Search results for " molecule"

showing 10 items of 1523 documents

A modified ansatz for explicitly correlated coupled-cluster wave functions that is suitable for response theory

2009

A modified ansatz for explicitly correlated coupled-cluster wave functions with a single correlation factor is set forward. It is based on the fixed amplitude ansatz of Ten-no [Chem. Phys. Lett. 398, 56 (2004)] to which an extra term is added that allows for the explicitly correlated description of singly excited configurations. The new approach has been implemented for coupled-cluster singles and doubles with the aid of automated techniques. Numerical results are presented for vertical excitation energies, and ground and excited state equilibrium distances and harmonic frequencies of diatomics. The new approach is shown to provide a nearly unbiased description of ground and predominantly s…

AmplitudeCoupled clusterChemistryExcited stateQuantum mechanicsGeneral Physics and AstronomyPhysical and Theoretical ChemistryWave functionDiatomic moleculeExcitationTerm (time)AnsatzThe Journal of Chemical Physics
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Design and synthesis of new trehalose-conjugated pentapeptides as inhibitors of Aβ(1-42) fibrillogenesis and toxicity

2009

Aggregation of the amyloid A? peptide and its accumulation into insoluble deposits (plaques) are believed to be the main cause of neuronal dysfunction associated with Alzheimer's disease (AD); small molecules that can interfere with the A? amyloid fibril formation are therefore of interest for a potential therapeutic strategy. Three new trehalose-conjugated peptides of the well known ?-sheet breaker peptide iA?5p,were synthesized. The disaccharide was covalently attached to different sites of the LPFFD peptide chain, i.e. at the N-terminus, C-terminus or at the Asp side chain. CD spectroscopy in different solvents was used to assess changes in the peptide conformation of these compounds. Th…

AmyloidCell SurvivalPeptideMicroscopy Atomic ForceBiochemistryMass Spectrometrychemistry.chemical_compoundbeta-sheet breaker peptideStructural BiologySFMmental disordersDrug DiscoveryAnimalsbeta-sheet breaker peptidesMolecular BiologyCells CulturedChromatography High Pressure LiquidtrehaloseCerebral CortexPharmacologychemistry.chemical_classificationthioflavin Tbeta-amyloidOrganic ChemistryP3 peptideFibrillogenesisGeneral MedicineTrehaloseSmall moleculeGlycopeptideNeuronal culturesRatsPeptide Conformationneuronal cultureBiochemistrychemistryMolecular MedicineAmyloid-betaPeptidesJournal of Peptide Science
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Tips on ligand immobilization and kinetic study using surface plasmon resonance.

2016

Surface plasmon resonance (SPR) technique offers a robust label-free approach applicable in various investigations including binding affinity, specificity and kinetics of biological macromolecules (e.g., peptides, proteins and nucleotidase) and small molecules. SPR provides extremely important data on the kinetics and affinity of substances examined, through which bio-specific interaction(s) can be established by the analysis of adsorption of analyte onto the immobilized ligand(s) on a sensor-based analytical system. Due to SPR wide applications in biomedical laboratories, the aim of this editorial is to highlight the importance of SPR in affinity kinetics and ligand immobilization.

AnalyteStereochemistryKineticseducationPharmaceutical Science02 engineering and technology01 natural sciencesGeneral Biochemistry Genetics and Molecular BiologyAnalyteAdsorptionNucleotidaseSurface plasmon resonanceSurface plasmon resonancelcsh:QH301-705.5Ligand immobilizationlcsh:R5-920Chemistry010401 analytical chemistryGeneral Medicine021001 nanoscience & nanotechnologyLigand (biochemistry)Small moleculeCombinatorial chemistry0104 chemical sciencesKinetic studyEditoriallcsh:Biology (General)0210 nano-technologylcsh:Medicine (General)MacromoleculeBioImpacts : BI
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Expression of proteolitic enzymes in induced angiogenesis

2008

Angiogenesis (growth of new blood vessels) plays a key role in tissue repair, such as in cancer progression (Folkman 1995. New Engl. J. Med. 333, 1757-63). At the beginning of the process is observed the matrix degradation and endothelial cells (ECs) migration inside to the connective tissue in proximity of vessel walls. During angiogenesis several modifications occurs at plasma membrane level; a redistribution of cell-cell and cell-matrix adhesion molecules (Bazzoni et al 1999), such as an increased expression of several proteolytic enzymes, including MMPs and serine proteases, as plasminogen activators and SIMPs, were observed (Ghersi et al. 2006. Cancer Res. 66, 4652-61; Ghersi 2008 Fron…

AngiogenesiAdhesion moleculeEpithelial/mesenchimal transictionSettore BIO/10 - BiochimicaCadherinProteolytic enzyme
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Rapid vascularization of starchâ poly(caprolactone) in vivo by outgrowth endothelial cells in co-culture with primary osteoblasts

2011

The successful integration of in vitro-generated tissues is dependent on adequate vascularization in vivo. Human outgrowth endothelial cells (OECs) isolated from the mononuclear cell fraction of peripheral blood represent a potent population of circulating endothelial progenitors that could provide a cell source for rapid anastomosis and scaffold vascularization. Our previous work with these cells in co-culture with primary human osteoblasts has demonstrated their potential to form perfused vascular structures within a starch–poly(caprolactone) biomaterial in vivo. In the present study, we demonstrate the ability of OECs to form perfused vascular structures as early as 48 h following subcut…

AngiogenesisPolyestersPopulationBiomedical EngineeringNeovascularization PhysiologicMedicine (miscellaneous)02 engineering and technologyBiologyBiomaterialsNeovascularization03 medical and health sciencesTissue engineeringIn vivoIn vivomedicineHumansVimentinProgenitor celleducationCells CulturedCell Proliferation030304 developmental biologyPericyte0303 health scienceseducation.field_of_studyOsteoblastsScience & TechnologyOsteoblastEndothelial CellsOutgrowth endothelial cellStarchOsteoblast021001 nanoscience & nanotechnologyImmunohistochemistryCoculture Techniques3. Good healthCell biologyPlatelet Endothelial Cell Adhesion Molecule-1medicine.anatomical_structureBlood VesselsPericyteAngiogenesismedicine.symptomCo-culture0210 nano-technologyBiomedical engineering
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Inhibition of tumor angiogenesis by antibodies, synthetic small molecules and natural products.

2011

Cancer remains one of the major causes of death worldwide. The switch to pathological angiogenesis is a key process in the promotion of cancer and consequently provides several new and promising targets to anticancer therapy. Thus, antagonizing angiogenesis cuts off the tumor's oxygen and nutrition supply. This review focuses on angiogenesis inhibitors as option for cancer treatment. Modes of action, adverse effects, mechanisms of resistance as well as new developments are highlighted. One approach in angiogenesis inhibition is intermitting the further VEGF (vascular endothelial growth factor) signal pathway with monoclonal antibodies. Bevacizumab is a highly specific recombinant humanized …

Angiogenesismedicine.drug_classGenisteinAngiogenesis InhibitorsAntineoplastic AgentsBiologyPharmacologyMonoclonal antibodyBiochemistryReceptor tyrosine kinaseNeovascularizationSmall Molecule Librarieschemistry.chemical_compoundGrowth factor receptorNeoplasmsDrug DiscoverymedicineAnimalsHumansPharmacologyBiological ProductsNeovascularization PathologicVascular Endothelial Growth FactorsOrganic ChemistryCancerAntibodies Monoclonalmedicine.diseaseAntineoplastic Agents PhytogenicVascular endothelial growth factorchemistrybiology.proteinMolecular Medicinemedicine.symptomCurrent medicinal chemistry
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Angiotensin II Induces Leukocyte–Endothelial Cell Interactions In Vivo Via AT1 and AT2 Receptor–Mediated P-Selectin Upregulation

2000

Background—Angiotensin II (Ang II) plays a critical role in the development of vascular lesions in hypertension, atherosclerosis, and several renal diseases. Because Ang II may contribute to the leukocyte recruitment associated with these pathological states, the aim of the present study was to assess the role of Ang II in leukocyte–endothelial cell interactions in vivo. Methods and Results—Intravital microscopy of the rat mesenteric postcapillary venules was used. Sixty minutes of superfusion with 1 nmol/L Ang II induced a significant increase in leukocyte rolling flux (83.8±20.7 versus 16.4±3.1 cells/min), adhesion (11.4±1.0 versus 0.8±0.5 cells/100 µm), and emigration (4.0±0.7 versus 0.2…

AngiotensinCell adhesion molecules:CIENCIAS MÉDICAS ::Medicina interna [UNESCO]Angiotensin ; Endothelium ; Leukocytes ; Cell adhesion molecules ; GlycoproteinsUNESCO::CIENCIAS MÉDICASLeukocytesEndothelium:CIENCIAS MÉDICAS [UNESCO]UNESCO::CIENCIAS MÉDICAS ::Medicina internaGlycoproteins
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Ab initio quasi-relativistic calculations on angular momentum and magnetic couplings of molecular electronic states.

2002

Abstract We formulate an ab initio method of quasirelativistic calculations on angular momentum and magnetic transition matrix elements between adiabatic electronic states of molecules. Our approach is based on the construction of a state-selective effective Hamiltonian and transition density matrices by means of the multireference many-body perturbation theory. Pilot applications to the evaluation of B 0 + u → B ″1 u predissociation matrix elements in I 2 and interactions in the B 0 + u ∼ B 1 u complex of Te 2 are reported.

Angular momentumChemistryAb initioGeneral Physics and AstronomyElectronic structureDiatomic moleculesymbols.namesakeMatrix (mathematics)Ab initio quantum chemistry methodssymbolsPhysical and Theoretical ChemistryAtomic physicsHamiltonian (quantum mechanics)Adiabatic process
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N-Heterocyclic Carbene Catalyzed Asymmetric Synthesis of Dihydropyranothiazoles­ via Azolium Enolate Intermediates

2017

A highly diastereo- and enantiostereoselective synthesis of bicyclic dihydropyranothiazoles combining a thiazole and δ-lactone skeleton via NHC-catalyzed [4+2] annulation of 5-alkenylthiazolones and α-chloroaldehydes has been developed. The heterocyclic products are formed via azolium enolate intermediates in good yields with high diastereo- and enantistereoselectivities.

AnnulationBicyclic molecule010405 organic chemistryStereochemistryOrganic ChemistryEnantioselective synthesis010402 general chemistry01 natural sciencesCatalysis0104 chemical sciencesCatalysischemistry.chemical_compoundchemistryOrganocatalysisThiazoleCarbeneSynthesis
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Biomimetic diels–alder cyclizations for the construction of the brevianamide, paraherquamide, sclerotamide, asperparaline and VM55599 ring systems

1998

Abstract A potentially bio-mimetic Diels–Alder cyclization to construct the bicyclo[2.2.2] ring system common to the paraherquamides, marcfortines, sclerotamides, brevianamides, VM55599, and asperparaline is reported. Epi-deoxybrevianamide E (22) is converted into the corresponding lactim ether (23) and then oxidized with DDQ to provide an azadiene (24) which is tautomerized in the presence of base to azadiene 25 which, spontaneously cyclizes to give a 2:1 mixture of cycloadducts 26 and 27. These cycloadducts are each in turn, converted into d , l -C-19-epi-brevianamide A (20) and d , l -brevianamide B (6). The stereochemical implications of the [4+2] cycloaddition is discussed in the conte…

AnthelminticsBicyclic moleculeStereochemistryOrganic ChemistryClinical BiochemistryIndolizinesPharmaceutical ScienceStereoisomerismEtherContext (language use)Ring (chemistry)BiochemistryPiperazinesCycloadditionTurn (biochemistry)chemistry.chemical_compoundAlkaloidschemistryCyclizationDrug DiscoveryMolecular MedicineParaherquamideSpiro CompoundsBrevianamideMolecular BiologyBioorganic & Medicinal Chemistry
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