Search results for " hydrogen bond"

showing 10 items of 68 documents

Stereoelectronic Properties of N-acetyl-α,β-dehydroamino acid N′-methylamides

1998

α,β-Dehydroamino acids are useful peptide modifiers. However, their stereoelectronic properties still remain insufficiently recognized. Based on FTIR experiments in the range of νs(N-H), AI, AII and νs(Cα=Cβ) and ab initio calculations with B3LYP/6-31G*, we studied the solution conformational preferences and the amide electron density perturbation of Ac-ΔXaa-NHMe, where ΔXaa = ΔAla, (E)-ΔAbu, (Z)-ΔAbu, (Z)-ΔLeu, (Z)-ΔPhe and ΔVal. Each of these dehydroamides adopts a C5 structure, which in Ac-ΔAla-NHMe is fully extended and accompanied by the strong C5 hydrogen bond. Interaction with bond Cα=Cβ lessens the amidic resonance within the flanking amide groups. The N-terminal C=O bond is noticea…

FTIR spectroscopysolution peptide conformationamidic resonanceC5 hydrogen bondC5 conformationdensity functional theoryInternational Journal of Peptide Research and Therapeutics
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Crystal structure and Hirshfeld surface analysis of (E)-4-chloro-N-{2-[2-(4-nitro­benzyl­idene)hydrazin-1-yl]-2-oxoeth­yl}benzene­sulfonamide N,N-di­…

2018

Reaction of N-(4-chloro­benzene­sulfon­yl)glycinyl hydrazide with 4-nitro­benzaldehyde gives the N,N-di­methyl­formamide monosolvated N-acyl­hydrazone derivative, (E)-N-{2-[2-(4-nitro­benzyl­idene)- hydrazine-1-yl]-2-oxoeth­yl}-4-χhloro­benzene­sulfonamide. Rings of (10) and (11) graph-set motifs are formed in the crystal structure by N—H⋯O and C—H⋯O hydrogen bonds. The two-dimensional fingerprint (FP) plots for significant inter­molecular inter­actions indicate that the greatest contribution is from the O⋯H/H⋯O contacts (31.3%), corresponding to N⋯H⋯O/C⋯H⋯O inter­actions.

Formamidecrystal structureHydrazoneCrystal structureDihedral angle010402 general chemistry010403 inorganic & nuclear chemistryRing (chemistry)01 natural sciencesMedicinal chemistryResearch Communicationslcsh:Chemistrychemistry.chemical_compoundhydrazoneHirshfeld surface analysisGeneral Materials Sciencechemistry.chemical_classificationSchiff baseHydrogen bondinter­molecular hydrogen bondsAromaticityGeneral ChemistryCondensed Matter Physics0104 chemical sciencesintermolecular hydrogen bondslcsh:QD1-999chemistryinversion dimersActa Crystallographica Section E: Crystallographic Communications
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Structure and vibrational features of the protic ionic liquid 1,8-diazabicyclo[5.4.0]-undec-7-ene-8-ium bis(trifluoromethanesulfonyl)amide, [DBUH][TF…

2022

Abstract The Protic Ionic Liquid (PIL) formed by neutralization of the super-strong base 1,7-diazabicyclo[5.4.0]undec-7-ene (DBU) with the super-strong acid bis(trifluoromethanesulfonyl)-imide (TFSI), indicated as [DBUH][TFSI], has been investigated. Its chemical physical properties and structural features have been explored using a synergy of experimental and computational tools. Molecular Dynamics-rationalised X-ray diffraction patterns highlight the major role played by hydrogen bonding (HB) in affecting morphology in this PIL. A comparison between HB features in this and in related PILs has been presented, on the base of far-IR experiments and DFT analysis. Indications of a weaker HB in…

Hydrogen bondingMaterials scienceProtic Ionic LiquidBase (chemistry)DFT calculationMolecular Dynamics010402 general chemistry01 natural scienceschemistry.chemical_compoundDFT calculation; Far-ir spectroscopy; Hydrogen bonding; Molecular Dynamics; Protic Ionic Liquid; X-ray scatteringPhase (matter)Materials ChemistryFar-ir spectroscopyPhysical and Theoretical ChemistryConformational isomerismSpectroscopychemistry.chemical_classification010405 organic chemistryHydrogen bondX-ray scatteringCondensed Matter PhysicsAtomic and Molecular Physics and Optics0104 chemical sciencesElectronic Optical and Magnetic MaterialsCrystallography18-Diazabicyclo[5.4.0]undec-7-enechemistryAbsorption bandIonic liquidDispersion (chemistry)Journal of Molecular Liquids
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Bioconjugates of 1’-Aminoferrocene-1-carboxylic Acid with (S)-3-Amino-2-methylpropanoic Acid and L-Alanine

2010

Formal CH 2 insertion in bioconjugates composed of 1'-aminoferrocene-1-carboxylic acid (Fca) and alanine Boc-Ala-Fca-Ala-OCH 3 gives Fca bioconjugates with the β-amino acid (S)-3-amino-2-methylpropanoic acid (Aib). The novel homologous conjugates of ferrocene were fully characterized by spectroscopic and analytical methods. NMR, CD and IR spectroscopy in concert with DFT calculations suggest that the formal "L-Ala-to-(S)-β-Aib mutations" can exert ferrocene helix inversion due to the different stereogenic carbon atoms of L -Ala and (S)-β-Aib. Furthermore, the mutation (de-)stabilizes the conserved secondary structure with two intramolecular hydrogen bonds, depending on the "mutation site". …

Inorganic ChemistryAlaninechemistry.chemical_compoundbioorganometallic chemistry ; beta-amino acid ; ferrocene ; hydrogen bonds ; conformational analysisFerroceneChemistryHydrogen bondStereochemistryIntramolecular forceHelixMetalloceneProtein secondary structureStereocenter
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Conformational Analysis of beta-Lactam-Containing Ferrocene Peptides

2009

The homochiral 3-amino-1-(4-methoxyphenyl)-4-phenyl-beta-lactam (≡ Alm) was conjugated with Boc-Ala giving Ala-Alm (9) after Boc-deprotection (Boc = tert-butoxycarbonyl, Ala = alanine). Coupling of FcCOOH (1) and Boc-Fca (10) with “ dipeptide” 9 resulted in the formation of FcCO-Ala-Alm (12) and the trisamide Boc-Fca-Ala-Alm (13), respectively (Fc = ferrocenyl, Fca = 1’ -aminoferrocene-1-carboxylic acid). The reactions were accomplished by the HOBt/EDC procedure and the products were obtained in good yields (HOBt = 1-hydroxybenzotriazole, EDC = N-(3-dimethylaminopropyl)-N’ -ethylcarbodiimide hydrochloride). Symmetrically 1, 1’ -disubstituted “ tetrapeptide” Fn(CO-Ala-Alm)2 (14) was prepared…

Inorganic Chemistryconformation analysis ; density functional calculations ; hydrogen bonds ; metallocenes ; molecular modelingchemistry.chemical_compoundDipeptidechemistryMolecular modelTetrapeptideFerroceneHydrogen bondStereochemistryIntramolecular forceLactamConjugated system
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Halogenido ligand exchange synthesis, spectroscopic properties and thermal behaviour of the inorganic–organic hydrogen-bonded network solid [4,4′-H2b…

2014

Abstract Dark-red single crystals of 4,4′-bipyridinium triaquahydrogen(1+) hexabromidorhodate(III) [4,4′-H2bipy][H7O3][RhBr6] (1) have been synthesized by a diffusion-controlled ligand exchange process from rhodium(III) chloride trihydrate and 4,4′-bipyridine dissolved in hydrochloric and hydrobromic acid, respectively. 1 could be considered as an inorganic–organic hydrogen-bonded network solid built up from the inorganic isolated hexabromidorhodate [RhBr6]3− octahedra, organic 4,4′-bipyridinium(2+) [4,4′-H2bipy]2+ and triaquahydrogen(1+) [H7O3]+ cations with nearly symmetrical O⋯O distances. The oppositely charged components in the structure of 1 are bound together by an intricate system o…

LigandHydrogen bondChemistryIonic bondingchemistry.chemical_elementCrystal structureRhodiumInorganic Chemistrychemistry.chemical_compoundCrystallographyOctahedronMaterials ChemistryDiffusion-controlled reaction; Hybrid materials; Hexahalogenidorhodates(III); Hydrogen bonding; Dehydration; DehydrobrominationOrganic chemistryHydrobromic acidPhysical and Theoretical ChemistryHybrid materialPolyhedron
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Crystal structure and magnetism of Co(HPO3)⋅H2O : A novel layered compound of Co(II)

1990

Under the terms of the Creative Commons Attribution (CC BY) license to their work.-- et al.

Magnetic PropertiesMagnetismGeneral Physics and AstronomyCrystal structureMagnetic Susceptibility:FÍSICA [UNESCO]HydratesMedium TemperatureMagnetic structureChemistryCritical ExponentsUNESCO::FÍSICASpace groupHydrogen BondsMagnetic susceptibilityCobalt Compounds ; Acid Phosphates ; Hydrates ; Layers ; Crystal Structure ; Magnetic Properties ; Lattice Parameters ; Space Groups ; Hydrogen Bonds ; Magnetic Susceptibility ; Magnetic Structure ; Critical Exponents ; Ising Model ; Medium TemperatureCrystallographySpace GroupsIsing ModelOctahedronAcid PhosphatesCrystal StructureLattice ParametersIsing modelMagnetic StructureCobalt CompoundsLayersCritical exponent
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Mesogens with Aggregation-Induced Emission Formed by Hydrogen Bonding

2019

In this contribution, we report a supramolecular approach toward mesogens showing aggregation-induced emission (AIE). AIE-active aromatic thioethers, acting as hydrogen-bond donors, were combined with alkoxystilbazoles as hydrogen-bond acceptors. Upon self-assembly, hydrogen-bonded complexes with monotropic liquid crystalline behavior were obtained. In addition, it was found that the introduction of a chiral citronellyl side chain leads to drastic bathochromic shift of the emission, which was not observed for linear alkyl chains. The mesomorphic behavior, as well as the photophysical properties as a solid and in the mesophase of the liquid crystalline assemblies, were studied in detail.

Materials scienceHydrogen bondGeneral Chemical EngineeringChemieBiomedical EngineeringSupramolecular chemistryGeneral Materials ScienceSettore CHIM/07 - Fondamenti Chimici Delle TecnologieAggregation-induced emissionPhotochemistryAggregation-Induced-Emission Hydrogen Bonding Liquid Crystals Supramolecular Chemistry Computational ChemistryACS Materials Letters
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Photo-switching and -cyclisation of hydrogen bonded liquid crystals based on resveratrol

2020

A series of hydrogen-bonded liquid crystals based on resveratrol and resveratrone is reported and investigated with respect to their photo-switchability (at 405 nm) and photo-cyclisation (at 300 nm).

Materials scienceHydrogenMetals and AlloysChemiechemistry.chemical_elementGeneral ChemistryResveratrolPhotochemistryCatalysisSurfaces Coatings and FilmsElectronic Optical and Magnetic Materialschemistry.chemical_compoundchemistryLiquid crystalMaterials ChemistryCeramics and CompositesSettore CHIM/07 - Fondamenti Chimici Delle TecnologiePhotoswitching Liquid Crystals Hydrogen Bonding Packing Analysis
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Chiral mesophases of hydrogen-bonded liquid crystals

2020

The chiral induction in hydrogen-bonded liquid crystals is investigated. The experimental study was accompanied by detailed density functional theory calculations and variable-temperature solid-state deuteron NMR measurements indicating that interactions between the linking groups of the hydrogen-bond accepting unit play a key role in the chiral induction.

Materials scienceHydrogenProcess Chemistry and TechnologyBiomedical EngineeringChemieEnergy Engineering and Power Technologychemistry.chemical_element02 engineering and technology010402 general chemistry021001 nanoscience & nanotechnology01 natural sciencesIndustrial and Manufacturing Engineering0104 chemical sciencesCrystallographychemistryDeuteriumChemistry (miscellaneous)Liquid crystalMaterials ChemistryChemical Engineering (miscellaneous)Supramolecular Chemistry Liquid Crystals Chirality Hydrogen Bonding Crystal EngineeringDensity functional theorySettore CHIM/07 - Fondamenti Chimici Delle Tecnologie0210 nano-technologyChiral induction
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