Search results for " Systematics."

showing 10 items of 4820 documents

Local adaptation of plant viruses: lessons from experimental evolution.

2016

[EN] For multihost pathogens, adaptation to multiple hosts has important implications for both applied and basic research. At the applied level, it is one of the main factors determining the probability and severity of emerging disease outbreaks. At the basic level, it is thought to be a key mechanism for the maintenance of genetic diversity both in host and pathogen species. In recent years, a number of evolution experiments have assessed the fate of plant virus populations replicating within and adapting to one single or to multiple hosts species. A first group of these experiments tackled the existence of trade-offs in fitness and virulence for viruses evolving either within a single hos…

0106 biological sciences0301 basic medicineGeneralistsGenotypeLocal adaptationAcclimatizationGenetic FitnessBiology010603 evolutionary biology01 natural sciencesHost SpecificityPlant VirusesEvolution Molecular03 medical and health sciencesPathosystemGeneticsGenetic PleiotropyEcology Evolution Behavior and SystematicsLocal adaptationGenetic diversityExperimental evolutionVirulenceGenetic VariationGenetic PleiotropyVirus evolutionSpecialists030104 developmental biologyExperimental evolutionEvolutionary biologyViral evolutionHost rangeAntagonistic pleiotropyGenetic FitnessAdaptationMolecular ecology
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Colorado potato beetle chymotrypsin genes are differentially regulated in larval midgut in response to the plant defense inducer hexanoic acid or the…

2019

When Colorado potato beetle larvae ingested potato plants treated with the plant defense inducer compound hexanoic acid, midgut chymotrypsin enzyme activity increased, and the corresponding chymotrypsin genes were differentially expressed, evidence of the larval digestive proteolytic system's plasticity. We previously reported increased susceptibility to Cry3Aa toxin in larvae fed hexanoic acid treated plants. Here we show that the most expressed chymotrypsin gene in larvae fed hexanoic acid treated plants, CTR6, was dramatically downregulated in Cry3Aa intoxicated larvae. lde-miR-965-5p and lde-miR-9a-5p microRNAs, predicted to target CTR6, might be involved in regulating the response to h…

0106 biological sciences0301 basic medicineGenes Insectmedicine.disease_cause01 natural sciencesMicrobiologyHemolysin Proteins03 medical and health scienceschemistry.chemical_compoundBacterial ProteinsBacillus thuringiensisPlant defense against herbivorymedicineAnimalsChymotrypsinCaproatesEcology Evolution Behavior and SystematicsSolanum tuberosumHexanoic acidChymotrypsinBacillus thuringiensis ToxinsbiologyToxinfungiColorado potato beetlefood and beveragesMidgutbiology.organism_classificationEnzyme assayColeopteraEndotoxins010602 entomology030104 developmental biologyGene Expression RegulationchemistryLarvabiology.proteinDigestive SystemJournal of Invertebrate Pathology
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The legacy of a vanished sea: a high level of diversification within a European freshwater amphipod species complex driven by 15 My of Paratethys reg…

2016

16 pages; International audience; The formation of continental Europe in the Neogene was due to the regression of the Tethys Ocean and of the Paratethys Sea. The dynamic geology of the area and repetitious transitions between marine and freshwater conditions presented opportunities for the colonization of newly emerging hydrological networks and diversification of aquatic biota. Implementing mitochondrial and nuclear markers in conjunction with a large-scale sampling strategy, we investigated the impact of this spatiotemporal framework on the evolutionary history of a freshwater crustacean morphospecies. The Gammarus balcanicus species complex is widely distributed in the area previously oc…

0106 biological sciences0301 basic medicineGenetic MarkersSpecies complexPleistoceneMolecular Sequence DataFresh WaterBiologyphylogeographyNeogene[SDV.BID.SPT]Life Sciences [q-bio]/Biodiversity/Systematics Phylogenetics and taxonomy010603 evolutionary biology01 natural sciencesDNA Mitochondrial03 medical and health sciencesPaleontologyancestral state reconstructionPolyphylyGeneticsAnimalsAmphipoda14. Life underwaterEndemismEcology Evolution Behavior and Systematicsmolecular phylogenyPhylogenyInvertebrate[ SDE.BE ] Environmental Sciences/Biodiversity and Ecologycryptic diversitySpatial AnalysisEcologycrustaceansorigin of freshwater faunaBayes TheoremSequence Analysis DNA15. Life on landTethys OceanBiological EvolutionEuropePhylogeography030104 developmental biology[SDE.BE]Environmental Sciences/Biodiversity and Ecology[ SDV.BID.SPT ] Life Sciences [q-bio]/Biodiversity/Systematics Phylogenetics and taxonomyMolecular ecology
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HERITABILITIES OF DOMINANCE-RELATED TRAITS IN MALE BANK VOLES (CLETHRIONOMYS GLAREOLUS)

1998

A number of studies have shown that in several animal species females prefer dominant males as mating partners, but fewer attempts have been made to measure possible indirect benefits of this choice. One reason for this may be that, even though dominance is a widely used concept, the definition of dominance still remains controversial. Furthermore, defining and measuring the heritability of social behaviors is problematic because they are not individual traits but, by definition, involve interactions between at least two individuals. In this study we estimated heritabilities and coefficients of additive genetic variances (CVA) for male traits that are closely associated with dominance and f…

0106 biological sciences0301 basic medicineGeneticsOffspringPreputial glandZoologyHeritabilityBiology010603 evolutionary biology01 natural sciencesGenetic correlationMating preferencesRegression03 medical and health sciences030104 developmental biologyGenetic variationGeneticsGeneral Agricultural and Biological SciencesEcology Evolution Behavior and SystematicsDominance (genetics)Evolution
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cDNA sequences of two arylphorin subunits of an insect biliprotein: phylogenetic differences and gene duplications during evolution of hexamerins-imp…

2016

Arylphorins represent a conserved class of hexameric ∼500 kDa insect hemolymph glycoproteins, rich in aromatic amino acids, which are produced in large quantities at the larval stage as reserves for metamorphosis and egg development. The recently isolated arylphorin from the moth Cerura vinula is unique in being complexed to a novel farnesylated bilin. Protein sequencing suggested the presence of two different ∼85 kDa subunits. Here, we report the complete coding sequences of two cDNAs encoding two arylphorins subunits with 67% identity and calculated physicochemical characteristics in agreement with the isolated holoprotein. Our phylogenetic analyses of the hexamerins revealed monophyletic…

0106 biological sciences0301 basic medicineGeneticsPhylogenetic treebiologyCerura vinulaProtein subunitAntheraea pernyibiology.organism_classification01 natural sciences010602 entomology03 medical and health sciences030104 developmental biologyProtein sequencingPhylogeneticsComplementary DNAGeneticsMolecular MedicineAnimal Science and ZoologyPeptide sequenceEcology Evolution Behavior and SystematicsDevelopmental BiologyJournal of Experimental Zoology Part B: Molecular and Developmental Evolution
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Chironomus riparius(Diptera) genome sequencing reveals the impact of minisatellite transposable elements on population divergence

2016

AbstractActive transposable elements (TEs) may result in divergent genomic insertion and abundance patterns among conspecific populations. Upon secondary contact, such divergent genetic backgrounds can theoretically give rise to classical Dobzhansky-Muller incompatibilities (DMI), a way how TEs can contribute to the evolution of endogenous genetic barriers and eventually population divergence. We investigated whether differential TE activity created endogenous selection pressures among conspecific populations of the non-biting midgeChironomus riparius,focussing on aChironomus-specific TE, the minisatellite-likeCla-element, whose activity is associated with speciation in the genus. Using an …

0106 biological sciences0301 basic medicineGenome Insectved/biology.organism_classification_rank.speciesPopulationGenomicsMinisatellite RepeatsBiologyPolymorphism Single Nucleotide010603 evolutionary biology01 natural sciencesGenomeChironomidaeDNA sequencingEvolution Molecular03 medical and health sciencesNegative selectionGeneticsAnimalseducationIn Situ Hybridization FluorescenceEcology Evolution Behavior and SystematicsLocal adaptationGeneticsChironomus ripariuseducation.field_of_studyPolytene chromosomeved/biologyfood and beveragesGenetics Population030104 developmental biologyMinisatelliteEvolutionary biologyDNA Transposable ElementsFemaleMolecular Ecology
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Host infection history modifies co-infection success of multiple parasite genotypes.

2015

Co-infections by multiple parasite genotypes are common and have important implications for host-parasite ecology and evolution through within-host interactions. Typically, these infections take place sequentially, and therefore, the outcome of co-infection may be shaped by host immune responses triggered by previous infections. For example, in vertebrates, specific immune responses play a central role in protection against disease over the course of life, but co-infection research has mostly focused on previously uninfected individuals. Here, we investigated whether sequential exposure and activation of host resistance in rainbow trout Oncorhynchus mykiss affects infection success and inte…

0106 biological sciences0301 basic medicineGenotypeDiseaseTrematode Infections010603 evolutionary biology01 natural sciencesHost-Parasite Interactions03 medical and health sciencesFish DiseasesImmune systembiology.animalParasite hostingAnimalsEcology Evolution Behavior and SystematicsGeneticsbiologyHost (biology)CoinfectionVertebrateAcquired immune system030104 developmental biologyOncorhynchus mykissImmunologyFacilitationAnimal Science and ZoologyEvolutionary ecologyTrematodaThe Journal of animal ecology
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Multi-modal defences in aphids offer redundant protection and increased costs likely impeding a protective mutualism.

2017

The pea aphid, Acyrthosiphon pisum, maintains extreme variation in resistance to its most common parasitoid wasp enemy, Aphidius ervi, which is sourced from two known mechanisms: protective bacterial symbionts, most commonly Hamiltonella defensa, or endogenously encoded defences. We have recently found that individual aphids may employ each defence individually, occasionally both defences together, or neither. In field populations, Hamiltonella-infected aphids are found at low to moderate frequencies and while less is known about the frequency of resistant genotypes, they show up less often than susceptible genotypes in field collections. To better understand these patterns, we sought to co…

0106 biological sciences0301 basic medicineGenotypeWaspsZoologyParasitismGenes InsectHamiltonella defensa010603 evolutionary biology01 natural sciencesParasitoid wasp03 medical and health sciencesEnterobacteriaceaeAnimalsEcology Evolution Behavior and SystematicsMutualism (biology)AphidbiologyHost Microbial InteractionsEcologyfood and beveragesbiology.organism_classificationFecundityAcyrthosiphon pisum030104 developmental biologyFertilityAnimal ecologyAphidsAnimal Science and ZoologyThe Journal of animal ecology
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From microbial eukaryotes to metazoan vertebrates: Wide spectrum paleo-diversity in sedimentary ancient DNA over the last ~14,500 years

2018

Most studies that utilize ancient DNA have focused on specific groups of organisms or even single species. Instead, the whole biodiversity of eukaryotes can be described using universal phylogenetic marker genes found within well-preserved sediment cores that cover the post-glacial period. Sedimentary ancient DNA samples from Lake Lielais Svētiņu, eastern Latvia, at a core depth of 1,050 cm in ~150 year intervals were used to determine phylotaxonomy in domain Eukaryota. Phylotaxonomic affiliation of >1,200 eukaryotic phylotypes revealed high richness in all major eukaryotic groups-Alveolata, Stramenopiles, Cercozoa, Chlorophyta, Charophyta, Nucletmycea, and Holozoa. The share of organisms t…

0106 biological sciences0301 basic medicineGeologic SedimentsBiodiversityChlorophyta010603 evolutionary biology01 natural sciences03 medical and health sciencesRNA Ribosomal 18SAnimals14. Life underwaterDNA AncientEcology Evolution Behavior and SystematicsGeneral Environmental ScienceTrophic levelbiologyEcologyLake ecosystemSequence Analysis DNA15. Life on landbiology.organism_classification030104 developmental biologyAncient DNAVertebratesPaleoecologyGeneral Earth and Planetary SciencesSpecies richnessCercozoaGeobiology
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Ongoing Evolution in the Genus Crocus: Diversity of Flowering Strategies on the Way to Hysteranthy

2021

[EN] Species of the genus Crocus are found over a wide range of climatic areas. In natural habitats, these geophytes diverge in the flowering strategies. This variability was assessed by analyzing the flowering traits of the Spanish collection of wild crocuses, preserved in the Bank of Plant Germplasm of Cuenca. Plants of the seven Spanish species were analyzed both in their natural environments (58 native populations) and in common garden experiments (112 accessions). Differences among species observed in the native habitats were maintained under uniform environmental conditions, suggesting a genetic basis for flowering mechanisms. Two eco-morphological types, autumn- and spring-flowering …

0106 biological sciences0301 basic medicineGermplasmFlowering timeRange (biology)SynanthousBiodiversityPlant Science15.- Proteger restaurar y promover la utilización sostenible de los ecosistemas terrestres gestionar de manera sostenible los bosques combatir la desertificación y detener y revertir la degradación de la tierra y frenar la pérdida de diversidad biológica01 natural sciencesArticle03 medical and health sciencesGenuslcsh:BotanyBotanyHysteranthousPrimordiumGenetic variabilityEcology Evolution Behavior and SystematicsCrocusEcologybiologyfungifood and beveragesBiodiversitybiology.organism_classificationBiodiversitatlcsh:QK1-989Settore AGR/07 - GENETICA AGRARIAFlower development030104 developmental biologyHabitatFloraFISIOLOGIA VEGETALGenetic variability010606 plant biology & botanyPlants
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