Search results for " genetics"

showing 10 items of 4169 documents

Phylogeographic patterns of steppe species in Eastern Central Europe: a review and the implications for conservation

2016

The phylogeography of species associated with European steppes and extrazonal xeric grasslands is poorly understood. This paper summarizes the results of recent studies on the phylogeography and conservation genetics of animals (20 taxa of beetles, butterflies, reptiles and rodents) and flowering plants (18 taxa) of such, "steppic" habitats in Eastern Central Europe. Most species show a similar phylogeographic pattern: relatively high genetic similarity within regional groups of populations and moderate-to-high genetic distinctiveness of populations from currently isolated regions located in the studied area. This distinctiveness of populations suggests a survival here during glacial maxima…

0106 biological sciences0301 basic medicineConservation geneticsgeographyExtinctiongeography.geographical_feature_categoryEcologyEcologySteppeBiogeographyBiodiversityBiology010603 evolutionary biology01 natural sciencesBiogeography Genetics Glacial Interglacial Refugium Xeric grassland03 medical and health sciencesPhylogeography030104 developmental biologyRefugium (population biology)HabitatEcology Evolution Behavior and SystematicsNature and Landscape ConservationBiodiversity and Conservation
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Ecological plant epigenetics: Evidence from model and non-model species, and the way forward

2017

Growing evidence shows that epigenetic mechanisms contribute to complex traits, with implications across many fields of biology. In plant ecology, recent studies have attempted to merge ecological experiments with epigenetic analyses to elucidate the contribution of epigenetics to plant phenotypes, stress responses, adaptation to habitat, and range distributions. While there has been some progress in revealing the role of epigenetics in ecological processes, studies with non-model species have so far been limited to describing broad patterns based on anonymous markers of DNA methylation. In contrast, studies with model species have benefited from powerful genomic resources, which contribute…

0106 biological sciences0301 basic medicineEPIGENOMIC DIVERSITY[SDV]Life Sciences [q-bio]Species distributionINDIVIDUAL VARIATIONPhenotypic plasticity01 natural sciencesGenomephenotypic plasticityEpigenesis GeneticDNA METHYLATION VARIATIONComputingMilieux_MISCELLANEOUS0303 health sciencesEcologyEcologybioinformatiikkagenomiikkaGenomicsPlantsBioinformatics; ecological epigenetics; genomics; phenotypic plasticity; response to environment; Ecology Evolution Behavior and Systematics[SDV.BIBS]Life Sciences [q-bio]/Quantitative Methods [q-bio.QM]HabitatepigenetiikkainternationalPHYSCOMITRELLA-PATENSresponse to environmentPERENNIAL HERBkasviekologiaEcological epigeneticsSEQUENCING DATAEvolutionBioinformaticsEcology (disciplines)GenomicsBiology010603 evolutionary biology[SDV.GEN.GPL]Life Sciences [q-bio]/Genetics/Plants genetics03 medical and health sciencesPolyploidBehavior and SystematicskasvitEpigeneticsEcosystemEcology Evolution Behavior and Systematics030304 developmental biologyHERB HELLEBORUS-FOETIDUSPhenotypic plasticityBioinformatics ; Ecological Epigenetics ; Genomics ; Phenotypic Plasticity ; Response To EnvironmentAmbientaleResponse to environmentDNA Methylation15. Life on landEcological realismPlant ecology030104 developmental biologyARABIDOPSIS-THALIANABioinformatics ecological epigenetics genomics phenotypic plasticity response to environmentAdaptation[SDE.BE]Environmental Sciences/Biodiversity and EcologyNATURAL-POPULATIONS
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Understanding processes at the origin of species flocks with a focus on the marine Antarctic fauna

2017

Species flocks (SFs) fascinate evolutionary biologists who wonder whether such striking diversification can be driven by normal evolutionary processes. Multiple definitions of SFs have hindered the study of their origins. Previous studies identified a monophyletic taxon as a SF if it displays high speciosity in an area in which it is endemic (criterion 1), high ecological diversity among species (criterion 2), and if it dominates the habitat in terms of biomass (criterion 3); we used these criteria in our analyses. Our starting hypothesis is that normal evolutionary processes may provide a sufficient explanation for most SFs. We thus clearly separate each criterion and identify which biolog…

0106 biological sciences0301 basic medicineEcological nicheEcologyAllopatric speciation15. Life on landBiology010603 evolutionary biology01 natural sciencesGeneral Biochemistry Genetics and Molecular BiologyEcological speciationLife history theory03 medical and health sciences030104 developmental biologyAdaptive radiationDominance (ecology)Biological dispersal14. Life underwaterEcosystem diversityGeneral Agricultural and Biological SciencesBiological Reviews
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2017

This article reviews research on the evolutionary mechanisms leading to different transmission modes. Such modes are often under genetic control of the host or the pathogen, and often in conflict with each other via trade-offs. Transmission modes may vary among pathogen strains and among host populations. Evolutionary changes in transmission mode have been inferred through experimental and phylogenetic studies, including changes in transmission associated with host shifts and with evolution of the unusually complex life cycles of many parasites. Understanding the forces that determine the evolution of particular transmission modes presents a fascinating medley of problems for which there is…

0106 biological sciences0301 basic medicineEcologyPhylogenetic studyPopulation geneticsBiological evolutionBiology010603 evolutionary biology01 natural sciencesData scienceGeneral Biochemistry Genetics and Molecular Biology03 medical and health sciences030104 developmental biologyExtant taxonEvolutionary ecologyParasite transmissionGeneral Agricultural and Biological SciencesHorizontal transmissionPhilosophical Transactions of the Royal Society B: Biological Sciences
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The evolutionary ecology of deception

2015

Through dishonest signals or actions, individuals often misinform others to their own benefit. We review recent literature to explore the evolutionary and ecological conditions for deception to be more likely to evolve and be maintained. We identify four conditions: (1) high misinformation potential through perceptual constraints of perceiver; (2) costs and benefits of responding to deception; (3) asymmetric power relationships between individuals and (4) exploitation of common goods. We discuss behavioural and physiological mechanisms that form a deception continuum from secrecy to overt signals. Deceptive tactics usually succeed by being rare and are often evolving under co-evolutionary a…

0106 biological sciences0301 basic medicineEcologymedia_common.quotation_subjectDeception010603 evolutionary biology01 natural sciencesGeneral Biochemistry Genetics and Molecular BiologySexual conflict03 medical and health sciences030104 developmental biologyConceptual frameworkPerceptionSecrecyMimicryEvolutionary ecologyMisinformationGeneral Agricultural and Biological SciencesPsychologyCognitive psychologymedia_commonBiological Reviews
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Not all sex ratios are equal : the Fisher condition, parental care and sexual selection

2017

The term ‘sex roles’ encapsulates male–female differences in mate searching, competitive traits that increase mating/fertilization opportunities, choosiness about mates and parental care. Theoretical models suggest that biased sex ratios drive the evolution of sex roles. To model sex role evolution, it is essential to note that in most sexually reproducing species (haplodiploid insects are an exception), each offspring has one father and one mother. Consequently, the total number of offspring produced by each sex is identical, so the mean number of offspring produced by individuals of each sex depends on the sex ratio (Fisher condition). Similarly, the total number of heterosexual matings …

0106 biological sciences0301 basic medicineEvolution of sexual reproductionOffspringparental careBiologyModels Biological010603 evolutionary biology01 natural sciencesGeneral Biochemistry Genetics and Molecular Biology03 medical and health sciencesAnimalsHumanssexual selectionSex RatioMatingMaternal Behavior10. No inequalityPaternal BehaviorSex allocationGender Identitysex ratiosArticlesMating Preference AnimalFisher condition030104 developmental biologyMate choicesukupuolivalintaSexual selectionta1181General Agricultural and Biological SciencesPaternal careSex ratioDemographyPhilosophical Transactions of the Royal Society B: Biological Sciences
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Ant behaviour and brain gene expression of defending hosts depend on the ecological success of the intruding social parasite.

2019

The geographical mosaic theory of coevolution predicts that species interactions vary between locales. Depending on who leads the coevolutionary arms race, the effectivity of parasite attack or host defence strategies will explain parasite prevalence. Here, we compare behaviour and brain transcriptomes of Temnothorax longispinosus ant workers when defending their nest against an invading social parasite, the slavemaking ant Temnothorax americanus . A full-factorial design allowed us to test whether behaviour and gene expression are linked to parasite pressure on host populations or to the ecological success of parasite populations. Albeit host defences had been shown before to covary with …

0106 biological sciences0301 basic medicineGene ExpressionBiology010603 evolutionary biology01 natural sciencesGeneral Biochemistry Genetics and Molecular BiologyHost-Parasite InteractionsNesting Behavior03 medical and health sciencesEvolutionary arms raceNestParasite hostingAnimalsSocial BehaviorCoevolutionRegulation of gene expressionBrood parasiteEcologyHost (biology)AntsBrainTemnothorax americanusArticlesbiology.organism_classification030104 developmental biologyGeneral Agricultural and Biological SciencesPhilosophical transactions of the Royal Society of London. Series B, Biological sciences
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Demographic history has shaped the strongly differentiated corkwing wrasse populations in Northern Europe

2019

Understanding the biological processes involved in genetic differentiation and divergence between populations within species is a pivotal aim in evolutionary biology. One particular phenomenon that requires clarification is the maintenance of genetic barriers despite the high potential for gene flow in the marine environment. Such patterns have been attributed to limited dispersal or local adaptation, and to a lesser extent to the demographic history of the species. The corkwing wrasse (Symphodus melops) is an example of a marine fish species where regions of particular strong divergence are observed. One such genetic break occurred at a surprisingly small spatial scale (FST ~0.1), over a s…

0106 biological sciences0301 basic medicineGene FlowMaleReproductive IsolationDemographic historyphylogeography010603 evolutionary biology01 natural sciencesGene flow03 medical and health sciencesGenetic driftGeneticsAnimals14. Life underwaterEcology Evolution Behavior and Systematicspopulation genetics—empiricalLocal adaptationDemographyfishGenomebiologyEcologyGenetic DriftFisheslandscape geneticsVDP::Matematikk og Naturvitenskap: 400Reproductive isolationVDP::Mathematics and natural science: 400::Zoology and botany: 480::Zoogeography: 486VDP::Matematikk og Naturvitenskap: 400::Zoologiske og botaniske fag: 480::Zoogeografi: 486biology.organism_classificationEuropePhylogeography030104 developmental biologyaquacultureEvolutionary biologyBiological dispersalFemaleCorkwing wrasse
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The influence of slavemaking lifestyle, caste and sex on chemical profiles in Temnothorax ants: insights into the evolution of cuticular hydrocarbons

2017

Chemical communication is central for the formation and maintenance of insect societies. Generally, social insects only allow nest-mates into their colony, which are recognized by their cuticular hydrocarbons (CHCs). Social parasites, which exploit insect societies, are selected to circumvent host recognition. Here, we studied whether chemical strategies to reduce recognition evolved convergently in slavemaking ants, and whether they extend to workers, queens and males alike. We studied CHCs of three social parasites and their related hosts to investigate whether the parasitic lifestyle selects for specific chemical traits that reduce host recognition. Slavemaker profiles were characterize…

0106 biological sciences0301 basic medicineGeneral Immunology and MicrobiologyTemnothoraxbiologyEcologyHost (biology)media_common.quotation_subjectCasteZoologyGeneral MedicineInsectbiology.organism_classificationChemical communication010603 evolutionary biology01 natural sciencesGeneral Biochemistry Genetics and Molecular Biology03 medical and health sciences030104 developmental biologyHost–parasite coevolutionConvergent evolutionGeneral Agricultural and Biological SciencesGeneral Environmental Sciencemedia_commonProceedings of the Royal Society B: Biological Sciences
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2017

Targeted high-throughput sequencing using hybrid-enrichment offers a promising source of data for inferring multiple, meaningfully resolved, independent gene trees suitable to address challenging phylogenetic problems in species complexes and rapid radiations. The targets in question can either be adopted directly from more or less universal tools, or custom made for particular clades at considerably greater effort. We applied custom made scripts to select sets of homologous sequence markers from transcriptome and WGS data for use in the flowering plant genus Erica (Ericaceae). We compared the resulting targets to those that would be selected both using different available tools (Hyb-Seq; M…

0106 biological sciences0301 basic medicineGeneticsMeasure (data warehouse)Phylogenetic treeGeneral NeuroscienceGeneral MedicineComputational biologyBiology010603 evolutionary biology01 natural sciencesGenomeGeneral Biochemistry Genetics and Molecular BiologyDNA sequencing03 medical and health sciences030104 developmental biologyTaxonPhylogeneticsPhylogenomicsGeneral Agricultural and Biological SciencesCladePeerJ
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