Search results for " Variation"

showing 10 items of 1712 documents

Diversification of CYCLOIDEA-like TCP genes in the basal eudicot families Fumariaceae and Papaveraceae s.str.

2006

CYCLOIDEA-like genes belong to the TCP family of transcriptional regulators and have been shown to control different aspects of shoot development in various angiosperm lineages, including flower monosymmetry in asterids and axillary meristem growth in monocots. Genes related to the CYC gene from ANTIRRHINUM show independent duplications in both asterids and rosids. However, it remains unclear to what extent this affected the evolution of flower symmetry and shoot branching in these and other eudicot lineages. Here, we show that CYC-like genes have also undergone duplications in two related Ranunculales families, Fumariaceae and Papaveraceae s.str. These families exhibit morphological divers…

AquilegiaAsteridsMolecular Sequence DataPlant ScienceFlowersBiologyGenes PlantEvolution MolecularPhylogeneticsPapaveraceaeGene duplicationPapaveraceaeAmino Acid SequenceEcology Evolution Behavior and SystematicsPhylogenyPlant ProteinsGeneticsPhylogenetic treefungiAntirrhinumfood and beveragesGenetic VariationGeneral Medicinebiology.organism_classificationDNA-Binding ProteinsRanunculalesOrgan SpecificityFumariaceaeTranscription FactorsPlant biology (Stuttgart, Germany)
researchProduct

Refitting Solutions Promoted by $$\ell _{12}$$ Sparse Analysis Regularizations with Block Penalties

2019

International audience; In inverse problems, the use of an l(12) analysis regularizer induces a bias in the estimated solution. We propose a general refitting framework for removing this artifact while keeping information of interest contained in the biased solution. This is done through the use of refitting block penalties that only act on the co-support of the estimation. Based on an analysis of related works in the literature, we propose a new penalty that is well suited for refitting purposes. We also present an efficient algorithmic method to obtain the refitted solution along with the original (biased) solution for any convex refitting block penalty. Experiments illustrate the good be…

Artifact (error)Total variationComputer scienceRegular polygon02 engineering and technologyInverse problem01 natural sciences[INFO.INFO-AI]Computer Science [cs]/Artificial Intelligence [cs.AI]010104 statistics & probabilityRefitting0202 electrical engineering electronic engineering information engineeringBias correction020201 artificial intelligence & image processingBias correction0101 mathematics[MATH]Mathematics [math]AlgorithmBlock (data storage)Scale Space and Variational Methods in Computer Vision - 7th International Conference, SSVM 2019, Hofgeismar, Germany, June 30 – July 4, 2019, Proceedings
researchProduct

Effects of Interobserver Variability on 2D and 3D CT- and MRI-Based Texture Feature Reproducibility of Cartilaginous Bone Tumors

2021

AbstractThis study aims to investigate the influence of interobserver manual segmentation variability on the reproducibility of 2D and 3D unenhanced computed tomography (CT)- and magnetic resonance imaging (MRI)-based texture analysis. Thirty patients with cartilaginous bone tumors (10 enchondromas, 10 atypical cartilaginous tumors, 10 chondrosarcomas) were retrospectively included. Three radiologists independently performed manual contour-focused segmentation on unenhanced CT and T1-weighted and T2-weighted MRI by drawing both a 2D region of interest (ROI) on the slice showing the largest tumor area and a 3D ROI including the whole tumor volume. Additionally, a marginal erosion was applied…

Artificial intelligenceFuture studiesIntraclass correlationChondrosarcomaBone NeoplasmsArticleRegion of interestNeoplasmsArtificial intelligence Chondroma Chondrosarcoma Neoplasms Radiomics Texture analysisHumansMedicineRadiology Nuclear Medicine and imagingSegmentationTexture featureRetrospective StudiesObserver VariationReproducibilityRadiomicsRadiological and Ultrasound Technologymedicine.diagnostic_testbusiness.industryReproducibility of ResultsMagnetic resonance imagingmedicine.diseaseMagnetic Resonance ImagingComputer Science ApplicationsTexture analysisFeature (computer vision)ChondrosarcomaTomography X-Ray ComputedbusinessNuclear medicineChondromaChondromaJournal of Digital Imaging
researchProduct

Ultradeep Sequencing Analysis of Population Dynamics of Virus Escape Mutants in RNAi-Mediated Resistant Plants

2012

Plant artificial micro-RNAs (amiRs) have been engineered to target viral genomes and induce their degradation. However, the exceptional evolutionary plasticity of RNA viruses threatens the durability of the resistance conferred by these amiRs. It has recently been shown that viral populations not experiencing strong selective pressure from an antiviral amiR may already contain enough genetic variability in the target sequence to escape plant resistance in an almost deterministic manner. Furthermore, it has also been shown that viral populations exposed to subinhibitory concentrations of the antiviral amiR speed up this process. In this article, we have characterized the molecular evolutiona…

Artificial micro-RNAsPopulation genetics[SDV]Life Sciences [q-bio]Population DynamicsPotyvirusStatistics as TopicPopulationMutantArabidopsisReplicationMirnasBiologyType-1VirusEvolution Molecular03 medical and health sciencesRNA interferenceInterfering rnasGeneticsSirnaseducationMolecular BiologyPhylogenyResearch ArticlesEcology Evolution Behavior and SystematicsPlant Diseases030304 developmental biologyInfluenza-VirusInhibitionGenetics0303 health scienceseducation.field_of_studyArtificial micrornasResistant plantsNucleotides030302 biochemistry & molecular biologyGenetic VariationHigh-Throughput Nucleotide SequencingSequence Analysis DNAVirologyVirus evolution3. Good healthMicroRNAsExperimental evolutionMutationNext-generation sequencingRNA InterferenceTranscription
researchProduct

On the geographical distribution of pseudocholinesterase variants.

1975

The incidence of pseudocholinesterase (PCHE equals E.C. 3.1.1.8) variants in samples of 8 different population (total of 2218 individuals) is reported. Together with previously mentioned data from the literature, a general survey on the geographical distribution of PCHE isoenzymes is given. Possible reasons for present-day heterogeneity of their distribution are also discussed. Concerning the incidence of the C5 variant, it is pointed out that the validity of applying population genetic models depends upon the accuracy of the genetic basis.

AsiaNative Hawaiian or Other Pacific IslanderGenotypePopulationDistribution (economics)IndiaBiologyGene FrequencyGenetic modelStatisticsGenetic variationCholinesterasesHumansAlleleeducationBulgariaAllele frequencyMolecular BiologyAlleleseducation.field_of_studybusiness.industryIncidence (epidemiology)Racial GroupsGermany WestGenetic VariationGeneral MedicineEuropeGenetics PopulationButyrylcholinesteraseAfricaAmericasbusinessHumangenetik
researchProduct

On the origin of mongrels: evolutionary history of free-breeding dogs in Eurasia

2015

Although a large part of the global domestic dog population is free-ranging and free-breeding, knowledge of genetic diversity in these free-breeding dogs (FBDs) and their ancestry relations to pure-breed dogs is limited, and the indigenous status of FBDs in Asia is still uncertain. We analyse genome-wide SNP variability of FBDs across Eurasia, and show that they display weak genetic structure and are genetically distinct from pure-breed dogs rather than constituting an admixture of breeds. Our results suggest that modern European breeds originated locally from European FBDs. East Asian and Arctic breeds show closest affinity to East Asian FBDs, and they both represent the earliest branching…

AsiaPopulationPolymorphism Single NucleotideGeneral Biochemistry Genetics and Molecular BiologyDogsGenetic variationAnimalsEast AsiaeducationResearch ArticlesGeneral Environmental ScienceGenetic diversityeducation.field_of_studyMiddle EastGeneral Immunology and MicrobiologyC182 EvolutionGenetic VariationGeneral MedicineBiological EvolutionGenealogyEuropePhylogeographyPhylogeographyGenetics PopulationAncient DNAGeographyEvolutionary biologyGenetic structureGeneral Agricultural and Biological SciencesGenome-Wide Association StudyProceedings of the Royal Society B: Biological Sciences
researchProduct

A molecular phylogeny of bullfinches Pyrrhula Brisson, 1760 (Aves: Fringillidae)

2011

Abstract We present a molecular phylogeny of bullfinches (Pyrrhula Brisson, 1760) based on 2357 bp DNA sequence information of mitochondrial genes (cyt-b, 16S rRNA) and nuclear introns (fib-7, GAPDH-11). The genus is clearly a monophyletic group. Within the limits of Pyrrhula, molecular methods support the subdivision of three main groups: (1) “Southeast-Asian bullfinches” (P. nipalensis and P. leucogenis), (2) “Himalayan bullfinches” (P. aurantiaca, P. erythaca, P. erythrocephala), and (3) “Eurasian bullfinches” (P. pyrrhula s.l.). Within the last group there are four different subgroups: (3a) P. (p.) murina, (3b) P. (p.) cineracea, (3c) P. (p.) griseiventris, and (3d) P. pyrrhula s.str. T…

AsiaPyrrhulaBiogeographyZoologyPinicolaBiologyDNA MitochondrialCoalescent theoryEvolution MolecularMonophylyGenusRNA Ribosomal 16SGeneticsAnimalsMolecular clockMolecular BiologyPhylogenyEcology Evolution Behavior and SystematicsCell NucleusGenetic VariationSequence Analysis DNAbiology.organism_classificationIntronsEuropeMolecular phylogeneticsFinchesMolecular Phylogenetics and Evolution
researchProduct

The Role of Recent Admixture in Forming the Contemporary West Eurasian Genomic Landscape

2015

Summary Over the past few years, studies of DNA isolated from human fossils and archaeological remains have generated considerable novel insight into the history of our species. Several landmark papers have described the genomes of ancient humans across West Eurasia, demonstrating the presence of large-scale, dynamic population movements over the last 10,000 years, such that ancestry across present-day populations is likely to be a mixture of several ancient groups [1, 2, 3, 4, 5, 6, 7]. While these efforts are bringing the details of West Eurasian prehistory into increasing focus, studies aimed at understanding the processes behind the generation of the current West Eurasian genetic landsc…

Asian Continental Ancestry GroupGene FlowGenetics and Molecular Biology (all)genetics and molecular biologyEvolutionHuman MigrationEuropean Continental Ancestry GroupPopulationSettore BIO/08 - ANTROPOLOGIABiologyDNA MitochondrialBiochemistryArticleWhite PeopleGeneral Biochemistry Genetics and Molecular BiologyEvolution MolecularArcheology Eurasia.Henomics AdmixtureAsian PeopleSettore BIO/13 - Biologia ApplicataReportGeneticsHumansComputer Simulationagricultural and biological sciencesPhylogenyAgricultural and Biological Sciences(all)Biochemistry Genetics and Molecular Biology(all)FossilsGenetic VariationMolecularDNAGenomicsMitochondrialAsian Continental Ancestry Group; Computer Simulation; DNA Mitochondrial; European Continental Ancestry Group; Fossils; Genetic Variation; Genetics Population; Genomics; Haplotypes; Humans; Phylogeny; Evolution Molecular; Gene Flow; Human Migration; Biochemistry Genetics and Molecular Biology (all); Agricultural and Biological Sciences (all)Genetics PopulationHaplotypesAgricultural and Biological Sciences (all)Evolutionary biologyadmixtureCurrent (fluid)agricultural and biological sciences; biochemistry; genetics and molecular biologyGeneral Agricultural and Biological ScienceseuropeCurrent Biology
researchProduct

Condensation nuclei at the German Antarctic Station “Georg von Neumayer”

1992

Evaluations of measurements of the tropospheric surface condensation nuclei at the German Antarctic station for the last 8 years are presented. They show clearly the annual variation of the concentration with a maximum in austral summer, as previously seen by other investigators. In addition, a pronounced increase of the concentration of 9.63% per year has been found. The size distributions of the condensation nuclei of measurements over 2 years are evaluated and discussed. On average, they are of mono-modal shape, but individually most of them show a bimodal shape. DOI: 10.1034/j.1600-0889.1992.00009.x

Atmospheric Science010504 meteorology & atmospheric sciencesMeteorology010501 environmental sciencesAtmospheric sciences01 natural scienceslanguage.human_languageTroposphereGermanlanguageCloud condensation nucleiEnvironmental scienceAnnual variation0105 earth and related environmental sciencesTellus B: Chemical and Physical Meteorology
researchProduct

Sun-Earth System Interaction studies over Vietnam: an international cooperative project

2006

International audience; During many past decades, scientists from various countries have studied separately the atmospheric motions in the lower atmosphere, in the Earth's magnetic field, in the magnetospheric currents, etc. All of these separate studies lead today to the global study of the Sun and Earth connections, and as a consequence, new scientific programs (IHY- International Heliophysical Year, CAWSES- Climate and Weather in the Sun-Earth System) are defined, in order to assume this new challenge. In the past, many scientists did not have the possibility to collect data at the same time in the various latitude and longitude sectors. Now, with the progress of geophysical sciences in …

Atmospheric Science010504 meteorology & atmospheric sciencesMeteorology[SDE.MCG]Environmental Sciences/Global ChangesContext (language use)Monsoon01 natural sciences[SDU.STU.CL] Sciences of the Universe [physics]/Earth Sciences/Climatology0103 physical sciencesEarth and Planetary Sciences (miscellaneous)lcsh:Science010303 astronomy & astrophysicsdiurnal to secular)0105 earth and related environmental sciences[SDU.OCEAN]Sciences of the Universe [physics]/Ocean Atmospherelcsh:QC801-809GeologyAstronomy and AstrophysicsEquatorial electrojetOrographylcsh:QC1-999International Heliophysical YearIonosphere (Electric fields and currents)lcsh:Geophysics. Cosmic physics[SDE.MCG] Environmental Sciences/Global Changes[ SDE.MCG ] Environmental Sciences/Global ChangesGeography13. Climate actionSpace and Planetary Science[SDU.STU.CL]Sciences of the Universe [physics]/Earth Sciences/ClimatologyGeomagnetism and paleomagnetism (Time variationsMeteorology and dynamics (Tropical meteorology)lcsh:QTropical cycloneIonosphere[ SDU.STU.CL ] Sciences of the Universe [physics]/Earth Sciences/ClimatologyLongitudelcsh:Physics
researchProduct