Search results for " algae"

Whole-genome characterization of Shewanella algae strain SYT3 isolated from seawater reveals insight into hemolysis.

2018

Aim: To describe the genomic characteristics of seawater-borne hemolytic Shewanella algae and its resistance genes. Materials & methods: Whole genome sequence of S. algae SYT3 was determined using llumina MiSeq platform. Multiple-database-based analysis was performed to identify the genetic background of its hemolytic activity and the antibiotic resistance genes. Results: S. algae SYT3 possesses a homolog of the hly operon involved in the synthesis of hemolysin. We also identified candidate genes associated with resistance to β-lactam antibiotics (bla OXA-55) and fluoroquinolone (qnrA3). Conclusion: The study provides an insight into the hemolytic activity of S. algae. Our findings als…

The hidden diversity of lichenized Trebouxiophyceae (Chlorophyta).

2018

The class Trebouxiophyceae is comprised of coccoid to ellipsoid unicells, filaments, blades and colony-forming species of green algae occurring in diverse terrestrial and aquatic environments. Some representatives have evolved parasitic heterotrophic lifestyles, others have been investigated for their biotechnological potential and others have evolved as integral components of lichen symbioses. In this review, we provide an overview of the current understanding of diversity, taxonomy and evolutionary context for the important lichen-forming algal class Trebouxiophyceae (Chlorophyta). In particular, we focus on members of the family Trebouxiaceae (Trebouxiales), the best-known, most widespre…

Analysis of the Transcriptome of the Red Seaweed Grateloupia imbricata with Emphasis on Reproductive Potential

2018

Grateloupia imbricata is an intertidal marine seaweed and candidate model organism for both industry and academic research, owing to its ability to produce raw materials such as carrageenan. Here we report on the transcriptome of G. imbricata with the aim of providing new insights into the metabolic pathways and other functional pathways related to the reproduction of Grateloupia species. Next-generation sequencing was carried out with subsequent de novo assembly and annotation using state-of-the-art bioinformatic protocols. The results show the presence of transcripts required for the uptake of glycerol, which is a specific carbon source for in vitro culture of G. imbricata and nucleotide …

2021

Gammarid amphipods are a crucial link connecting primary producers with secondary consumers, but little is known about their nutritional ecology. Here we asked how starvation and subsequent feeding on different nutritional quality algae influences fatty acid retention, compound-specific isotopic carbon fractionation, and biosynthesis of ω-3 and ω-6 polyunsaturated fatty acids (PUFA) in the relict gammarid amphipod Pallaseopsis quadrispinosa. The fatty acid profiles of P. quadrispinosa closely matched with those of the dietary green algae after only seven days of refeeding, whereas fatty acid patterns of P. quadrispinosa were less consistent with those of the diatom diet. This was mainly due…

Phytoplankton structure in different lake types in central Finland

1986

Phyloplankton structure and its relation to physical and chemical properties of the water was studied in 58 central Finnish lakes. The biomass ranged from 0.2 to 14.2 g m−3 and the number of taxa per sample ranged from 33 to 152. The lakes were grouped into 5 types according to their trophic state: eutrophic, dyseutrophic, mesotrophic, oligotrophic, and acid oligotrophic lakes. The average biomass in eutrophic lakes was 5.57 g m−3, in dyseutrophic 3.54 g m−3, 1.23 g m−3 in mesotrophic, 0.52 g m−3 in oligotrophic and 0.39 g −3 in acid oligotrophic lakes. The average number of taxa per sample in the corresponding lake types were 109. 1, 79.3, 97.9, 90.9 and 43.8, respectively. The phytoplankt…

Historical Contaminant Records from Sclerochronological Archives

2015

A number of marine and freshwater organisms, including scleractinian and proteinacious corals, coralline algae, sclerosponges, and bivalve mollusks, secrete skeletons that grow larger over time and may record environmental contaminants over the lifespan of an individual. Most of these organisms also form periodic growth patterns (growth increments, lines or bands) that can be used to accurately date contaminant archives produced from chemical or physical analysis of sequential skeletal samples (termed sclerochronology). The majority of records produced from these organisms thus far have focused on paleoclimate reconstructions, but there is a vast potential for information on changes in cont…

Mg/Ca ratios in coralline algae record northwest Atlantic temperature variations and North Atlantic Oscillation relationships

2010

Climate variability in the North Atlantic has been linked in part to the North Atlantic Oscillation (NAO). The NAO influences marine ecosystems in the northwestern Atlantic and transport variability of the cold Labrador Current. Understanding historic patterns of NAO variability requires long‐term and high‐resolution climate records that are not available from instrumental data. Here we present the first century‐scale proxy record of sea surface temperature (SST) variability from the Newfoundland shelf, a region from which other annual‐resolution shallow marine proxies are unavailable. The 116 year record was obtained from three sites along the eastern Newfoundland shelf using laser ablatio…

Freshening of the Alaska Coastal Current recorded by coralline algal Ba/Ca ratios

2011

Arctic Ocean freshening can exert a controlling influence on global climate, triggering strong feedbacks on ocean‐atmospheric processes and affecting the global cycling of the world’s oceans. Glacier‐fed ocean currents such as the Alaska Coastal Current are important sources of freshwater for the Bering Sea shelf, and may also influence the Arctic Ocean freshwater budget. Instrumental data indicate a multiyear freshening episode of the Alaska Coastal Current in the early 21st century. It is uncertain whether this freshening is part of natural multidecadal climate variability or a unique feature of anthropogenically induced warming. In order to answer this, a better understanding of past var…

Solar PAR and UVR modify the community composition and photosynthetic activity of sea ice algae

2015

The effects of increased photosynthetically active radiation (PAR) and ultraviolet radiation (UVR) on species diversity, biomass and photosynthetic activity were studied in fast ice algal communities. The experimental set-up consisted of nine 1.44 m(2) squares with three treatments: untreated with natural snow cover (UNT), snow-free (PAR + UVR) and snow-free ice covered with a UV screen (PAR). The total algal biomass, dominated by diatoms and dinoflagellates, increased in all treatments during the experiment. However, the smaller biomass growth in the top 10-cm layer of the PAR + UVR treatment compared with the PAR treatment indicated the negative effect of UVR. Scrippsiella complex (mainly…

Seasonal variation in total phenolic content of Dictyopteris polypodioides (Dictyotaceae) and Cystoseira amentacea (Sargassaceae) from the Sicilian c…

2014

This study focuses on the differences in total phenolic content and its seasonal variations in two temperate brown algae, Cystoseira amentacea (C. Agardh) Bory and Dictyopteris polypodioides (A.P. De Candolle) J.V. Lamouroux, inhabiting respectively the infralittoral fringe and the upper infralittoral zone. Phenolic compounds are secondary metabolites, found in almost all brown algal orders, that function as defense against grazers, epiphytes and UV radiation. Total phenolic content was determined colorimetrically with the Folin-Ciocalteu reagent. Results showed significant differences in total phenol content between D. polypodioides and C. amentacea with higher values observed in the first…