anemia ferropénica.Niños recién nacidos.Iron in the body.Hiperbilirrubinemia neonatal:CIENCIAS MÉDICAS [UNESCO]Anemia neonatalSangre fetal.UNESCO::CIENCIAS MÉDICASNewborn infants.Ferropenic anemia.Embarazo - Complicaciones y secuelas.Umbilical cord.Pregnancy - Complications.
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Much can change in a year: The massawan mantis shrimp, erugosquilla massavensis (Kossmann, 1880) in sicily, Italy

2019

A flourishing population of the Massawan mantis shrimp, Erugosquilla massavensis, an Erythraean species, is recorded off Sicily, Italy, one year after the very first specimen was collected off the eastern coast of the island. The species is already established as a minor, albeit valuable, fishery resource. Once its population increases, however, it may compete with the native Mediterranean spot-tail mantis shrimp, Squilla mantis. This article presents the results of a joint effort between members of the Museo Civico di Storia Naturale of Comiso and local fishermen to monitor non-indigenous species in Sicilian waters.

Fisheries -- Italy -- SicilyArthropodaDistribution (economics)Introduced speciesDistributionPopulation dynamicPopulation densityInvasive speciesErugosquillaMantis shrimpShrimps -- Italy -- SicilySquilla -- Italy -- SicilyMalacostracaSquillidaeEcology Evolution Behavior and SystematicsbiologyCompetitionEcologybusiness.industrybiology.organism_classificationShrimp populations -- Italy -- SicilyEcology Evolution Behavior and SystematicFisheryGeographyIntroduced organisms -- Italy -- SicilyFishery resourceSquilla mantis -- Italy -- SicilybusinessInvasive alien specieSquilla manti
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Spatial Distribution of Fungal Communities in an Arable Soil.

2015

Fungi are prominent drivers of ecological processes in soils, so that fungal communities across different soil ecosystems have been well investigated. However, for arable soils taxonomically resolved fine-scale studies including vertical itemization of fungal communities are still missing. Here, we combined a cloning/Sanger sequencing approach of the ITS/LSU region as marker for general fungi and of the partial SSU region for arbuscular mycorrhizal fungi (AMF) to characterize the microbiome in different maize soil habitats. Four compartments were analyzed over two annual cycles 2009 and 2010: a) ploughed soil in 0-10 cm, b) rooted soil in 40-50 cm, c) root-free soil in 60-70 cm soil depth a…

Fungal StructureSoil ScienceSequence Databaseslcsh:MedicineCropsMycologyResearch and Analysis MethodsSoilDatabase and Informatics MethodsModel OrganismsPlant and Algal ModelsGrassesMolecular Biology TechniquesSequencing Techniqueslcsh:ScienceMolecular BiologySoil MicrobiologyEcologyMicrobiotaEcology and Environmental Scienceslcsh:ROrganismsFungiCorrectionBiology and Life SciencesAgricultureSoil EcologyPlantsYeastMaizeBiological DatabasesCommunity Ecologylcsh:QSequence AnalysisResearch ArticleCloningCrop ScienceCereal CropsPLoS ONE
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A Target-Based In Vivo Test System to Identify Novel Fungicides with Mode of Action in the HOG Pathway

2021

Resistance management plays a key role in modern plant protection. There is a growing need to identify new fungicide targets and new modes of action. In this context, it is also mandatory to find new compounds acting on successful target locations. For the latter, so-called target-site-specific test systems emerged to search for inhibitors. Most of them are based on in vitro assays, in which interaction between a compound and a purified target protein is demonstrated. Consequently, getting essential information about potentially toxic effects in the living cell or in the whole organism is not possible. Thus, we present a fluorescent-labelled mutant strain of the rice blast fungus Magnaporth…

FungicideMagnaporthe oryzaeIn vivoIn vitro toxicologyContext (language use)Target proteinComputational biologyBiologyMode of actionWhole Organism
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From non-excitable single-cell to multicellular bioelectrical states supported by ion channels and gap junction proteins: Electrical potentials as di…

2019

Endogenous bioelectric patterns within tissues are an important driver of morphogenesis and a tractable component of a number of disease states. Developing system-level understanding of the dynamics by which non-neural bioelectric circuits regulate complex downstream cascades is a key step towards both, an evolutionary understanding of ion channel genes, and novel strategies in regenerative medicine. An important capability gap is deriving rational modulation strategies targeting individual cells' bioelectric states to achieve global (tissue- or organ-level) outcomes. Here, we develop an ion channel-based model that describes multicellular states on the basis of spatio-temporal patterns of …

Gap Junction Proteins030303 biophysicsCellBiophysicsCell CommunicationRegenerative medicineModels BiologicalConnexinsIon ChannelsCell membrane03 medical and health sciencesmedicineMorphogenesisAnimalsHumansMolecular BiologyIon channelPhysics0303 health sciencesCell potentialElectrical potentialsGap JunctionsElectrophysiological PhenomenaMulticellular organismmedicine.anatomical_structureSingle-Cell AnalysisNeuroscienceSignal TransductionProgress in biophysics and molecular biology
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Overexpression of TGF-ß1 in macrophages reduces and stabilizes atherosclerotic plaques in ApoE-deficient mice.

2011

Although macrophages represent the hallmark of both human and murine atherosclerotic lesions and have been shown to express TGF-ß1 (transforming growth factor β1) and its receptors, it has so far not been experimentally addressed whether the pleiotropic cytokine TGF-ß1 may influence atherogenesis by a macrophage specific mechanism. We developed transgenic mice with macrophage specific TGF-ß1 overexpression, crossed the transgenics to the atherosclerotic ApoE (apolipoprotein E) knock-out strain and quantitatively analyzed both atherosclerotic lesion development and composition of the resulting double mutants. Compared with control ApoE(-/-) mice, animals with macrophage specific TGF-ß1 overe…

Genetically modified mouseApolipoprotein Emedicine.medical_specialtyPathologyHistologyMouseSciencemedicine.medical_treatmentImmune CellsImmunologyAntigen-Presenting CellsMice TransgenicBiologyCardiovascularLesionTransforming Growth Factor beta1MiceApolipoproteins EModel OrganismsVascular BiologyInternal medicinemedicineGeneticsMacrophageAnimalsReceptorBiologyMice KnockoutMultidisciplinaryMacrophagesQRAnimal ModelsAtherosclerosisImmunohistochemistryPlaque AtheroscleroticCytokineEndocrinologyImmunohistochemistryMedicineFemalemedicine.symptomGene FunctionTransforming growth factorResearch ArticlePloS one
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Mutated cylindromatosis gene affects the functional state of dendritic cells

2010

Cylindromatosis gene (CYLD) is a ubiquitously expressed deubiquitinating enzyme, which interacts with members of the NF-κB signaling pathway and attenuates NF-κB and JNK signaling. Here, we report that DC derived from transgenic mice, which solely express a naturally occurring CYLD isoform (CYLD(ex7/8)), display a higher content of nuclear RelB and express elevated levels of NF-κB family members as well as of known NF-κB-target genes comprising costimulatory molecules and pro-inflammatory cytokines, as compared with WT DC. Accordingly, unstimulated CYLD(ex7/8) DC exhibited a significantly higher primary allogenic T-cell stimulatory capacity than WT DC and exerted no tolerogenic activity. Tr…

Genetically modified mouseTransgeneBlotting WesternImmunologyMice TransgenicBiologyDexamethasoneDeubiquitinating enzymeSmall hairpin RNAMiceImmune ToleranceAnimalsImmunology and AllergyGlucocorticoidsMice KnockoutReverse Transcriptase Polymerase Chain ReactionTumor Suppressor ProteinsRELBTranscription Factor RelBNF-kappa BPeripheral toleranceCell DifferentiationDendritic CellsFlow CytometrySpecific Pathogen-Free OrganismsCell biologyIsoenzymesTranscription Factor AP-1MutationKnockout mouseImmunologybiology.proteinRNAFemaleSignal transductionSignal TransductionEuropean Journal of Immunology
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