Search results for " Simulation"
showing 10 items of 4034 documents
Diffusion of magnetotactic bacterium in rotating magnetic field
2011
Swimming trajectory of a magnetotactic bacterium in a rotating magnetic field is a circle. Random reversals of the direction of the bacterium motion induces a random walk of the curvature center of the trajectory. In assumption of the distribution of the switching events according to the Poisson process the diffusion coefficient is calculated in dependence on the frequency of the rotating field and the characteristic time between the switching events. It is confirmed by the numerical simulation of the random walk of the bacterium in the rotating magnetic field.
Magnetic micro-droplet in rotating field: numerical simulation and comparison with experiment
2017
Magnetic droplets obtained by induced phase separation in a magnetic colloid show a large variety of shapes when exposed to an external field. However, the description of shapes is often limited. Here we formulate an algorithm based on three dimensional boundary-integral equations for strongly magnetic droplets in a high-frequency rotating magnetic field, allowing us to find their figures of equilibrium in three dimensions. The algorithm is justified by a series of comparisons with known analytical results. We compare the calculated equilibrium shapes with experimental observations and find a good agreement. The main features of these observations are the oblate-prolate transition, the flat…
Diffusion in active magnetic colloids
2013
Abstract Properties of active colloids of circle swimmers are reviewed. As a particular example of active magnetic colloids the magnetotactic bacteria under the action of a rotating magnetic field is considered. The relation for a diffusion coefficient due to the random switching of the direction of rotation of their rotary motors is derived on the basis of the master equation. The obtained relation is confirmed by the direct numerical simulation of random trajectory of a magnetotactic bacterium under the action of the Poisson type internal noise due to the random switching of rotary motors. The results obtained are in qualitative and quantitative agreement with the available experimental r…
Parametric excitation of bending deformations of a rod by periodic twist
2013
A model of a semiflexible magnetic filament with magnetization frozen in the direction perpendicular to the tangent of its center line is formulated. It is shown that if the rod is magnetized at its ends in opposite directions, an AC magnetic field causes parametric excitation of bending deformations. Neutral curves of parametric excitation are calculated both analytically and numerically. The shapes arising upon parametric excitation of bending deformations are chiral. Periodic rotation of the chiral filament due to nonhomogeneous twist in a nonhomogeneous AC field causes its unidirectional motion.
Comparison of complex fractionated atrial electrograms at cellular scale using numerical and experimental models.
2010
This study investigates the existence of the pseudo complex fractionated atrial electrogram (CFAE) at cellular level. Our assumptions are based on the fact that CFAEs are linked to the generation of the spiral waves. These are created using a numerical model and an experimental model of in vitro culture of neonatal rats cardiac cells. Pseudo bipolar electrograms resulting from these two models are compared qualitatively and some patterns could be identified as CFAE signature.
Dynamics of Uniaxial Hard Ellipsoids
2007
We study the dynamics of monodisperse hard ellipsoids via a new event-driven molecular dynamics algorithm as a function of volume fraction $\phi$ and aspect ratio $X_0$. We evaluate the translational $D_{trans}$ and the rotational $D_{rot}$ diffusion coefficient and the associated isodiffusivity lines in the $\phi-X_0$ plane. We observe a decoupling of the translational and rotational dynamics which generates an almost perpendicular crossing of the $D_{trans}$ and $D_{rot}$ isodiffusivity lines. While the self intermediate scattering function exhibits stretched relaxation, i.e. glassy dynamics, only for large $\phi$ and $X_0 \approx 1$, the second order orientational correlator $C_2(t)$ sho…
2D simulation of wave-particle coupling inspired by walking droplets
2018
In recent years, a fluid dynamics phenomenon has been observed that shows interesting analogies with several quantum mechanical ones. Under specific experimental conditions, a liquid droplet released on a vibrating liquid persists in jumping, forming a localized wave-particle, and its behaviour resembles that of a de Broglie wave-particle. In this paper we discuss a simplified model for this phenomenon and the results of numerical fluid dynamics simulations implemented on the basis of the model. In spite of the relevant simplifying assumptions of our approach, we observe that a wave-droplet coupling is obtained and the droplet travels at nearly constant velocity, as it is observed in experi…
A numerical study of postshock oscillations in slowly moving shock waves
2003
Abstract Godunov-type methods and other shock capturing schemes can display pathological behavior in certain flow situations. This paper discusses the numerical anomaly associated to slowly moving shocks. We present a series of numerical experiments that illustrate the formation and propagation of this pathology, and allows us to establish some conclusions and question some previous conjectures for the source of the numerical noise. A simple diagnosis on an explicit Steger-Warming scheme shows that some intermediate states in the first time steps deviate from the true direction and contaminate the flow structure. A remedy is presented in the form of a new flux split method with an entropy i…
Three-dimensional numerical simulation of gaseous flow structure in semidetached binaries
1998
The results of 3D hydrodynamic simulation of mass transfer in semidetached binaries of different types (cataclysmic variables and low-mass X-ray binaries) are presented. We find that taking into account of a circumbinary envelope leads to significant changes in the stream-disc morphology. In particular, the obtained steady-state self-consistent solutions show an absence of impact between gas stream from the inner Lagrangian point L1 and forming accretion disc. The stream deviates under the action of gas of circumbinary envelope, and does not cause the shock perturbation of the disc boundary (traditional `hotspot'). At the same time, the gas of circumbinary envelope interacts with the stream…
Simulation of skin reflectance images using 3D tissue modeling and multispectral Monte Carlo light propagation.
2008
In this work we propose a method to simulate the expected, i.e. seen by a camera, multispectral reflectance images of a large skin surface area by combining Monte Carlo light propagation model and realistic tissue modeling based on three dimensional data acquisition of human body areas. In particular, we aim to simulate more accurately light transport in biological tissue by taking into account the geometrical topography of the skin surface, the structure and optical properties of the skin layers, and the subcutaneous veins in presence. We describe our computation method in detail and present simulated reflectance images results.