Search results for " Statistical"

showing 10 items of 1649 documents

Can number and size of offspring increase simultaneously?--a central life-history trade-off reconsidered.

2011

Abstract Background To maximize their fitness, parents are assumed to allocate their resources optimally between number and size of offspring. Although this fundamental life-history trade-off has been subject to long standing interest, its genetic basis, especially in wild mammals, still remains unresolved. One important reason for this problem is that a large multigenerational pedigree is required to conduct a reliable analysis of this trade-off. Results We used the REML-animal model to estimate genetic parameters for litter size and individual birth size for a common Palearctic small mammal, the bank vole (Myodes glareolus). Even though a phenotypic trade-off between offspring number and …

0106 biological sciencesLitter (animal)MaleGenetic correlationLitter SizeEvolutionOffspringZoologyTrade-off010603 evolutionary biology01 natural sciencesGenetic correlationHeritability03 medical and health sciencesQuantitative Trait Heritable<it>Myodes glareolus</it>Genetic variationMyodes glareolusQH359-425AnimalsBody SizeSelection GeneticEcology Evolution Behavior and SystematicsSelection (genetic algorithm)030304 developmental biology0303 health sciencesModels StatisticalbiologyArvicolinaeGenetic VariationHeritabilitybiology.organism_classificationBiological EvolutionBirth sizeBank volePhenotypeEvolutionary biologyFemaleResearch ArticleBMC evolutionary biology
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Advantage of rare infanticide strategies in an invasion experiment of behavioural polymorphism

2012

Killing conspecific infants (infanticide) is among the most puzzling phenomena in nature. Stable polymorphism in such behaviour could be maintained by negative frequency-dependent selection (benefit of rare types). However, it is currently unknown whether there is genetic polymorphism in infanticidal behaviour or whether infanticide may have any fitness advantages when rare. Here we show genetic polymorphism in non-parental infanticide. Our novel invasion experiment confirms negative frequency-dependent selection in wild bank vole populations, where resource benefits allow an infanticidal strategy to invade a population of non-infanticidal individuals. The results show that infanticidal beh…

0106 biological sciencesMalePopulationGeneral Physics and AstronomyBiology010603 evolutionary biology01 natural sciencesGenetic correlationGeneral Biochemistry Genetics and Molecular BiologyArticleSex FactorsPolymorphism (computer science)AnimalseducationMaternal BehaviorSelection (genetic algorithm)Paternal BehaviorComputingMilieux_MISCELLANEOUSGeneticseducation.field_of_studyMultidisciplinaryModels StatisticalPolymorphism GeneticBehavior AnimalArvicolinaeGeneral Chemistrybiology.organism_classification010601 ecologyBank voleAggressionAnimals NewbornEvolutionary biologyMutationLinear ModelsFemale[SDE.BE]Environmental Sciences/Biodiversity and Ecology
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Efficient estimation of generalized linear latent variable models.

2019

Generalized linear latent variable models (GLLVM) are popular tools for modeling multivariate, correlated responses. Such data are often encountered, for instance, in ecological studies, where presence-absences, counts, or biomass of interacting species are collected from a set of sites. Until very recently, the main challenge in fitting GLLVMs has been the lack of computationally efficient estimation methods. For likelihood based estimation, several closed form approximations for the marginal likelihood of GLLVMs have been proposed, but their efficient implementations have been lacking in the literature. To fill this gap, we show in this paper how to obtain computationally convenient estim…

0106 biological sciencesMultivariate statisticsMultivariate analysisComputer scienceBinomials01 natural sciencesPolynomials010104 statistics & probabilityAmoebastilastolliset mallitestimointiProtozoansLikelihood FunctionsMultidisciplinaryApproximation MethodsStatistical ModelsSimulation and ModelingApplied MathematicsStatisticsQLinear modelREukaryotaLaplace's methodData Interpretation StatisticalPhysical SciencesVertebratesMedicineAlgorithmAlgorithmsResearch ArticleOptimizationScienceLatent variableResearch and Analysis Methods010603 evolutionary biologygeneralized linear latent variable modelsSet (abstract data type)BirdsAnimalsComputer Simulation0101 mathematicsta112OrganismsBiology and Life SciencesStatistical modelMarginal likelihoodAlgebraAmniotesMultivariate AnalysisLinear ModelsMathematicsSoftwarePLoS ONE
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Risk of predation makes foragers less choosy about their food.

2017

18 pages; International audience; Animals foraging in the wild have to balance speed of decision making and accuracy of assessment of a food item's quality. If resource quality is important for maximizing fitness, then the duration of decision making may be in conflict with other crucial and time consuming tasks, such as anti-predator behaviours or competition monitoring. Individuals facing the risk of predation and/or competition should adjust the duration of decision making and, as a consequence, their level of choosiness for resources. When exposed to predation, the forager could either maintain its level of choosiness for food items but accept a reduction in the amount of food items con…

0106 biological sciencesPhysiologylcsh:MedicinePredationSocial SciencesKaplan-Meier EstimateChoice Behavior01 natural sciencesPredationCognitionMathematical and Statistical TechniquesBeetlesMedicine and Health Sciences[ SDV.EE.IEO ] Life Sciences [q-bio]/Ecology environment/SymbiosisPsychologyForagingDecision-makinglcsh:Sciencemedia_common2. Zero hungerMultidisciplinaryEcologyAnimal BehaviorEcology05 social sciencesEukaryotaPlantsTrophic InteractionsInsectsCommunity EcologyPhysical SciencesSeedsStatistics (Mathematics)Research ArticleRiskOpportunity costArthropodaMovementmedia_common.quotation_subjectDecision MakingForagingBiologyResearch and Analysis Methods010603 evolutionary biologyIntraspecific competitionCompetition (biology)Food PreferencesAnimals0501 psychology and cognitive sciencesQuality (business)050102 behavioral science & comparative psychologyStatistical MethodsBehavior[ SDE.BE ] Environmental Sciences/Biodiversity and Ecologylcsh:REcology and Environmental SciencesCognitive PsychologyFood ConsumptionOrganismsBiology and Life SciencesInterspecific competitionInvertebratesFoodPredatory BehaviorCognitive Sciencelcsh:QWeeds[SDE.BE]Environmental Sciences/Biodiversity and EcologyPhysiological ProcessesZoologyMathematicsNeuroscienceGeneralized Linear ModelDemography[SDV.EE.IEO]Life Sciences [q-bio]/Ecology environment/Symbiosis
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Detection of Allee effects in marine fishes: analytical biases generated by data availability and model selection

2017

The demographic Allee effect, or depensation, implies positive association between per capita population growth rate and population size at low abundances, thereby lowering growth ability of sparse populations. This can have far-reaching consequences on population recovery ability and colonization success. In the context of marine fishes, there is a widespread perception that Allee effects are rare or non-existent. However, studies that have failed to detect Allee effects in marine fishes have suffered from several fundamental methodological and data limitations. In the present study, we challenge the prevailing perception about the rarity of Allee effects by analysing nine populations of …

0106 biological sciencesPopulation DynamicsAtlantic herringBiologyModels Biological010603 evolutionary biology01 natural sciencesPopulation densityGeneral Biochemistry Genetics and Molecular BiologycompensationDepensationsymbols.namesakePer capitaAnimalsPopulation growth14. Life underwaterClupea harengusPopulation GrowthGeneral Environmental ScienceAllee effectlow-abundance dynamicsPopulation DensityModels StatisticalEcologyGeneral Immunology and MicrobiologyEcology010604 marine biology & hydrobiologyModel selectionPopulation sizestock–recruitment relationshipFishesBayes TheoremGeneral MedicineData availabilitydepensationsymbolsta1181General Agricultural and Biological SciencesProceedings of the Royal Society B: Biological Sciences
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The role of noise on the steady state distributions of phytoplankton populations

2016

The spatio-temporal behaviour of total chlorophyll concentration is investigated in the middle of the Tyrrhenian Sea by using a stochastic approach. The study is based on a reaction-diffusion-taxis model, which is used to analyse the dynamics of five phytoplankton groups, responsible for about 80% of the total chlorophyll a inside the euphotic zone of the water column. The analysis is performed by considering: (i) the intraspecific competition of the phytoplanktonic groups for limiting factors, i.e. light intensity and nutrient concentration, (ii) the seasonal changes of environmental variables, and (iii) the random fluctuations of the components of the velocity field and temperature. Speci…

0106 biological sciencesStatistics and ProbabilityPhysicsSteady state (electronics)010504 meteorology & atmospheric sciences010604 marine biology & hydrobiologyturbulenceHydrodynamic fluctuationstochastic processes (theory)Statistical and Nonlinear Physics01 natural sciencesSettore FIS/07 - Fisica Applicata(Beni Culturali Ambientali Biol.e Medicin)NoisePhytoplanktonHydrodynamic fluctuations; stochastic particle dynamics (theory); stochastic processes (theory); turbulence; Statistical and Nonlinear Physics; Statistics and Probability; Statistics Probability and Uncertaintystochastic particle dynamics (theory)Statistical physicsStatistics Probability and UncertaintyStatistical and Nonlinear Physic0105 earth and related environmental sciencesJournal of Statistical Mechanics: Theory and Experiment
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The irreducible uncertainty of the demography–environment interaction in ecology

2002

The interpretation of ecological data has been greatly improved by bridging the gap between ecological and statistical models. The major challenge is to separate competing hypotheses concerning demography, or other ecological relationships, and environmental variability (noise). In this paper we demonstrate that this may be an arduous, if not impossible, task. It is the lack of adequate ecological theory, rather than statistical sophistication, which leads to this problem. A reconstruction of underlying ecological processes can only be done if we are certain of either the demographic or the noise model, which is something that can only be achieved by an improved theory of stochastic ecologi…

0106 biological sciencesTime Factorsmedia_common.quotation_subjectPopulation DynamicsBiologyEcological systems theoryModels Biological010603 evolutionary biology01 natural sciencesGeneral Biochemistry Genetics and Molecular BiologyEcological relationshipEconometricsAnimalsNatural ecosystemEnvironmental noiseSophisticationEcosystemGeneral Environmental Sciencemedia_commonStochastic ProcessesModels StatisticalGeneral Immunology and MicrobiologyEcologyStochastic process010604 marine biology & hydrobiologySystem identificationStatistical modelGeneral MedicineBiological Sciences13. Climate actionGeneral Agricultural and Biological SciencesResearch ArticleDemographyProceedings of the Royal Society of London. Series B: Biological Sciences
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Effect of acyl-CoA oxidase activity on the accumulation of gamma-decalactone by the yeast Yarrowia lipolytica: a factorial approach.

2007

International audience; beta-Oxidation is a cyclic pathway involved in the degradation of lipids. In yeast, it occurs in peroxisomes and the first step is catalyzed by an acyl-CoA oxidase (Aoxp). The yeast Yarrowia lipolytica possesses several genes (POX) coding for Aoxps. This study is based on the factorial analysis of results obtained with the many POX derivative strains that have been constructed previously. The effect of interactions between Aoxps on the acyl-CoA oxidase (Aox) activity was important even at the second order. We then investigated the effect of Aox activity on growth and lactone production. Aox activity was correlated with acidification of the medium by cells and with ce…

0106 biological sciencesYarrowia lipolyticaMESH: Enzyme ActivationMetabolic Clearance RateMESH: Factor Analysis StatisticalYarrowiaBiologymodèleModels Biological01 natural sciencesApplied Microbiology and BiotechnologyLactones03 medical and health sciencesEnzyme activatorSpecies SpecificityMESH: Computer Simulation010608 biotechnologyCombinatorial Chemistry TechniquesAcyl-CoA oxidaseMESH: Species SpecificityComputer Simulation030304 developmental biologychemistry.chemical_classificationMESH: Metabolic Clearance Rate0303 health sciencesOxidase testmétabolisme des acides grasAcyl-CoA oxidase activityMESH: Acyl-CoA OxidaseMESH: Models BiologicalYarrowia[SDV.BBM.BM]Life Sciences [q-bio]/Biochemistry Molecular Biology/Molecular biologyGeneral MedicinePeroxisomebiology.organism_classificationYeastEnzyme ActivationBiochemistrychemistrylactoneMolecular MedicineMESH: Combinatorial Chemistry TechniquesMESH: YarrowiaAcyl-CoA OxidaseFactor Analysis StatisticalLactoneMESH: Lactones
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Priorities for research in soil ecology

2017

The ecological interactions that occur in and with soil are of consequence in many ecosystems on the planet. These interactions provide numerous essential ecosystem services, and the sustainable management of soils has attracted increasing scientific and public attention. Although soil ecology emerged as an independent field of research many decades ago, and we have gained important insights into the functioning of soils, there still are fundamental aspects that need to be better understood to ensure that the ecosystem services that soils provide are not lost and that soils can be used in a sustainable way. In this perspectives paper, we highlight some of the major knowledge gaps that shoul…

0106 biological sciencesaboveground-belowground interactionsSoil biodiversityAboveground-belowground interactionssoil processesWiskundige en Statistische Methoden - Biometris01 natural sciencesEcosystem servicesekosysteemitSoil managementMicrobial ecologyNovel environmentsSoil food webClimate changeGlobal change2. Zero hungerSoil healthbiodiversity–ecosystem functioningEcologySoil Biology04 agricultural and veterinary sciencesSoil processesPE&RCclimate changeekosysteemipalvelutGeographyBiogeographyinternationalSoil managementBiodiversity–ecosystem functioningplant-microbe interactionsSoil Sciencesoil biodiversityChemical ecologyAboveground-belowground interactions; Biodiversity–ecosystem functioning; Biogeography; Chemical ecology; Climate change; Ecosystem services; Global change; Microbial ecology; Novel environments; Plant-microbe interactions; Soil biodiversity; Soil food web; Soil management; Soil processes010603 evolutionary biologyArticleeliömaantiedesoil food webSoil governanceSoil food webSoil ecologyEcosystem servicesMathematical and Statistical Methods - BiometrisEnvironmental planningBodembiologieglobal changeEcology Evolution Behavior and Systematicsmaaperänsuojeluchemical ecology15. Life on landSoil biodiversitybiodiversiteettiekosysteemit (ekologia)mikrobiekologia13. Climate actionSustainable management040103 agronomy & agricultureta1181ilmastonmuutosnovel environments0401 agriculture forestry and fisheriessoil managementPlant-microbe interactions
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A spatially explicit risk assessment approach: Cetaceans and marine traffic in the Pelagos Sanctuary (Mediterranean Sea).

2017

15 páginas, 5 figuras, 2 tablas.-- This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited

0106 biological scienceslcsh:MedicineMarine and Aquatic SciencesTransportationStenella coeruleoalba01 natural sciencesMediterranean seaStenellaOceanslcsh:ScienceConservation ScienceMammalsMultidisciplinarybiologyFin WhaleMarine reserveFin WhalesHabitatsBottle-Nosed DolphinGeographyHabitatVertebratesEngineering and TechnologyResearch ArticleConservation of Natural ResourcesDolphinsMarine BiologySede Central IEO010603 evolutionary biologyRisk AssessmentBodies of waterbiology.animalMediterranean SeaAnimals14. Life underwaterMarine MammalsEcosystemShipsModels StatisticalBalaenoptera010604 marine biology & hydrobiologylcsh:REcology and Environmental SciencesOrganismsWhalesBiology and Life SciencesAquatic EnvironmentsPelagic zoneMarine spatial planningBayes Theorembiology.organism_classificationMarine EnvironmentsBoatsFisheryAmniotesEarth Scienceslcsh:QMarine protected area
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