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showing 10 items of 2211 documents

Consequences of antigen self-presentation by tumor-specific cytotoxic T cells.

2000

Abstract CDS-positive cytotoxic T cells (CTL) recognize antigenic peptides in combination with major histocompatibility complex (MHC) class I molecules on the surface of syngeneic antigen presenting cells (APC). In the present paper we show that cells from tumor antigen-specific CTL clones present their cognate antigenic peptide to other CTL from the same clone. Inter-CTL peptide presentation resulted in activation of the cells of one CTL clone to MHC-unrestricted lysis of bystander cells. In contrast to the behaviour of this clone, another CTL clone did not lyse bystander cells after incubation with the cognate peptide, but was activated to self-destruction. The human herpes virus Epstein-…

Cytotoxicity ImmunologicAntigen PresentationbiologyT cellImmunologyAntigen presentationchemical and pharmacologic phenomenaHematologyMHC restrictionMajor histocompatibility complexMolecular biologyCTL*medicine.anatomical_structureAntigenHLA-A2 Antigenbiology.proteinmedicineTumor Cells CulturedImmunology and AllergyCytotoxic T cellHumansAntigen-presenting cellCell Line TransformedT-Lymphocytes CytotoxicImmunobiology
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Impact of antigen presentation on TCR modulation and cytokine release: implications for detection and sorting of antigen-specific CD8+ T cells using …

2002

Abstract Soluble MHC class I molecules loaded with antigenic peptides are available either to detect and to enumerate or, alternatively, to sort and expand MHC class I-restricted and peptide-reactive T cells. A defined number of MHC class I/peptide complexes can now be implemented to measure T cell responses induced upon Ag-specific stimulation, including CD3/CD8/ζ-chain down-regulation, pattern, and quantity of cytokine secretion. As a paradigm, we analyzed the reactivity of a Melan-A/MART-1-specific and HLA-A2-restricted CD8+ T cell clone to either soluble or solid-phase presented peptides, including the naturally processed and presented Melan-A/MART-1 peptide AAGIGILTV or the peptide ana…

Cytotoxicity ImmunologicT cellCD8 AntigensImmunologyAntigen presentationReceptors Antigen T-CellDown-RegulationEpitopes T-LymphocyteCD8-Positive T-LymphocytesMHC class IHLA-A2 AntigenmedicineImmunology and AllergyCytotoxic T cellHumansAntigen PresentationPeptide analogbiologyAntigen processingMembrane ProteinsMHC restrictionMolecular biologymedicine.anatomical_structureAmino Acid SubstitutionReceptor-CD3 Complex Antigen T-Cellbiology.proteinMutagenesis Site-DirectedCytokinesCD8Journal of immunology (Baltimore, Md. : 1950)
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Amino acid substitutions at position 97 in HLA-A2 segregate cytolysis from cytokine release in MART-1/Melan-A peptide AAGIGILTV-specific cytotoxic T …

1996

CD8+ T lymphocytes recognize antigenic peptides presented by major histocompatibility complex (MHC) class I molecules. Individual peptide termini appear to be fixed at the C- and N-terminal ends. In contrast, central peptide side chains residues may point in different directions and exhibit limited flexibility, dependent on the MHC class I structural variation. For instance, position 97 in HLA-A201 has been shown to shift individual peptide species into different coordinations, one oriented towards the peptide N terminus, or more towards the C-terminal end. The conformational shape of such non-anchor peptide residues may affect the affinity of MHC/peptide/TCR interaction, resulting in quant…

Cytotoxicity ImmunologicT cellImmunologyPeptide bindingMajor histocompatibility complexMART-1 AntigenAntigens NeoplasmMHC class IHLA-A2 AntigenmedicineTumor Cells CulturedImmunology and AllergyCytotoxic T cellHumansAmino Acid SequencePeptide sequenceMelanomabiologyMHC restrictionMolecular biologyNeoplasm Proteinsmedicine.anatomical_structureBiochemistrybiology.proteinCytokinesCD8Protein BindingT-Lymphocytes CytotoxicEuropean journal of immunology
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Enhanced susceptibility to cytotoxic T lymphocytes without increase of MHC class I antigen expression after conditional overexpression of heat shock …

1999

Antigenic peptides have been found associated with heat shock proteins (HSP) including cytoplasmic HSP70 and heat shock cognate protein 70 as well as the endoplasmic reticulum-resident glucose-regulated protein 94. Recently, HSP70 transfection has been reported to increase MHC class I cell surface expression and antigen presentation on mouse melanoma B16 cells (Wells et al., Int. Immunol. 1998. 10: 609). To analyze the effect of HSP70 on MHC class I cell surface expression and lysability of target cells we transfected a human melanoma cell line with the rat Hsp70-1 gene using the Tet-On system for conditional overexpression of HSP70. Induction of HSP70 did not increase cell surface expressi…

Cytotoxicity ImmunologicT-LymphocytesImmunologyAntigen presentationCD1BiologyMajor histocompatibility complexMajor Histocompatibility ComplexMiceMHC class ITumor Cells CulturedImmunology and AllergyCytotoxic T cellAnimalsHumansHSP70 Heat-Shock ProteinsMelanomaAntigen PresentationAntigen processingMHC class I antigenGene Transfer TechniquesMHC restrictionMolecular biologyRatsGene Expression Regulation Neoplasticbiology.proteinEuropean journal of immunology
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Direct conjugal transfers of Ti plasmid to soil microflora

2002

The bacterial species in soil that can receive a Ti plasmid by conjugation from Agrobacterium spp. were investigated. In order to have direct access to the potential reservoir of Ti plasmid amongst soil microflora, the conjugal system consisting of a multiply auxotrophic derivative of C58 (ST-96-4) and a derivative of pTiC58Delta(acc)R (pSTiEGK) containing a triple antibiotic-resistance cassette in traM was used to transfer the Ti plasmid in a complex soil microflora used as the recipient. Numerous transconjugants were obtained by this method but none was identified as Agrobacterium. This could be explained by the low density of Agrobacterium in the tested soil. As indicated by analysis of …

DNA BacterialAgrobacteriumSequence analysisAuxotrophy[SDV]Life Sciences [q-bio]Molecular Sequence DataMicrobial Sensitivity TestsPolymerase Chain ReactionMicrobiology03 medical and health sciencesTi plasmidRNA Ribosomal 16SGenetics[SDV.BBM] Life Sciences [q-bio]/Biochemistry Molecular Biology[SDV.BBM]Life Sciences [q-bio]/Biochemistry Molecular BiologyEcology Evolution Behavior and SystematicsPhylogenySoil MicrobiologyComputingMilieux_MISCELLANEOUS030304 developmental biologyDNA Primers0303 health sciencesbiologyBase Sequence030306 microbiologyDrug Resistance MicrobialSequence Analysis DNARibosomal RNAbiology.organism_classificationSinorhizobiumConjugation GeneticMicrobial geneticsSoil microbiologyPolymorphism Restriction Fragment LengthPlasmidsRhizobium
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Identification of Carnobacterium, Lactobacillus, Leuconostoc and Pediococcus by rDNA-based techniques

2003

Summary Ribosomal DNA-based techniques including the analysis of profiles generated by ISR amplification, ISR restriction and ARDRA have been evaluated as molecular tools for identifying Carnobacterium, Lactobacillus, Leuconostoc and Pediococcus. They have been applied for the molecular characterization of 91 strains with the following identities: eight Carnobacterium including the eight type species of the genus; 61 Lactobacillus including 40 type strains out of 45 species, 13 Leuconostoc, out of them 11 are type strains and three are subspecies of Lc. mesenteroides; and nine strains representing the six species of genus Pediococcus. The genetic relationship displayed between these species…

DNA BacterialGenotypeMolecular Sequence DataSubspeciesCarnobacteriumGram-Positive BacteriaDNA RibosomalPolymerase Chain ReactionApplied Microbiology and BiotechnologyMicrobiologyMicrobiologyGenusRNA Ribosomal 16SLactobacillusDNA Ribosomal SpacerLeuconostocPediococcusRibosomal DNAPhylogenyEcology Evolution Behavior and SystematicsGeneticsbiologyfood and beveragesGenes rRNASequence Analysis DNAbiology.organism_classificationBacterial Typing TechniquesLactobacillusType speciesFood MicrobiologybacteriaPediococcusLeuconostocPolymorphism Restriction Fragment LengthSystematic and Applied Microbiology
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Genotypic characterization of Bradyrhizobium strains nodulating small Senegalese legumes by 16S-23S rRNA intergenic gene spacers and amplified fragme…

2000

ABSTRACT We examined the genotypic diversity of 64 Bradyrhizobium strains isolated from nodules from 27 native leguminous plant species in Senegal (West Africa) belonging to the genera Abrus , Alysicarpus , Bryaspis , Chamaecrista , Cassia , Crotalaria , Desmodium , Eriosema , Indigofera , Moghania , Rhynchosia , Sesbania , Tephrosia , and Zornia , which play an ecological role and have agronomic potential in arid regions. The strains were characterized by intergenic spacer (between 16S and 23S rRNA genes) PCR and restriction fragment length polymorphism (IGS PCR-RFLP) and amplified fragment length polymorphism (AFLP) fingerprinting analyses. Fifty-three reference strains of the different B…

DNA BacterialGenotypeTECHNIQUE RFLPBACTERIEBiologyDNA RibosomalPolymerase Chain ReactionApplied Microbiology and BiotechnologyBradyrhizobiumPlant MicrobiologyIntergenic regionRNA Ribosomal 16SGenotypeBotanyCluster AnalysisBradyrhizobiumSYMBIOSERibosomal DNA[SDV.EE]Life Sciences [q-bio]/Ecology environmentGeneticsPlants MedicinalEcologyFIXATION BIOLOGIQUE DE L'AZOTELEGUMINEUSEfood and beveragesFabaceaeRibosomal RNAbiology.organism_classificationDNA FingerprintingAmplified Ribosomal DNA Restriction AnalysisSenegalBacterial Typing TechniquesGENOTYPERNA Ribosomal 23S[SDV.EE] Life Sciences [q-bio]/Ecology environmentNODOSITE VEGETALEPOLYMORPHISME GENETIQUEDNA IntergenicAmplified fragment length polymorphismRestriction fragment length polymorphismANALYSE GENETIQUEPolymorphism Restriction Fragment LengthFood ScienceBiotechnology
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Conservation of type III secretion system genes inBradyrhizobiumisolated from soybean

2006

International audience; The distribution of rhcRST genes encoding the type III secretion system (T3SS) in a collection of Bradyrhizobium strains was characterized by PCR and Southern blot hybridization. The polymorphism of the corresponding sequences amplified by PCR was characterized by RFLP and sequencing together with those available in the databank. Genomic group I is characterized by the presence of Bradyrhizobium elkanii strains and group II by the presence of B. japonicum and B. liaoningense strains. Highly conserved T3SS-like genes were detected by PCR in all Bradyrhizobium strains isolated from soybean belonging to genomic group II, and in none of the strains belonging to genomic g…

DNA BacterialGenotyperhc genessinorhizobiumhrc genesMicrobiologyBradyrhizobiummicroorganisme du sollaw.invention03 medical and health scienceslawGeneticsRELATION PLANTE-MICROORGANISMESymbiosisMolecular BiologyGenePhylogenyBradyrhizobium elkaniiPolymerase chain reaction030304 developmental biologySouthern blotGenetics0303 health sciencesBase Sequencebradyrhizobiumbiologymesorhizobium030306 microbiologyGenetic transferbiochemical phenomena metabolism and nutritionRibosomal RNAbiology.organism_classificationtype III secretion system-T3SSRNA BacterialPhenotype[SDV.MP]Life Sciences [q-bio]/Microbiology and ParasitologyGenes BacterialRNA RibosomalbacteriaSoybeansRestriction fragment length polymorphismPolymorphism Restriction Fragment LengthFEMS Microbiology Letters
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Polyphasic study of wine Lactobacillus strains: taxonomic implications

2005

One hundred and seventy-eight lactobacilli isolated from wine were characterized by a polyphasic approach. Strains were phenotypically identified at genus and species level by classical tests including the analysis of cell morphology, homo/heterofermentative character, sugar fermentation patterns, growth at different temperatures and the optical nature of the isomer of lactic acid produced from glucose. Molecular techniques such as random amplification of polymorphic DNA (RAPD), amplified 16S rDNA restriction analysis (16S-ARDRA), PFGE-RFLP and ribotyping were used to characterize strains, and their potential for identification and/or typing was evaluated. The information obtained with thes…

DNA BacterialLactobacillus paracaseiMolecular Sequence Dataved/biology.organism_classification_rank.speciesWineLactobacillus hilgardiiLactobacillus pentosusCell morphologyDNA RibosomalRibotypingMicrobiologyRibotypingRNA Ribosomal 16SLactobacillusVitisEcology Evolution Behavior and SystematicsGeneticsbiologyved/biologyLactobacillus brevisfood and beveragesSequence Analysis DNAGeneral Medicinebiology.organism_classificationBacterial Typing TechniquesElectrophoresis Gel Pulsed-FieldRandom Amplified Polymorphic DNA TechniqueLactobacillusPhenotypeFermentationLactobacillus collinoidesPolymorphism Restriction Fragment LengthLactobacillus plantarumInternational Journal of Systematic and Evolutionary Microbiology
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Effect of natamycin on the enumeration, genetic structure and composition of bacterial community isolated from soils and soybean rhizosphere

2004

Natamycin is commonly used to control fungal growth on agar media used for bacterial enumeration or strain isolation. However, there is no conclusive report on the possible effect of this antibiotic on bacterial growth or on the diversity of the recovered soil bacteria. Therefore, the possible effects of natamycin on the numbers of bacteria isolated at 12 degrees C from three different soils and soybean rhizosphere soil were investigated using natamycin concentrations ranging from 0 to 200 mg l(-1). Our results demonstrate that natamycin concentrations, which inhibit the growth of fungi on the media, have a small but significant inhibitory effect on the number of bacterial colony forming un…

DNA BacterialMicrobiology (medical)Antifungal Agentsfood.ingredientNatamycinRibosomal Intergenic Spacer analysisColony Count MicrobialBacterial growthBiologyPlant RootsMicrobiologyMicrobiologyBacterial genetics03 medical and health sciencesNatamycinfoodRNA Ribosomal 16SDNA Ribosomal SpacermedicineAgar[SDV.MP] Life Sciences [q-bio]/Microbiology and ParasitologyMolecular BiologySoil MicrobiologyComputingMilieux_MISCELLANEOUS030304 developmental biologyPrincipal Component Analysis0303 health sciencesRhizosphereBacteria030306 microbiologyGenetic VariationDNA Restriction Enzymesbiology.organism_classificationDNA Fingerprinting[SDV.MP]Life Sciences [q-bio]/Microbiology and ParasitologySoybeansSoil microbiologyBacteriamedicine.drugJournal of Microbiological Methods
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