Search results for " Specificity"

showing 10 items of 2170 documents

Suitability of chloroplast LSU rDNA and its diverse group I introns for species recognition and phylogenetic analyses of lichen-forming Trebouxia alg…

2009

To date, species identification of lichen photobionts has been performed principally on the basis of microscopic examinations and molecular data from nuclear-encoded genes. In plants, the chloroplast genome has been more readily exploited than the nuclear genome for systematic investigations. At the present time, very little information is available about the chloroplast genome of lichen-forming algae. For this reason, we have sequenced a portion of the gene encoding for the chloroplast large sub-unit rRNA (LSU rDNA) as a new molecular marker. Sequencing of the chloroplast LSU rDNAs revealed the existence of an unusual diversity of group I introns (a total of 31) within 15 analyzed Trebouxi…

TrebouxiaNuclear geneBiologyDNA RibosomalGenomeEvolution MolecularSpecies SpecificityChlorophytaPhylogeneticsDNA Ribosomal SpacerGeneticsGroup I catalytic intronGenome ChloroplastMolecular BiologyPhylogenyEcology Evolution Behavior and SystematicsCell NucleusGeneticsLikelihood FunctionsPhylogenetic treeDNA Chloroplastfood and beveragesBayes TheoremSequence Analysis DNARibosomal RNAbiology.organism_classificationIntronsChloroplastMolecular Phylogenetics and Evolution
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Effects of pH and the presence of micelles on the resolution of diuretics by reversed-phase liquid chromatography

2004

A comparative study on the performance of two RPLC modes on the separation of 18 diuretics with diverse acid-base behaviour (acetazolamide, althiazide, amiloride, bendroflumethiazide, benzthiazide, bumetanide, canrenoic acid, chlorothiazide, chlorthalidone, ethacrynic acid, furosemide, hydrochlorothiazide, piretanide, probenecid, spironolactone, triamterene, trichloromethiazide and xipamide) was carried out. A conventional octadecylsilane column and acidic acetonitrile-water mobile phases, in the absence and presence of micelles of the anionic surfactant sodium dodecyl sulphate (SDS), were used. The effects of pH and the modifiers acetonitrile and SDS on peak asymmetry, efficiency, selectiv…

TriamtereneChromatographyChemistrymedicine.medical_treatmentOrganic ChemistryPiretanideGeneral MedicineReversed-phase chromatographyHydrogen-Ion ConcentrationSensitivity and SpecificityBiochemistryMicelleAnalytical Chemistrychemistry.chemical_compoundmedicineBendroflumethiazideXipamideDiureticBenzthiazideDiureticsMicellesChromatography Liquidmedicine.drugJournal of Chromatography A
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Epizootiology of protozoans in farmed salmonids at northern latitudes

1997

Abstract Protozoan ectoparasites were examined in a northern salmonid fish farm over a 10-year period, June 1984–May 1994, by the same researcher, with similar catching and sampling procedures throughout. Husbandry procedures remained constant during the study, e.g., fingerlings were kept in steel tanks and yearlings in both steel tanks and earth ponds. Ichthyobodo necator, Chilodonella hexasticha and Ichthyophthirius multifilurs infections were treated with formalin, salt and malachite green-formalin baths, respectively, whenever any parasites were found. Altogether 10 790 randomly sampled salmon (Salmo solar), sea trout (S. trutta m. trutta) and brown trout (S. trutta m. lacustris) were s…

TrichodinaTroutClimateFish farmingZoologyFresh WaterEctoparasitic InfestationsFish DiseasesBrown troutSpecies SpecificityAquacultureSalmonPrevalenceAnimalsSeawaterSalmoProtozoan Infections AnimalFinlandSalmonidaeProtozoan InfectionsbiologyIchthyophthirius multifiliisbusiness.industryAge FactorsTemperatureEukaryotaCold Climatebiology.organism_classificationFisheryTroutInfectious DiseasesAnimals DomesticParasitologySeasonsbusinessSalmonidaeInternational Journal for Parasitology
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Enantioselective Zirconium-Catalyzed Friedel−Crafts Alkylation of Pyrrole with Trifluoromethyl Ketones

2009

The first catalytic enantioselective Friedel-Crafts alkylation of pyrrole with 2,2,2-trifluoroacetophenones to give pyrroles with a trifluoromethyl-substituted tertiary alcohol moiety bearing a quaternary stereogenic center is described. The reaction is achieved in the presence of a 3,3'-dibromo-BINOL-Zr(IV) complex to give the expected products with high yields (up to 98%) and good enantioselectivities (up to 93% ee). The absolute stereochemistry of the products has been determined by chemical correlation.

TrifluoromethylAlkylationOrganic ChemistryEnantioselective synthesisStereoisomerismKetonesAlkylationBiochemistryMedicinal chemistryCatalysisSubstrate SpecificityCatalysisStereocenterchemistry.chemical_compoundchemistryMoietyPyrrolesZirconiumPhysical and Theoretical ChemistryFriedel–Crafts reactionPyrroleOrganic Letters
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Rapid determination of sterols in vegetable oils by CEC using methacrylate ester-based monolithic columns

2008

A method for the determination of sterols in vegetable oils by CEC with UV-Vis detection, using methacrylate ester-based monolithic columns, has been developed. To prepare the columns, polymerization mixtures containing monomers of different hydrophobicities were tried. The influence of composition of polymerization mixture was optimized in terms of porogenic solvent, monomers/porogens and monomer/crosslinker ratios. The composition of the mobile phase was also studied. The optimum monolith was obtained with lauryl methacrylate monomer at 60:40% (wt:wt) lauryl methacrylate/ethylene dimethacrylate ratio and 60 wt% porogens with 20 wt% of 1,4-butanediol (12 wt% 1,4-butanediol in the polymeriz…

TrisDetection limitgeographygeography.geographical_feature_categoryChromatographyResolution (mass spectrometry)ChemistryClinical BiochemistryPhytosterolsReproducibility of ResultsMethacrylateSensitivity and SpecificityBiochemistryAnalytical ChemistrySolventchemistry.chemical_compoundMonomerPolymethacrylic AcidsPolymerizationCapillary ElectrochromatographyMethacrylatesPlant OilsMonolithHydrophobic and Hydrophilic InteractionsFood AnalysisELECTROPHORESIS
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Switch between tyrosinase and catecholoxidase activity of scorpion hemocyanin by allosteric effectors

2008

AbstractPhenoloxidases and hemocyanins have similar type 3 copper centers although they perform different functions. Hemocyanins are oxygen carriers, while phenoloxidases (tyrosinase/catecholoxidase) catalyze the initial step in melanin synthesis. Tyrosinases catalyze two subsequent reactions, whereas catecholoxidases catalyze only the second one. Recent results indicate that hemocyanins can also function as phenoloxidases and here we show for the first time that hemocyanin can be converted to phenoloxidase. Furthermore, its substrate specificity can be switched between catecholoxidase and tyrosinase activity depending on effectors such as hydroxymethyl-aminomethan (Tris) and Mg2+-ions. Thi…

TrisStereochemistrymedicine.medical_treatmentTyrosinaseDopamineAllosteric regulationActivated hemocyaninBiophysicsMagnesium ChlorideTyramineType 3 copper proteinchemical and pharmacologic phenomenaBiochemistryCatalysisSubstrate SpecificityScorpionschemistry.chemical_compoundEnzyme activatorAllosteric RegulationStructural BiologyHemolymphHemolymphGeneticsmedicineAnimalsCatechol oxidaseMolecular BiologyScorpion Pandinus imperatorbiologyMonophenol MonooxygenaseSpectrum AnalysisActive siteCatecholoxidaseHemocyaninCell BiologyEnzyme ActivationchemistryBiochemistryHemocyaninsbiology.proteinTyrosinaseCatechol OxidaseFEBS Letters
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Life-history trade-offs in a generalist digenean from cetaceans: the role of host specificity and environmental factors

2015

Background Adults and larvae of generalist parasites are exposed to diverse hosts and local environmental conditions throughout their life cycles, thus local adaptation is expected to occur through phenotypic plasticity and/or natural selection. We investigated how the combined effect of cryptic host specificity and local selective pressures could shape reproductive traits of a putative generalist parasite in the oceanic realm. Methods The LSU rDNA, ITS2 and the mt-COI of individuals of the digenean Pholeter gastrophilus (Kossack, 1910) Odhner, 1914 (Heterophyidae Leiper, 1909) from oceanic striped dolphins, Stenella coeruleoalba Meyen, and coastal bottlenose dolphins, Tursiops truncatus Mo…

TroglotrematidaeZygoteMolecular Sequence DataZoologyTrade-offStenella coeruleoalbaBiologyGeneralist and specialist speciesDNA RibosomalHost SpecificityElectron Transport Complex IVStenellabiology.animalDNA Ribosomal Spacerparasitic diseasesMediterranean SeaAnimalsLocal adaptationPhenotypic plasticityHost (biology)EcologyResearchEgg sizefungiIntermediate hostEnvironmental exposureEnvironmental ExposureSequence Analysis DNADNA HelminthStenellaAdaptation PhysiologicalBottle-Nosed DolphinInfectious DiseasesFecundityRNA Ribosomalembryonic structuresParasitologyhuman activitiesDigeneaParasites & Vectors
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Species differences, influence of dose and application on biotransformation of phenol in fish.

1983

1. The metabolism of phenol in goldfish (Carassius auratus), rainbow trout (Salmo gairdneri) and goldenorfe ide (Leuciscus ideus melanotus) was compared. All three species produced phenyl sulphate, quinol sulphate and phenyl glucuronide. 2. The dose dependence of metabolism of phenol in goldfish was investigated. When the concn. of phenol was increased from 0.2 to 2 mg/l medium, that glucuronylated increased from 7 to 16% and that sulphated decreased from 63 to 47%. 3. The influence of mode of exposure on metabolism of phenol in goldfish was examined. Dietary exposure and uptake from medium was compared with i.p. injection. There was less metabolism in the order: dietary exposure greater th…

TroutHealth Toxicology and MutagenesisToxicologyBiochemistrychemistry.chemical_compoundLeuciscusBiotransformationPhenolsSpecies SpecificityGoldfishPhenolAnimalsFood sciencePhenolsBiotransformationPharmacologybiologyDose-Response Relationship DrugFishesWaterGeneral MedicineMetabolismbiology.organism_classificationTroutchemistryBiochemistryFoodRainbow troutGlucuronideInjections IntraperitonealXenobiotica; the fate of foreign compounds in biological systems
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Structure-based engineering of strictosidine synthase: auxiliary for alkaloid libraries.

2007

SummaryThe highly substrate-specific strictosidine synthase (EC 4.3.3.2) catalyzes the biological Pictet-Spengler condensation between tryptamine and secologanin, leading to the synthesis of about 2000 monoterpenoid indole alkaloids in higher plants. The crystal structure of Rauvolfia serpentina strictosidine synthase (STR1) in complex with strictosidine has been elucidated here, allowing the rational site-directed mutation of the active center of STR1 and resulting in modulation of its substrate acceptance. Here, we report on the rational redesign of STR1 by generation of a Val208Ala mutant, further describing the influence on substrate acceptance and the enzyme-catalyzed synthesis of 10-m…

TryptamineCHEMBIOLStrictosidine synthaseMICROBIOStereochemistryProtein ConformationClinical BiochemistryMutantDrug Evaluation PreclinicalMutation MissenseCrystallography X-RayProtein EngineeringBiochemistryIndole AlkaloidsSubstrate Specificitychemistry.chemical_compoundRauvolfia serpentinaDrug DiscoveryCatharanthusCarbon-Nitrogen LyasesMolecular BiologyVinca AlkaloidsPlant ProteinsPharmacologybiologyMolecular StructureGeneral Medicinebiology.organism_classificationLyaseBiochemistrychemistryStrictosidinebiology.proteinMutagenesis Site-DirectedMolecular MedicineSecologaninProtein BindingChemistrybiology
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3D-Structure and function of strictosidine synthase--the key enzyme of monoterpenoid indole alkaloid biosynthesis.

2008

Strictosidine synthase (STR; EC 4.3.3.2) plays a key role in the biosynthesis of monoterpenoid indole alkaloids by catalyzing the Pictet-Spengler reaction between tryptamine and secologanin, leading exclusively to 3alpha-(S)-strictosidine. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom. Moreover, the architecture of the enzyme-substrate and enzyme-product complexes reveals deep insight into the active centre and mechanism of the synthase highlighting the importance of Glu309 as the catalytic residue. The present review describes the 3D-structure and …

TryptamineStrictosidine synthaseATP synthasebiologyMolecular StructurePhysiologyStereochemistryProtein ConformationPlant Sciencebiology.organism_classificationSecologanin Tryptamine AlkaloidsSubstrate Specificitychemistry.chemical_compoundProtein structurechemistryBiosynthesisBiochemistryRauvolfia serpentinaStrictosidineCarbon-Nitrogen LyasesGeneticsbiology.proteinSecologaninVinca AlkaloidsPlant physiology and biochemistry : PPB
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