Search results for " Statistical"

showing 10 items of 1649 documents

Spatial moving average risk smoothing

2013

This paper introduces spatial moving average risk smoothing (SMARS) as a new way of carrying out disease mapping. This proposal applies the moving average ideas of time series theory to the spatial domain, making use of a spatial moving average process of unknown order to define dependence on the risk of a disease occurring. Correlation of the risks for different locations will be a function of m values (m being unknown), providing a rich class of correlation functions that may be reproduced by SMARS. Moreover, the distance (in terms of neighborhoods) that should be covered for two units to be found to make the correlation of their risks 0 is a quantity to be fitted by the model. This way, …

Statistics and ProbabilityStructure (mathematical logic)RiskModels StatisticalSeries (mathematics)EpidemiologyBayes TheoremFunction (mathematics)BiostatisticsMoving-average modelCorrelationMoving averageSpainEconometricsRange (statistics)HumansComputer SimulationDiseaseMortalitySmoothingMathematics
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Test and power considerations for multiple endpoint analyses using sequentially rejective graphical procedures

2009

A variety of powerful test procedures are available for the analysis of clinical trials addressing multiple objectives, such as comparing several treatments with a control, assessing the benefit of a new drug for more than one endpoint, etc. However, some of these procedures have reached a level of complexity that makes it difficult to communicate the underlying test strategies to clinical teams. Graphical approaches have been proposed instead that facilitate the derivation and communication of Bonferroni-based closed test procedures. In this paper we give a coherent description of the methodology and illustrate it with a real clinical trial example. We further discuss suitable power measur…

Statistics and ProbabilityTest strategyEndpoint DeterminationEpidemiologyComputer scienceControl (management)Analysis of clinical trialsMachine learningcomputer.software_genresymbols.namesakeDrug TherapyComputer GraphicsConfidence IntervalsHumansMulticenter Studies as TopicRandomized Controlled Trials as Topicbusiness.industryVariety (cybernetics)Test (assessment)Clinical trialBonferroni correctionClinical Trials Phase III as TopicData Interpretation StatisticalMultiple comparisons problemsymbolsArtificial intelligencebusinessAlgorithmcomputerStatistics in Medicine
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Basic networks: Definition and applications

2009

7 pages, 4 figures, 1 table.-- PMID: 19490867 [PubMed]

Statistics and ProbabilityTheoretical computer scienceInteractomeGeodesicinteractomeSteiner tree problemModels BiologicalGeneral Biochemistry Genetics and Molecular BiologyGraph03 medical and health sciencessymbols.namesakeModuleProtein Interaction MappingmoduleAnimalsSteiner tree030304 developmental biologyMathematicsDiscrete mathematics0303 health sciencesModels StatisticalGeneral Immunology and MicrobiologyApplied Mathematics030302 biochemistry & molecular biologyGeneral MedicinegraphGraphModeling and SimulationsymbolsNeural Networks ComputerGeneral Agricultural and Biological SciencesAlgorithms
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Sample size in cluster-randomized trials with time to event as the primary endpoint

2011

In cluster-randomized trials, groups of individuals (clusters) are randomized to the treatments or interventions to be compared. In many of those trials, the primary objective is to compare the time for an event to occur between randomized groups, and the shared frailty model well fits clustered time-to-event data. Members of the same cluster tend to be more similar than members of different clusters, causing correlations. As correlations affect the power of a trial to detect intervention effects, the clustered design has to be considered in planning the sample size. In this publication, we derive a sample size formula for clustered time-to-event data with constant marginal baseline hazards…

Statistics and ProbabilityTime FactorsEndpoint DeterminationSubstance-Related DisordersEpidemiologyPsychological interventionBiostatisticsTime-to-Treatmentlaw.inventionCorrelationRandom AllocationRandomized controlled triallawStatisticsClinical endpointEconometricsCluster AnalysisHumansPoisson DistributionBaseline (configuration management)Randomized Controlled Trials as TopicMathematicsEvent (probability theory)Likelihood FunctionsModels StatisticalTerm (time)Sample size determinationSample SizeRegression AnalysisSubstance Abuse Treatment CentersStatistics in Medicine
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Structure Learning in Nested Effects Models

2007

Nested Effects Models (NEMs) are a class of graphical models introduced to analyze the results of gene perturbation screens. NEMs explore noisy subset relations between the high-dimensional outputs of phenotyping studies, e.g., the effects showing in gene expression profiles or as morphological features of the perturbed cell. In this paper we expand the statistical basis of NEMs in four directions. First, we derive a new formula for the likelihood function of a NEM, which generalizes previous results for binary data. Second, we prove model identifiability under mild assumptions. Third, we show that the new formulation of the likelihood allows efficiency in traversing model space. Fourth, we…

Statistics and ProbabilityTraverseComputer scienceMolecular Networks (q-bio.MN)Genes MHC Class IIPerturbation (astronomy)Genes InsectFeature selectionQuantitative Biology - Quantitative Methods03 medical and health sciences0302 clinical medicineGeneticsAnimalsheterocyclic compoundsQuantitative Biology - Molecular NetworksGraphical modelMolecular BiologyQuantitative Methods (q-bio.QM)Oligonucleotide Array Sequence Analysis030304 developmental biologyLikelihood Functions0303 health sciencesNanoelectromechanical systemsModels StatisticalModels GeneticGene Expression ProfilingGenomicsComputational MathematicsDrosophila melanogasterPhenotypeFOS: Biological sciencesBinary dataIdentifiabilityRNA InterferenceLikelihood functionAlgorithmAlgorithms030217 neurology & neurosurgery
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Meta-work and the analogous Jarzynski relation in ensembles of dynamical trajectories

2014

Recently there has been growing interest in extending the thermodynamic method from static configurations to dynamical trajectories. In this approach, ensembles of trajectories are treated in an analogous manner to ensembles of configurations in equilibrium statistical mechanics: generating functions of dynamical observables are interpreted as partition sums, and the statistical properties of trajectory ensembles are encoded in free-energy functions that can be obtained through large-deviation methods in a suitable large time limit. This establishes what one can call a 'thermodynamics of trajectories'. In this paper we go a step further, and make a first connection to fluctuation theorems b…

Statistics and ProbabilityWork (thermodynamics)Statistical Mechanics (cond-mat.stat-mech)FOS: Physical sciencesStatistical and Nonlinear PhysicsContext (language use)ObservableStatistical mechanicsSpace (mathematics)Connection (mathematics)TrajectoryStatistical physicsStatistics Probability and UncertaintyQuantumCondensed Matter - Statistical MechanicsMathematics
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Large-distance asymptotic behaviour of multi-point correlation functions in massless quantum models

2014

We provide a microscopic model setting that allows us to readily access to the large-distance asymptotic behaviour of multi-point correlation functions in massless, one-dimensional, quantum models. The method of analysis we propose is based on the form factor expansion of the correlation functions and does not build on any field theory reasonings. It constitutes an extension of the restricted sum techniques leading to the large-distance asymptotic behaviour of two-point correlation functions obtained previously.

Statistics and Probability[PHYS.MPHY]Physics [physics]/Mathematical Physics [math-ph]FOS: Physical sciences01 natural sciencesCorrelation0103 physical sciencesField theory (psychology)[NLIN.NLIN-SI]Nonlinear Sciences [physics]/Exactly Solvable and Integrable Systems [nlin.SI]Statistical physics010306 general physicsQuantumMathematical PhysicsCondensed Matter - Statistical MechanicsMulti pointPhysicsNonlinear Sciences - Exactly Solvable and Integrable SystemsStatistical Mechanics (cond-mat.stat-mech)010308 nuclear & particles physics[PHYS.HTHE]Physics [physics]/High Energy Physics - Theory [hep-th]Form factor (quantum field theory)Statistical and Nonlinear PhysicsMathematical Physics (math-ph)Method of analysisExtension (predicate logic)Massless particleExactly Solvable and Integrable Systems (nlin.SI)Statistics Probability and Uncertainty
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Brownian motion in trapping enclosures: Steep potential wells, bistable wells and false bistability of induced Feynman-Kac (well) potentials

2019

We investigate signatures of convergence for a sequence of diffusion processes on a line, in conservative force fields stemming from superharmonic potentials $U(x)\sim x^m$, $m=2n \geq 2$. This is paralleled by a transformation of each $m$-th diffusion generator $L = D\Delta + b(x)\nabla $, and likewise the related Fokker-Planck operator $L^*= D\Delta - \nabla [b(x)\, \cdot]$, into the affiliated Schr\"{o}dinger one $\hat{H}= - D\Delta + {\cal{V}}(x)$. Upon a proper adjustment of operator domains, the dynamics is set by semigroups $\exp(tL)$, $\exp(tL_*)$ and $\exp(-t\hat{H})$, with $t \geq 0$. The Feynman-Kac integral kernel of $\exp(-t\hat{H})$ is the major building block of the relaxatio…

Statistics and Probabilitybistable wellsBlock (permutation group theory)General Physics and AstronomyFOS: Physical sciencessteep wellsMathematics - Spectral Theorysymbols.namesakeFeynman–Kac potentialsFOS: MathematicsFeynman diagramNabla symbolSpectral Theory (math.SP)Condensed Matter - Statistical MechanicsMathematical PhysicsBrownian motionEigenvalues and eigenvectorsMathematical physicsPhysicsQuantum PhysicsSubharmonic functionStatistical Mechanics (cond-mat.stat-mech)Generator (category theory)Probability (math.PR)Statistical and Nonlinear PhysicsMathematical Physics (math-ph)trapping enclosuresboundary dataModeling and SimulationsymbolsBrownian motionQuantum Physics (quant-ph)Laplace operatorMathematics - Probability
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Efficient change point detection in genomic sequences of continuous measurements

2010

Abstract Motivation: Knowing the exact locations of multiple change points in genomic sequences serves several biological needs, for instance when data represent aCGH profiles and it is of interest to identify possibly damaged genes involved in cancer and other diseases. Only a few of the currently available methods deal explicitly with estimation of the number and location of change points, and moreover these methods may be somewhat vulnerable to deviations of model assumptions usually employed. Results: We present a computationally efficient method to obtain estimates of the number and location of the change points. The method is based on a simple transformation of data and it provides re…

Statistics and Probabilitymodel selectionBreast Neoplasmscomputer.software_genreBiochemistryCell LineSimple (abstract algebra)Cell Line TumorHumansComputer Simulationpiecewise constant modelMolecular BiologyMathematicsOligonucleotide Array Sequence AnalysisSupplementary dataComparative Genomic HybridizationModels StatisticalSeries (mathematics)Model selectionGenomicsComputer Science ApplicationsComputational MathematicsR packageTransformation (function)Computational Theory and MathematicsChange pointsChangepointaCGH analysiFemaleData miningSettore SECS-S/01 - StatisticacomputerChange detection
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Lévy processes in bounded domains: path-wise reflection scenarios and signatures of confinement

2022

We discuss an impact of various (path-wise) reflection-from-the barrier scenarios upon confining properties of a paradigmatic family of symmetric $\alpha $-stable L\'{e}vy processes, whose permanent residence in a finite interval on a line is secured by a two-sided reflection. Depending on the specific reflection "mechanism", the inferred jump-type processes differ in their spectral and statistical characteristics, like e.g. relaxation properties, and functional shapes of invariant (equilibrium, or asymptotic near-equilibrium) probability density functions in the interval. The analysis is carried out in conjunction with attempts to give meaning to the notion of a reflecting L\'{e}vy process…

Statistics and Probabilityreflection scenariosasymptotic pdfs in the intervalpath-wise analysisreflecting boundary dataStatistical Mechanics (cond-mat.stat-mech)Probability (math.PR)General Physics and AstronomyFOS: Physical sciencesStatistical and Nonlinear PhysicsMathematical Physics (math-ph)reflecting L´evy processMathematics - Analysis of PDEsModeling and SimulationFOS: Mathematicsfractional LaplacianCondensed Matter - Statistical MechanicsMathematics - ProbabilityMathematical Physicsrandom walk approximationAnalysis of PDEs (math.AP)Journal of Physics A-Mathematical and Theoretical
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