Search results for " Regulation"

showing 10 items of 3187 documents

Pharmacogenomic identification of small molecules for lineage specific manipulation of subventricular zone germinal activity

2017

Strategies for promoting neural regeneration are hindered by the difficulty of manipulating desired neural fates in the brain without complex genetic methods. The subventricular zone (SVZ) is the largest germinal zone of the forebrain and is responsible for the lifelong generation of interneuron subtypes and oligodendrocytes. Here, we have performed a bioinformatics analysis of the transcriptome of dorsal and lateral SVZ in early postnatal mice, including neural stem cells (NSCs) and their immediate progenies, which generate distinct neural lineages. We identified multiple signaling pathways that trigger distinct downstream transcriptional networks to regulate the diversity of neural cells …

animal diseasesGene Identification and AnalysisGenetic NetworksAPC-PAIDMiceNeural Stem CellsCell SignalingLateral VentriclesDatabases GeneticGene Regulatory NetworksBiology (General)WNT Signaling CascadeNotch SignalingOrganic CompoundsBB/M029379/1GenomicsSignaling CascadesOligodendrogliaChemistryBBSRCPhysical Sciences[SDV.NEU]Life Sciences [q-bio]/Neurons and Cognition [q-bio.NC]Network AnalysisNeurovetenskaperSignal TransductionResearch ArticleBiotechnologyComputer and Information SciencesSignal InhibitionQH301-705.5NeurogenesisResearch and Analysis MethodsSmall Molecule LibrariesGenetics/dk/atira/pure/core/subjects/biomedicalsciencesAnimalsAdultsCell LineageComputer Simulation[SDV.NEU] Life Sciences [q-bio]/Neurons and Cognition [q-bio.NC]Molecular Biology TechniquesMolecular BiologyOrganic ChemistryGene MappingChemical CompoundsNeurosciencesBiology and Life SciencesRCUKBiomedical SciencesCell BiologyNerve RegenerationSignaling NetworksGene Expression Regulationnervous systemSmall MoleculesAge GroupsPeople and PlacesPopulation GroupingsTranscriptome
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Molecular mechanisms of primary and secondary mucosal immunity using avian infectious bronchitis virus as a model system

2007

Although mucosal immune responses are critical for protection of hosts from clinical illness and even mortality caused by mucosal pathogens, the molecular mechanism of mucosal immunity, which is independent of systemic immunity, remains elusive. To explore the mechanistic basis of mucosal protective immunity, gene transcriptional profiling in mucosal tissues was evaluated after the primary and secondary immunization of animals with an attenuated avian infectious bronchitis virus (IBV), a prototype of Coronavirus and a well-characterized mucosal pathogen. Results showed that a number of innate immune factors including toll-like receptors (TLRs), retinoic-acid-inducible gene-1 (RIG-1), type I…

animal diseasesRespiratory Tract DiseasesLymphocyte Activationmedicine.disease_causeDC dendritic cellMucosal immunityCXCR chemokine (C-X-C motif) receptorCCR chemokine (C-C motif) receptorOligonucleotide Array Sequence AnalysisCoronavirusbiologyReverse Transcriptase Polymerase Chain ReactionAcquired immune systemSpecific Pathogen-Free OrganismsCytokinesAntibodyAvian infectious bronchitis virusCoronavirus InfectionsIBV infectious bronchitis virusInfectious bronchitis virusImmunologychemical and pharmacologic phenomenaArticlePrimary and secondary immunityMolecular mechanismIBVTranscriptional regulationImmune systemImmunitymedicineAnimalsIFN interferonTLR toll-like receptorImmunity MucosalPoultry DiseasesInnate immune systemGeneral VeterinaryGene Expression ProfilingComplement System ProteinsTh1 Cellsbiochemical phenomena metabolism and nutritionCTL cytotoxic T lymphocytebiology.organism_classificationIg immunoglobulinIL interleukinMucosal immunologyImmunologybiology.proteinRNAbacteriaImmunizationChickensVeterinary Immunology and Immunopathology
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Intraflagellar transport protein 172 is essential for primary cilia formation and plays a vital role in patterning the mammalian brain

2008

AbstractIFT172, also known as Selective Lim-domain Binding protein (SLB), is a component of the intraflagellar transport (IFT) complex. In order to evaluate the biological role of the Ift172 gene, we generated a loss-of-function mutation in the mouse. The resulting Slb mutant embryos die between E12.5 and 13.0, and exhibit severe cranio-facial malformations, failure to close the cranial neural tube, holoprosencephaly, heart edema and extensive hemorrhages. Cilia outgrowth in cells of the neuroepithelium is initiated but the axonemes are severely truncated and do not contain visible microtubules. Morphological and molecular analyses revealed a global brain-patterning defect along the dorsal–…

animal structuresBody PatterningNodal ProteinSlbNodalBiologyArticleMiceFGF8Intraflagellar transportHoloprosencephalymedicineMHB boundaryAnimalsHedgehog ProteinsRNA MessengerCiliaNodeMolecular BiologyAdaptor Proteins Signal TransducingBody PatterningGeneticsMammalsCell DeathCiliumEndodermNeural tubeIntracellular Signaling Peptides and ProteinsBrainGene Expression Regulation DevelopmentalCell BiologyEmbryo MammalianCell biologyNeuroepithelial cellGastrulationCytoskeletal Proteinsmedicine.anatomical_structurePhenotypeIFT172Gene Targetingembryonic structuresNODALBiomarkersGene DeletionDevelopmental BiologySignal TransductionDevelopmental Biology
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Prediction model for aneuploidy in early human embryo development revealed by single-cell analysis.

2014

Aneuploidies are prevalent in the human embryo and impair proper development, leading to cell cycle arrest. Recent advances in imaging and molecular and genetic analyses are postulated as promising strategies to unveil the mechanisms involved in aneuploidy generation. Here we combine time-lapse, complete chromosomal assessment and single-cell RT–qPCR to simultaneously obtain information from all cells that compose a human embryo until the approximately eight-cell stage (n=85). Our data indicate that the chromosomal status of aneuploid embryos (n=26), including those that are mosaic (n=3), correlates with significant differences in the duration of the first mitotic phase when compared with e…

animal structuresCellular differentiationGeneral Physics and AstronomyAneuploidyBiologyModels BiologicalGeneral Biochemistry Genetics and Molecular BiologyArticleTranscriptomeSingle-cell analysismedicineHumansGenetic TestingMitosisCell ProliferationGeneticsMultidisciplinaryGene Expression ProfilingGene Expression Regulation DevelopmentalEmbryoCell DifferentiationGeneral Chemistrymedicine.diseaseAneuploidyGene expression profilingembryonic structuresPloidyNature communications
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Evidence for differential and redundant function of the Sox genes Dichaete and SoxN during CNS development in Drosophila.

2002

Group B Sox-domain proteins encompass a class of conserved DNA-binding proteins expressed from the earliest stages of metazoan CNS development. In all higher organisms studied to date, related Group B Sox proteins are co-expressed in the developing CNS; in vertebrates there are three (Sox1, Sox2 and Sox3) and in Drosophila there are two (SoxNeuro and Dichaete). It has been suggested there may be a degree of functional redundancy in Sox function during CNS development. We describe the CNS phenotype of a null mutation in the Drosophila SoxNeuro gene and provide the first direct evidence for both redundant and differential Sox function during CNS development in Drosophila. In the lateral neuro…

animal structuresEmbryo NonmammalianMutantBiologyNervous SystemSOX Transcription FactorsSOX1NeuroblastSOX2Species SpecificityEctodermAnimalsDrosophila ProteinsMolecular BiologySOX Transcription FactorsGeneticsNeuroectodermHigh Mobility Group ProteinsGene Expression Regulation DevelopmentalPhenotypeNull alleleDNA-Binding ProteinsDrosophila melanogasterMutagenesisembryonic structuresVertebratesDevelopmental BiologyTranscription FactorsDevelopment (Cambridge, England)
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Molecular markers for identified neuroblasts in the developing brain of Drosophila.

2003

The Drosophila brain develops from the procephalic neurogenic region of the ectoderm. About 100 neural precursor cells (neuroblasts) delaminate from this region on either side in a reproducible spatiotemporal pattern. We provide neuroblast maps from different stages of the early embryo (stages 9, 10 and 11, when the entire population of neuroblasts has formed), in which about 40 molecular markers representing the expression patterns of 34 different genes are linked to individual neuroblasts. In particular, we present a detailed description of the spatiotemporal patterns of expression in the procephalic neuroectoderm and in the neuroblast layer of the gap genes empty spiracles, hunchback, hu…

animal structuresFasciclin 2EctodermBiologyNeuroblastmedicineMorphogenesisAnimalsDrosophila ProteinsMolecular BiologyGap geneIn Situ HybridizationGeneticsHomeodomain ProteinsNeuronsNeuroectodermfungiGenes HomeoboxBrainGene Expression Regulation DevelopmentalNuclear ProteinsNeuromereCell biologyDNA-Binding Proteinsmedicine.anatomical_structureDrosophila melanogasternervous systemembryonic structuresTrans-ActivatorsHomeotic geneGanglion mother cellBiomarkersDevelopmental BiologyDevelopment (Cambridge, England)
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Achievement of thermotolerance through hsps phosphorylation in sea urchin embryos.

1995

TPA treatment of sea urchin embryos is able to induce thermotolerance. Evidence is provided that TPA treatment induces phosphorylation of a constitutive stress protein of 38 KDa.

animal structuresHot Temperatureintegumentary systemTrough (geology)Cell BiologyGeneral MedicineSea urchin embryoBiologyCell biologySea Urchinsembryonic structuresBotanyPhosphorylationAnimalsTetradecanoylphorbol AcetateElectrophoresis Gel Two-DimensionalFemalePhosphorylationHeat-Shock ProteinsBody Temperature RegulationCell biology international
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Context-dependent Pax-5 repression of a PU.1/NF-κB regulated reporter gene in B lineage cells

2001

Enhancers located in the 3' end of the locus in part regulate immunoglobulin heavy chain (IgH) gene expression. One of these enhancers, HS 1,2, is developmentally regulated by DNA binding proteins like NF-kappaB, Pax-5 and the protein complex NF-alphaP in B lineage cells. Here we report that NF-alphaP is the ets protein PU.1. A glutathione-S-transferase (GST)-pulldown assay demonstrated that PU.1 can physically interact with NF-kappaB in solution. Experiments in COS cells showed that PU.1 and NF-kappaB (p50/c-Rel) can activate transcription of an enhancer linked reporter gene. The paired domain protein Pax-5 has previously been shown to repress enhancer-dependent transcription. Additional c…

animal structuresLymphomaTranscription GeneticEnhancer RNAsBiologyDNA-binding proteinMiceSOX4Genes ReporterTranscription (biology)CricetinaeProto-Oncogene ProteinsGene expressionGeneticsAnimalsCell LineageBinding siteEnhancerCells CulturedB-LymphocytesReporter geneNF-kappa BPAX5 Transcription FactorNuclear ProteinsGeneral MedicineMolecular biologyGlobinsDNA-Binding ProteinsEnhancer Elements GeneticGene Expression RegulationCOS Cellsembryonic structuresTrans-ActivatorsTranscription FactorsGene
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Regulatory sequences driving expression of the sea urchin Otp homeobox gene in oral ectoderm cells.

2005

Abstract PlOtp (Orthopedia), a homeodomain-containing transcription factor, has been recently characterized as a key regulator of the morphogenesis of the skeletal system in the embryo of the sea urchin Paracentrotus lividus . Otp acts as a positive regulator in a subset of oral ectodermal cells which transmit short-range signals to the underlying primary mesenchyme cells where skeletal synthesis is initiated. To shed some light on the molecular mechanisms involved in such a process, we begun a functional analysis of the cis -regulatory sequences of the Otp gene. Congruent with the spatial expression profile of the endogenous Otp gene, we found that while a DNA region from −494 to +358 is s…

animal structuresMesenchymeTransgeneGreen Fluorescent ProteinsEctodermSettore BIO/11 - Biologia MolecolareBiologyGreen fluorescent proteinAnimals Genetically ModifiedEctodermGeneticsmedicineAnimalsRNA MessengerMolecular BiologyGeneTranscription factorSea urchin development Skeletogenesis Orthopedia homeobox gene Oral ectoderm microinjectionHomeodomain ProteinsBase SequenceGenes HomeoboxGene Expression Regulation DevelopmentalDNAMolecular biologyRecombinant Proteinsmedicine.anatomical_structureRegulatory sequenceembryonic structuresParacentrotusHomeoboxDigestive SystemDevelopmental BiologyTranscription FactorsGene expression patterns : GEP
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The pattern of neuroblast formation, mitotic domains and proneural gene expression during early brain development in Drosophila.

2003

In the Drosophila embryo, studies on CNS development have so far mainly focused on the relatively simply structured ventral nerve cord. In the trunk, proneural genes become expressed in small cell clusters at specific positions of the ventral neuroectoderm. A lateral inhibition process mediated by the neurogenic genes ensures that only one cell within each proneural cluster delaminates as a neural stem cell (neuroblast). Thus, a fixed number of neuroblasts is formed, according to a stereotypical spatiotemporal and segmentally repeated pattern, each subsequently generating a specific cell lineage. Owing to higher complexity and hidden segmental organisation, the mechanisms underlying the dev…

animal structuresMitosisProneural genesBiologyNeuroblastLateral inhibitionEctodermMorphogenesisAnimalsCell LineageNeurons AfferentMolecular BiologyIn Situ HybridizationGeneticsNeuronsNeuroectodermGenes HomeoboxBrainGene Expression Regulation DevelopmentalNeural stem cellDrosophila melanogasterVentral nerve cordembryonic structuresScuteNeuroscienceGanglion mother cellNeurogliaBiomarkersDevelopmental BiologyDevelopment (Cambridge, England)
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