Search results for " mitochondria."

showing 10 items of 557 documents

Evidence of a highly complex phylogeographic structure on a specialist river bird species, the dipper (Cinclus cinclus)

2008

This study details the phylogeographic pattern of the white-throated dipper (Cinclus cinclus), a Palearctic, temperate, passerine bird that is exclusively associated with flowing water. Our results reveal a complex phylogeographic structure with at least five distinct lineages for the Western Palearctic region. As for many species of the Western Palearctic fauna and flora, this genetic structure is probably linked to the isolation of populations in different southern refuges during glacial periods. Furthermore, the isolation of populations in Scandinavia and/or Eastern regions, but also in Morocco and probably in Corsica, was accentuated by ecological and biogeographic barriers during Quate…

0106 biological sciencesFauna[SDV]Life Sciences [q-bio]Settore BIO/05 - ZoologiaSubspecies01 natural sciencesPHYLOGEOGRAPHYIce ageGlacial periodPasseriformesPhylogenyComputingMilieux_MISCELLANEOUS0303 health scienceseducation.field_of_studyLikelihood FunctionsGLACIAL REFUGEbiologyGeographyEcologyGLACIATION QUATERNAIRECytochromes bMitochondriaEuropeGenes MitochondrialInterglacialCinclus cinclus; Glacial refuges; Mitochondrial DNA; Phylogeography; Quaternary glaciations; TaxonomyMITOCHONDRIAL DNAGenetic MarkersCinclus cincluPopulation010603 evolutionary biologyDNA MitochondrialEvolution Molecular03 medical and health sciencesGeneticsAnimalseducationMolecular BiologyEcology Evolution Behavior and Systematics030304 developmental biology[SDV.GEN]Life Sciences [q-bio]/GeneticsGenetic VariationSequence Analysis DNA15. Life on landTAXONOMYbiology.organism_classificationPhylogeographyGenetics PopulationCINCLUS CINCLUSCinclus cinclusQUATERNARY GLACIATIONSequence Alignment
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Molecular markers linked to breeding system differences in segregating and natural populations of the cereal aphid Rhopalosiphum padi L.

1999

The aphid Rhopalosiphum padi shows coexistence of sexual and asexual populations, providing an opportunity to study the evolution of breeding system variation in the context of theories on the origin and maintenance of sex. However, assessments of the distribution of sexual and asexual lineages of this aphid are complicated by the difficulties in rapidly characterizing their breeding system. To facilitate this task and to gain insight into the genetic relatedness between sexual and asexual genotypes, molecular markers linked to breeding system differences were recently developed. In this study, we have successfully converted a random amplified polymorphic DNA (RAPD) marker associated with l…

0106 biological sciencesGenetic MarkersPopulationMolecular Sequence DataParthenogenesisRestriction MappingLocus (genetics)BiologyBreeding010603 evolutionary biology01 natural sciencesDNA MitochondrialAsexualityGene flow03 medical and health sciencesRhopalosiphum padiReproduction AsexualGeneticsAnimalsCloning MoleculareducationEcology Evolution Behavior and Systematics030304 developmental biology0303 health sciencesAphideducation.field_of_studyBase SequenceEcologyReproductionParthenogenesisSequence Analysis DNAbiology.organism_classificationRandom Amplified Polymorphic DNA TechniqueGenetics PopulationEvolutionary biologyGenetic markerAphidsEdible GrainMolecular ecology
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Genetic variation in natural populations of the aphid Rhopalosiphum padi as revealed by maternally inherited markers

1996

A survey on 148 clones of the aphid Rhopalosiphum padi from 11 widespread localities has been carried out to study the genetic structure of populations of this species as revealed by mitochondrial DNA restriction site and length polymorphisms as well as by restriction site analysis of a maternally inherited plasmid carried by the aphid eubacterial endosymbiont Buchnera aphidicola. Our results support the existence in the area under study of two main aphid maternal lineages strikingly coincidental with the two main reproductive categories displayed by this species. Those aphid clones possessing an incomplete life cycle that lacks the sexual phase (anholocyclic or androcyclic clones) show mit…

0106 biological sciencesGeneticseducation.field_of_studyAphidMitochondrial DNAPopulationHaplotypebiochemical phenomena metabolism and nutritionBiologybiology.organism_classificationGENETIQUE MITOCHONDRIALE010603 evolutionary biology01 natural sciencesINSECTE010602 entomologyRestriction siteRhopalosiphum padiGenetic variation[SDV.BBM] Life Sciences [q-bio]/Biochemistry Molecular BiologyGenetics[SDV.BBM]Life Sciences [q-bio]/Biochemistry Molecular BiologyBuchneraeducationComputingMilieux_MISCELLANEOUSEcology Evolution Behavior and SystematicsMolecular Ecology
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A morphological and mitochondrial assessment of Apis mellifera from Palermo, Italy

1998

A characterization of the honey bees from western Sicily (Palermo, Italy) is presented. Mor- phological comparisons to A. m. ligustica were made using data taken from honey bee populations from southeastern (Bari) and central (Emilia Romagna) Italy. The honey bees of the Palermo area have distinct morphological differences compared to the mainland honey bees. The mtDNA haplotype common in subspecies within the African lineage of A. mellifera predominated in the Sicilian honey bee samples (13 out of 16). These results suggest both the potential and the desirability to expend efforts to conserve A. m. sicula. © Inra/DIB/AGIB/Elsevier, Paris

0106 biological sciencesHymenoptera[SDV.BID]Life Sciences [q-bio]/BiodiversityBiologySubspecies010603 evolutionary biology01 natural sciencesApis mellifera sicula Apis mellifera ligustica morphology mitochondrial DNA Sicily Italy germoplasm consevation.[SDV.SA.SPA] Life Sciences [q-bio]/Agricultural sciences/Animal production studiesComputingMilieux_MISCELLANEOUS[SDV.EE]Life Sciences [q-bio]/Ecology environmentApidaeEcologyHoney beebiology.organism_classificationlanguage.human_languageApoidea[SDV.BA.ZI]Life Sciences [q-bio]/Animal biology/Invertebrate Zoology010602 entomology[SDV.EE] Life Sciences [q-bio]/Ecology environmentAculeataInsect Science[SDV.SA.SPA]Life Sciences [q-bio]/Agricultural sciences/Animal production studieslanguage[SDV.BA.ZI] Life Sciences [q-bio]/Animal biology/Invertebrate ZoologyTaxonomy (biology)Sicilian[SDV.BID] Life Sciences [q-bio]/Biodiversity
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Genetic homogeneity in the deep-sea grenadier Macrourus berglax across the North Atlantic Ocean

2018

Paucity of data on population structure and connectivity in deep sea species remains a major obstacle to their sustainable management and conservation in the face of ever increasing fisheries pressure and other forms of impacts on deep sea ecosystems. The roughhead grenadier Macrourus berglax presents all the classical characteristics of a deep sea species, such as slow growth and low fecundity, which make them particularly vulnerable to anthropogenic impact, due to their low resilience to change. In this study, the population structure of the roughhead grenadier is investigated throughout its geographic distribution using two sets of molecular markers: a partial sequence of the Control Reg…

0106 biological sciencesMacrourus berglaxbiologyEcology010604 marine biology & hydrobiologyBiogeographyPopulation structureAquatic ScienceOceanographybiology.organism_classificationFecundity010603 evolutionary biology01 natural sciencesDeep seaGene flowPhylogeographyGeographyEcosystemMicrosatellites; Mitochondrial DNA; Marine; Population structure; Fisheries
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Introgression of mitochondrial DNA among Myodes voles: consequences for energetics?

2011

Abstract Background Introgression of mitochondrial DNA (mtDNA) is among the most frequently described cases of reticulate evolution. The tendency of mtDNA to cross interspecific barriers is somewhat counter-intuitive considering the key function of enzymes that it encodes in the oxidative-phosphorylation process, which could give rise to hybrid dysfunction. How mtDNA reticulation affects the evolution of metabolic functions is, however, uncertain. Here we investigated how morpho-physiological traits vary in natural populations of a common rodent (the bank vole, Myodes glareolus) and whether this variation could be associated with mtDNA introgression. First, we confirmed that M. glareolus ha…

0106 biological sciencesMaleMitochondrial DNANuclear geneEvolutionIntrogression010603 evolutionary biology01 natural sciencesDNA Mitochondrial03 medical and health sciencesQH359-425AnimalsEcology Evolution Behavior and Systematics030304 developmental biologyGeneticsCell Nucleus0303 health sciencesbiologyCytochrome bArctic RegionsArvicolinaebiology.organism_classificationReticulate evolutionNuclear DNABank volePhenotypeArvicolinaeFemaleBasal MetabolismResearch ArticleBMC evolutionary biology
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Genomic Analysis of European Drosophila melanogaster Populations Reveals Longitudinal Structure, Continent-Wide Selection, and Previously Unknown DNA…

2020

Genetic variation is the fuel of evolution, with standing genetic variation especially important for short-term evolution and local adaptation. To date, studies of spatiotemporal patterns of genetic variation in natural populations have been challenging, as comprehensive sampling is logistically difficult, and sequencing of entire populations costly. Here, we address these issues using a collaborative approach, sequencing 48 pooled population samples from 32 locations, and perform the first continent-wide genomic analysis of genetic variation in European Drosophila melanogaster. Our analyses uncover longitudinal population structure, provide evidence for continent-wide selective sweeps, ide…

0106 biological sciencesMaleincipient sexual isolationQH301 BiologyAcclimatizationADNGenome Insect01 natural sciencesPopulation genomicsAdaptation; Clines; Demography; Population genomics; Selection; SNPs; Structural variants; Acclimatization; Altitude; Animals; DNA Viruses; Drosophila melanogaster; Europe; Genome Mitochondrial; Haplotypes; Insect Viruses; Male; Phylogeography; Polymorphism Single Nucleotide; Genome Insect; Genomic Structural Variation; Microbiota; Selection GeneticSDG 13 - Climate ActionComputingMilieux_MISCELLANEOUSeducation.field_of_study0303 health sciencesAltitude[SDV.BID.EVO]Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE]PE&RCgeneettinen muunteluPhylogeographyDrosophila melanogasterLaboratory of GeneticsTransposable elementnorth-americanmahlakärpäsetSettore BIO/18 - GENETICAselectionLaboratorium voor Erfelijkheidsleeramino-acid polymorphism03 medical and health sciencesGeneticGeneticsAdaptation demographyMicrobiomeAdaptationPolymorphismeducationDrosophilaMolecular BiologySelectionEcology Evolution Behavior and SystematicsDemography[SDV.GEN.GPO]Life Sciences [q-bio]/Genetics/Populations and Evolution [q-bio.PE]DNAchemistryEvolutionary biologyGenome MitochondrialGenomic Structural Variationinversion in(3r)payneAdaptationPopulation genomicsStructural variantsGenètica[SDV.EE.IEO]Life Sciences [q-bio]/Ecology environment/Symbiosisadaptation demographyCandidate genenucleotide polymorphismAcademicSubjects/SCI01180chemistry.chemical_compoundMelanogaster2. Zero hungerGenomebiologyMicrobiotaSingle NucleotideClinesclinesMitochondrialEuropepopulaatiogenetiikkatransposable elementsDrosophila melanogasterSNPsnatural-populationspopulation genomicsPopulationnext-generationDrosòfila melanogasterInsect Viruses010603 evolutionary biologyPolymorphism Single NucleotideQH301latitudinal clineGenetic variationAnimalsSelection GeneticSelection (genetic algorithm)DiscoveriesLocal adaptation030304 developmental biologylife-historyAcademicSubjects/SCI01130DNA Virusesstructural variantsDASbiology.organism_classificationHaplotypes13. Climate actionperimä[SDE.BE]Environmental Sciences/Biodiversity and EcologyInsectDNAMolecular Biology and Evolution
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Helminth communities of loggerhead turtles (Caretta caretta) from Central and Western Mediterranean Sea: the importance of host's ontogeny.

2009

We investigated the factors providing structure to the helminth communities of 182 loggerhead sea turtles, Caretta caretta, collected in 6 localities from Central and Western Mediterranean. Fifteen helminth taxa (10 digeneans, 4 nematodes and 1 acanthocephalan) were identified, of which 12 were specialist to marine turtles; very low numbers of immature individuals of 3 species typical from fish or cetaceans were also found. These observations confirm the hypothesis that phylogenetic factors restrict community composition to helminth species specific to marine turtles. There were significant community dissimilarities between turtles from different localities, the overall pattern being compat…

0106 biological sciencesMediterranean climateRange (biology)Molecular Sequence Data010603 evolutionary biology01 natural sciencesLoggerhead sea turtleDNA Mitochondrial030308 mycology & parasitologyPredationHost-Parasite Interactions03 medical and health sciencesMediterranean seaSpecies SpecificityHelminth communityHelminthsMediterranean SeaAnimals14. Life underwaterEcosystem0303 health sciencesCaretta carettabiologyEcologyStomachPelagic zoneSequence Analysis DNAbiology.organism_classificationAnisakisTurtlesIntestinesInfectious DiseasesHabitatLoggerhead sea turtleCyclooxygenase 2OntogenyParasitologySpecies richnessHelminthiasis AnimalParasitology international
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Sporadic nesting reveals long distance colonisation in the philopatric loggerhead sea turtle (Caretta caretta)

2018

The colonisation of new suitable habitats is crucial for species survival at evolutionary scale under changing environmental conditions. However, colonisation potential may be limited by philopatry that facilitates exploiting successful habitats across generations. We examine the mechanisms of long distance dispersal of the philopatric loggerhead sea turtle (Caretta caretta) by analysing 40 sporadic nesting events in the western Mediterranean. The analysis of a fragment of the mitochondrial DNA and 7 microsatellites of 121 samples from 18 of these nesting events revealed that these nests were colonising events associated with juveniles from distant populations feeding in nearby foraging gro…

0106 biological sciencesMediterranean climateScienceForagingPopulation DynamicsBiology010603 evolutionary biology01 natural sciencesLoggerhead sea turtleDNA MitochondrialArticleNesting BehaviorMediterranean SeaAnimalsAuthor CorrectionEcosystemTortugues marinesBiological modelsMultidisciplinaryEcology010604 marine biology & hydrobiologyPropagule pressureQRTemperatureSequence Analysis DNAModels biològicsbiology.organism_classificationBiological EvolutionMitochondriaTurtlesColonisationHabitatBiological dispersalMedicinePhilopatrySea turtlesMicrosatellite Repeats
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Assessing global range expansion in a cryptic species complex: insights from the red seaweed genus Asparagopsis (Florideophyceae)

2017

The mitochondrial genetic diversity, distribution and invasive potential of multiple cryptic operational taxonomic units (OTUs) of the red invasive seaweed Asparagopsis were assessed by studying introduced Mediterranean and Hawaiian populations. Invasive behavior of each Asparagopsis OTU was inferred from phylogeographic reconstructions, past historical demographic dynamics, recent range expansion assessments and future distributional predictions obtained from demographic models. Genealogical networks resolved Asparagopsis gametophytes and tetrasporophytes into four A. taxiformis and one A. armata cryptic OTUs. Falkenbergia isolates of A. taxiformis L3 were recovered for the first time in t…

0106 biological sciencesMediterranean climateSpecies complexfood.ingredientRange (biology)biological invasionsPopulationPlant SciencephylogeographyAquatic ScienceBiologyDNA Mitochondrial010603 evolutionary biology01 natural sciencesHawaiiDNA AlgalMediterranean seafoodEffective population sizeMediterranean SeaAsparagopsiseducationeducation.field_of_studyPlant DispersalEcology010604 marine biology & hydrobiologySequence Analysis DNAspecies distribution modellingSeaweedPhylogeographyPhylogeographymarine algaeRhodophytaIntroduced SpeciesJournal of Phycology
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