Search results for " element"

showing 10 items of 2679 documents

Diet and habitat use influence Hg and Cd transfer to fish and consequent biomagnification in a highly contaminated area: Augusta Bay (Mediterranean S…

2016

Abstract Total mercury (T-Hg) and cadmium (Cd) were measured in twenty species of fish to study their bioaccumulation patterns and trophodynamics in the Augusta Bay food web. Adult and juvenile fish were caught in 2012 in Priolo Bay, south of the Augusta harbour (Central Mediterranean Sea), which is known for the high trace element and polycyclic aromatic hydrocarbon contamination level. T-Hg concentration was found to significantly increase along δ15N and from pelagic to benthic sedentary fish, revealing a marked influence of trophic position and habitat use (sensu Harmelin 1987) on T-Hg accumulation within ichthyofauna. Cd showed the opposite pattern, in line with the higher trace element…

0106 biological sciencesFood ChainHealth Toxicology and MutagenesisBiomagnification010501 environmental sciencesBiologyToxicology01 natural sciencesZooplanktonMetals Contamination Fish Mercury Cadmium Stable isotopesMediterranean SeaAnimalsPolycyclic Aromatic HydrocarbonsEcosystem0105 earth and related environmental sciencesTrophic levelNitrogen IsotopesEcology010604 marine biology & hydrobiologyFishesPelagic zoneMercuryGeneral MedicineJuvenile fishPlanktonInvertebratesPollutionFood webDietTrace ElementsBaysBenthic zoneBayWater Pollutants ChemicalCadmiumEnvironmental MonitoringEnvironmental Pollution
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Element-specific behaviour and sediment properties modulate transfer and bioaccumulation of trace elements in a highly-contaminated area (Augusta Bay…

2017

Abstract High sediment contamination in the coastal area of Priolo Bay, adjacent to the highly-polluted Augusta Harbour, poses serious risks for the benthic communities inhabiting the area. Nevertheless, the transfer of trace elements and consequent bioaccumulation in the biota is an overlooked issue. This study aimed to assess the transfer and bioaccumulation patterns of As, Cd, Ni and Hg to the dominant macroalgae and benthic invertebrates of Priolo Bay. Results revealed different patterns among trace elements (TEs), not driven by sediment contamination but rather by element-specific behaviour coupled with sediment physicochemical properties. Specifically, As accumulated in macroalgae but…

0106 biological sciencesGeologic SedimentsEnvironmental EngineeringBenthoHealth Toxicology and Mutagenesis010501 environmental sciences01 natural sciencesRedoxBenthosMacroalgaeMediterranean SeaEnvironmental ChemistryAnimalsTOC0105 earth and related environmental sciencesInvertebrateTrophic levelMetal010604 marine biology & hydrobiologyPublic Health Environmental and Occupational HealthSedimentBiotaGeneral MedicineGeneral ChemistryMercurySeaweedPollutionBiotaInvertebratesTrace ElementsDietBaysBenthic zoneBioaccumulationEnvironmental chemistryEnvironmental scienceEnvironmental PollutionBayWater Pollutants ChemicalCadmiumEnvironmental Monitoring
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Root fungal endophytes: identity, phylogeny and roles in plant tolerance to metal stress.

2021

International audience; Metal trace elements accumulate in soils mainly because of anthropic activities, leading living organisms to develop strategies to handle metal toxicity. Plants often associate with root endophytic fungi, including nonmycorrhizal fungi, and some of these organisms are associated with metal tolerance. The lack of synthetic analyses of plant-endophyte-metal tripartite systems and the scant consideration for taxonomy led to this review aiming (1) to inventory non-mycorrhizal root fungal endophytes described with respect to their taxonomic diversity and (2) to determine the mutualistic roles of these plant-fungus associations under metal stress. More than 1500 species in…

0106 biological sciencesHypocrealesMetal toxicity[SDV.BID.SPT]Life Sciences [q-bio]/Biodiversity/Systematics Phylogenetics and taxonomy01 natural sciencesPlant RootsPlant use of endophytic fungi in defense03 medical and health sciencesAscomycotaPhylogeneticsBotanyGeneticsEndophytesPleosporalesSymbiosisEcology Evolution Behavior and SystematicsPhylogeny030304 developmental biology0303 health sciencesbiologyFungi15. Life on landPlantsbiology.organism_classificationInfectious Diseases[SDE]Environmental SciencesTaxonomy (biology)Metallic trace element Fungal endophytes Taxonomy Accumulation Mutualism Plant-fungi interactions010606 plant biology & botanyFungal biology
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Why ruminating ungulates chew sloppily: Biomechanics discern a phylogenetic pattern.

2019

Altres ajuts: "Beatriu de Pinos" 2014 - BP-A 00048 There is considerable debate regarding whether mandibular morphology in ungulates primarily reflects phylogenetic affinities or adaptation to specific diet. In an effort to help resolve this debate, we use three-dimensional finite element analysis (FEA) to assess the biomechanical performance of mandibles in eleven ungulate taxa with well-established but distinct dietary preferences. We found notable differences in the magnitude and the distribution of von Mises stress between Artiodactyla and Perissodactyla, with the latter displaying lower overall stress values. Additionally, within the order Artiodactyla the suborders Ruminantia and Tylo…

0106 biological sciencesMaleModels AnatomicUngulateScienceFinite Element AnalysisZoologyRhinocerosMandible010603 evolutionary biology01 natural sciencesbiomechanicsRuminantiaBite ForceEvolution Molecular03 medical and health sciencesImaging Three-DimensionalSpecies SpecificityAnimalsCluster AnalysisRuminatingFEAPerissodactylaPhylogeny030304 developmental biologyArtiodactylafunctional morphology0303 health sciencesMultidisciplinarybiologyQRReproducibility of ResultsRuminantsbiology.organism_classificationTylopodaBiomechanical PhenomenaDietBite force quotientPhylogenetic PatternMedicineMasticationFemaleAdaptationPloS one
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Genomic Analysis of European Drosophila melanogaster Populations Reveals Longitudinal Structure, Continent-Wide Selection, and Previously Unknown DNA…

2020

Genetic variation is the fuel of evolution, with standing genetic variation especially important for short-term evolution and local adaptation. To date, studies of spatiotemporal patterns of genetic variation in natural populations have been challenging, as comprehensive sampling is logistically difficult, and sequencing of entire populations costly. Here, we address these issues using a collaborative approach, sequencing 48 pooled population samples from 32 locations, and perform the first continent-wide genomic analysis of genetic variation in European Drosophila melanogaster. Our analyses uncover longitudinal population structure, provide evidence for continent-wide selective sweeps, ide…

0106 biological sciencesMaleincipient sexual isolationQH301 BiologyAcclimatizationADNGenome Insect01 natural sciencesPopulation genomicsAdaptation; Clines; Demography; Population genomics; Selection; SNPs; Structural variants; Acclimatization; Altitude; Animals; DNA Viruses; Drosophila melanogaster; Europe; Genome Mitochondrial; Haplotypes; Insect Viruses; Male; Phylogeography; Polymorphism Single Nucleotide; Genome Insect; Genomic Structural Variation; Microbiota; Selection GeneticSDG 13 - Climate ActionComputingMilieux_MISCELLANEOUSeducation.field_of_study0303 health sciencesAltitude[SDV.BID.EVO]Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE]PE&RCgeneettinen muunteluPhylogeographyDrosophila melanogasterLaboratory of GeneticsTransposable elementnorth-americanmahlakärpäsetSettore BIO/18 - GENETICAselectionLaboratorium voor Erfelijkheidsleeramino-acid polymorphism03 medical and health sciencesGeneticGeneticsAdaptation demographyMicrobiomeAdaptationPolymorphismeducationDrosophilaMolecular BiologySelectionEcology Evolution Behavior and SystematicsDemography[SDV.GEN.GPO]Life Sciences [q-bio]/Genetics/Populations and Evolution [q-bio.PE]DNAchemistryEvolutionary biologyGenome MitochondrialGenomic Structural Variationinversion in(3r)payneAdaptationPopulation genomicsStructural variantsGenètica[SDV.EE.IEO]Life Sciences [q-bio]/Ecology environment/Symbiosisadaptation demographyCandidate genenucleotide polymorphismAcademicSubjects/SCI01180chemistry.chemical_compoundMelanogaster2. Zero hungerGenomebiologyMicrobiotaSingle NucleotideClinesclinesMitochondrialEuropepopulaatiogenetiikkatransposable elementsDrosophila melanogasterSNPsnatural-populationspopulation genomicsPopulationnext-generationDrosòfila melanogasterInsect Viruses010603 evolutionary biologyPolymorphism Single NucleotideQH301latitudinal clineGenetic variationAnimalsSelection GeneticSelection (genetic algorithm)DiscoveriesLocal adaptation030304 developmental biologylife-historyAcademicSubjects/SCI01130DNA Virusesstructural variantsDASbiology.organism_classificationHaplotypes13. Climate actionperimä[SDE.BE]Environmental Sciences/Biodiversity and EcologyInsectDNAMolecular Biology and Evolution
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Rays hamper intrusive growth of vessel elements

2021

Key message In some circumstances vessel elements, both broad and narrow, enlarge only symplastically in tangential direction. Rays play a special role in regulating intrusive enlargement of vessel elements. Abstract The aim of this study was to analyse relations occurring between vessel elements and surrounding cells, i.e. susceptibility to separation of walls of cells occurring in the vicinity of vessel elements, with regard to their type—cells of the axial/radial system. On the basis of separation/lack of separation of cell walls, and thus change in cell contacts/lack of change in cell contacts, we have estimated the contribution of particular types of growth—intrusive and symplastic—in …

0106 biological sciencesMaterials science010504 meteorology & atmospheric sciencesEcologyPhysiologyRaySymplastic growthForestryPlant ScienceMechanicsVessel elementCambial derivatives01 natural sciencesRadial and axial systemsIntrusive growthVessel element010606 plant biology & botany0105 earth and related environmental sciencesTrees
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Spatial variations in Ba/Cashell fingerprints of Glycymeris pilosa along the eastern Adriatic Sea

2020

Abstract The long living Glycymeris pilosa bivalve is an interesting target species for the sclerochronological research in the Mediterranean Sea. In this study, Ba/Cashell and Mg/Cashell variations were studied along the coast of the eastern Adriatic Sea. Specimens were collected alive by SCUBA and skin diving during several occasions in 2014, 2015 and 2016 from five sites including Pag, Pasman Channel, Cetina, Živogosce and Drace. Element-to-Cashell ratios were measured by LA-ICP-MS in line scan mode in three specimens of each site, ranging in age from 7 to 21. In addition, chemical analysis was conducted on three ontogenetically older specimens (68-97 years-old) from Drace. Mg/Cashell an…

0106 biological sciencesMediterranean climateDelta010504 meteorology & atmospheric sciencesbiology010604 marine biology & hydrobiologyGrowth dataPilosachemistry.chemical_elementBariumAquatic ScienceOceanographybiology.organism_classification01 natural sciencesMediterranean seachemistrySclerochronology ; Elements ; Barium ; Bivalve ; MediterraneanSclerochronologyPhysical geographyGlycymeris pilosa0105 earth and related environmental sciencesEstuarine, Coastal and Shelf Science
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The gypsy database (GyDB) of mobile genetic elements: release 2.0

2011

This article introduces the second release of the Gypsy Database of Mobile Genetic Elements (GyDB 2.0): a research project devoted to the evolutionary dynamics of viruses and transposable elements based on their phylogenetic classification (per lineage and protein domain). The Gypsy Database (GyDB) is a long-term project that is continuously progressing, and that owing to the high molecular diversity of mobile elements requires to be completed in several stages. GyDB 2.0 has been powered with a wiki to allow other researchers participate in the project. The current database stage and scope are long terminal repeats (LTR) retroelements and relatives. GyDB 2.0 is an update based on the analys…

0106 biological sciencesProtein domainretroelementsLineage (evolution)[SDV]Life Sciences [q-bio]Retroviridae ProteinsCaulimoviridaeEukaryote evolutioncomputer.software_genrephylogeny01 natural sciencesDatabases GeneticRefSeqPhylogenyPriority journalbase de données0303 health sciencesRetrovirusPhylogenetic treeDatabaseSequence analysisdatabases geneticArticlesClassificationChemistryGenetic lineRetroelementsGenetic databaseComputer programBiologyArticleMobile genetic element03 medical and health sciencesLong terminal repeatWeb pagephylogénieVirus proteinGeneticsLife Science[SDV.BV]Life Sciences [q-bio]/Vegetal BiologyAccess to informationTransposon030304 developmental biologyretroelements;phylogeny;software;terminal repeat sequences;databases geneticHidden Markov modelCauliflower mosaic virusCaulimovirussoftwareRetroposonTerminal Repeat SequencesDNA structureInterspersed Repetitive Sequencesterminal repeat sequencesNonhumanRetroviridaeData analysis softwareGenetic variabilityMobile genetic elementscomputerLENGUAJES Y SISTEMAS INFORMATICOSSoftware010606 plant biology & botanyPhylogenetic nomenclaturePhylogenetic tree
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The Medicago truncatula sucrose transporter family: characterization and implication of key members in carbon partitioning towards arbuscular mycorrh…

2012

We identified de novo sucrose transporter (SUT) genes involved in long-distance transport of sucrose from photosynthetic source leaves towards sink organs in the model leguminous species Medicago truncatula. The iden- tification and functional analysis of sugar transporters provide key information on mechanisms that underlie carbon partitioning in plant-microorganism interactions. In that way, full-length sequences of the M. truncatula SUT (MtSUT) family were retrieved and biochemical characterization of MtSUT members was performed by heterologous expression in yeast. The MtSUT family now comprises six genes which distribute among Dicotyledonous clades. MtSUT1-1 and MtSUT4-1 are key members…

0106 biological sciencesSucrose[SDV]Life Sciences [q-bio]Plant Science01 natural sciencesSIEVE ELEMENTSchemistry.chemical_compoundGene Expression Regulation Plantsucrose transporterMycorrhizaePHLOEMROOTSPlant Proteins2. Zero hungerRegulation of gene expression0303 health sciencesPHOSPHATE TRANSPORTERbiologyfood and beveragesARABIDOPSISSUTMedicago truncatulasugar partitioning[SDE]Environmental Sciencessugar transportGlomus intraradicesEXPRESSIONTOMATO SUGAR TRANSPORTERMolecular Sequence DataGENE FAMILYPhosphates03 medical and health sciencesSymbiosisBotanyMedicago truncatula[SDV.BV]Life Sciences [q-bio]/Vegetal BiologyPLANTSSugarGlomeromycotaSymbiosisGeneMolecular Biology030304 developmental biologyfungiMembrane Transport Proteins15. Life on landbiology.organism_classificationMONOSACCHARIDE TRANSPORTERYeastCarbonchemistryHeterologous expression010606 plant biology & botanyMolecular plant
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Genome sequence of the pea aphid Acyrthosiphon pisum

2010

The genome of the pea aphid shows remarkable levels of gene duplication and equally remarkable gene absences that shed light on aspects of aphid biology, most especially its symbiosis with Buchnera.

0106 biological sciencesTANDEM REPEATSGenome InsectGene TransferRRES175Sequència genòmicaFaculty of Science\Computer ScienceCPG METHYLATION01 natural sciencesGenomeMedical and Health SciencesInternational Aphid Genomics ConsortiumBiologiska vetenskaperBiology (General)GENE-EXPRESSION2. Zero hungerGenetics0303 health sciencesAphidGenomeAfídidsGeneral NeuroscienceGENOME SEQUENCEfood and beveragesDROSOPHILA CIRCADIAN CLOCKBiological SciencesGenetics and Genomics/Microbial Evolution and GenomicsINSECTEGenètica microbianapuceronAPIS-MELLIFERAGeneral Agricultural and Biological SciencesInfectionsymbioseBiotechnologyResearch ArticleVIRUS VECTORING175_GeneticsSYMBIOTIC BACTERIAGene Transfer HorizontalQH301-705.5ACYRTHOSIPHON PISUMBiologyHOLOMETABOLOUS INSECTSHOST-PLANT010603 evolutionary biologyGENOME SEQUENCE;PEA APHID;ACYRTHOSIPHON PISUM;INSECT-PLANT;HOST-PLANT;VIRUS VECTORING;PHENOTYPIC PLASTICITY;HOLOMETABOLOUS INSECTS;INSECTE;RAVAGEUR DES CULTURES; SOCIAL INSECTGeneral Biochemistry Genetics and Molecular BiologyHorizontal03 medical and health sciencesBuchneraPHENOTYPIC PLASTICITYINSECT-PLANTGeneticsGene familyLife ScienceAnimalsSymbiosisGene030304 developmental biologyWhole genome sequencingGeneral Immunology and MicrobiologyAnnotation; Aphid; Genome sequenceAgricultural and Veterinary Sciences175_EntomologyGenètica animalBacteriocytegénomegèneHuman GenomePEA APHIDBiology and Life Sciences15. Life on landbiochemical phenomena metabolism and nutritionbiology.organism_classificationREPETITIVE ELEMENTSDNA-SEQUENCESAcyrthosiphon pisumGenome SequenceGenetics and Genomics/Genome ProjectsRAVAGEUR DES CULTURESAphidsPHEROMONE-BINDINGBuchneraInsectDevelopmental Biology[SDV.EE.IEO]Life Sciences [q-bio]/Ecology environment/Symbiosis
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