Search results for " pattern"

showing 10 items of 2245 documents

Temperate Fish Detection and Classification: a Deep Learning based Approach

2021

A wide range of applications in marine ecology extensively uses underwater cameras. Still, to efficiently process the vast amount of data generated, we need to develop tools that can automatically detect and recognize species captured on film. Classifying fish species from videos and images in natural environments can be challenging because of noise and variation in illumination and the surrounding habitat. In this paper, we propose a two-step deep learning approach for the detection and classification of temperate fishes without pre-filtering. The first step is to detect each single fish in an image, independent of species and sex. For this purpose, we employ the You Only Look Once (YOLO) …

0106 biological sciencesFOS: Computer and information sciencesComputer Science - Machine LearningComputer scienceComputer Vision and Pattern Recognition (cs.CV)Computer Science - Computer Vision and Pattern Recognition010603 evolutionary biology01 natural sciencesConvolutional neural networkVDP::Matematikk og Naturvitenskap: 400::Informasjons- og kommunikasjonsvitenskap: 420Machine Learning (cs.LG)Artificial IntelligenceClassifier (linguistics)FOS: Electrical engineering electronic engineering information engineeringbusiness.industry010604 marine biology & hydrobiologyDeep learningImage and Video Processing (eess.IV)Process (computing)Pattern recognitionElectrical Engineering and Systems Science - Image and Video ProcessingObject detectionA priori and a posterioriNoise (video)Artificial intelligenceTransfer of learningbusiness
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Why ruminating ungulates chew sloppily: Biomechanics discern a phylogenetic pattern.

2019

Altres ajuts: "Beatriu de Pinos" 2014 - BP-A 00048 There is considerable debate regarding whether mandibular morphology in ungulates primarily reflects phylogenetic affinities or adaptation to specific diet. In an effort to help resolve this debate, we use three-dimensional finite element analysis (FEA) to assess the biomechanical performance of mandibles in eleven ungulate taxa with well-established but distinct dietary preferences. We found notable differences in the magnitude and the distribution of von Mises stress between Artiodactyla and Perissodactyla, with the latter displaying lower overall stress values. Additionally, within the order Artiodactyla the suborders Ruminantia and Tylo…

0106 biological sciencesMaleModels AnatomicUngulateScienceFinite Element AnalysisZoologyRhinocerosMandible010603 evolutionary biology01 natural sciencesbiomechanicsRuminantiaBite ForceEvolution Molecular03 medical and health sciencesImaging Three-DimensionalSpecies SpecificityAnimalsCluster AnalysisRuminatingFEAPerissodactylaPhylogeny030304 developmental biologyArtiodactylafunctional morphology0303 health sciencesMultidisciplinarybiologyQRReproducibility of ResultsRuminantsbiology.organism_classificationTylopodaBiomechanical PhenomenaDietBite force quotientPhylogenetic PatternMedicineMasticationFemaleAdaptationPloS one
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Phenotypic variation across populations of red mullet (Mullus barbatus) in different environments of the central Mediterranean

2020

Geometric morphometrics is an effective tool for quantifying intraspecific variations in fish body shape and differentiating populations and fisheries stocks. This study used geometric morphometrics to examine patterns of intraspecific morphological differentiation among four red mullet (Mullus barbatus) populations in the Strait of Sicily in the central Mediterranean Sea. We hypothesised that morphological differences among local populations were caused by the diverse hydrodynamic features characterising the sampled areas and maintained by geographical isolation. We also examined whether body shape homogeneity or variability within local populations was related to seabed rugosity as an in…

0106 biological sciencesMediterranean climateMullus barbatusMorphometricsRugosityRed mulletEcologyEcology010604 marine biology & hydrobiologykinetic energyAquatic ScienceBiologyhabitat complexityOceanographybiology.organism_classification010603 evolutionary biology01 natural sciencesIntraspecific competitionStrait of SicilyMediterranean seaHabitatmorphospace patterninggeometric morphometricsEcology Evolution Behavior and Systematics
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Effects of marine noise pollution on Mediterranean fishes and invertebrates: A review.

2020

International audience; Marine noise pollution (MNP) can cause a multitude of impacts on many organisms, but information is often scattered and general outcomes difficult to assess. We have reviewed the literature on MNP impacts on Mediterranean fish and invertebrates. Both chronic and acute MNP produced by various human activities - e.g. maritime traffic, pile driving, air guns - were found to cause detectable effects on intra-specific communication, vital processes, physiology, behavioral patterns, health status and survival. These effects on individuals can extend to inducing population- and ecosystem-wide alterations, especially when MNP impacts functionally important species, such as k…

0106 biological sciencesMediterranean climatePopulation010501 environmental sciencesAquatic SciencePopulation and ecosystem impacts[SDU.STU.OC] Sciences of the Universe [physics]/Earth Sciences/OceanographyOceanography01 natural sciencesBehavioral alterationsMediterranean sea[SDV.EE.ECO]Life Sciences [q-bio]/Ecology environment/EcosystemsSustainable development[SDV.EE.ECO] Life Sciences [q-bio]/Ecology environment/EcosystemsMediterranean SeaAnimalsHumans14. Life underwatereducationMarine noise pollutionEnvironmental planning[SDU.STU.OC]Sciences of the Universe [physics]/Earth Sciences/OceanographyEcosystem0105 earth and related environmental sciencesInvertebrateSustainable developmenteducation.field_of_studyNoise pollution010604 marine biology & hydrobiologyFishesBehavioral patternBehavioral alterations Marine noise pollution Population and ecosystem impacts Stress responses Sustainable development Animals Fishes Humans Invertebrates Mediterranean Sea Ecosystem NoiseStress responsesPollutionInvertebrates[SDE.BE] Environmental Sciences/Biodiversity and EcologyGeographyHabitat13. Climate action[SDE.BE]Environmental Sciences/Biodiversity and EcologyNoiseMarine pollution bulletin
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Bayesian spatio-temporal approach to identifying fish nurseries by validating persistence areas

2015

Spatial and temporal closures of fish nursery areas to fishing have recently been recognized as useful tools for efficient fisheries management, as they preserve the reproductive potential of populations and increase the recruitment of target species. In order to identify and locate potential nursery areas for spatio-temporal closures, a solid understanding of species− environment relationships is needed, as well as spatial identification of fish nurseries through the application of robust analyses. One way to achieve knowledge of fish nurseries is to analyse the persistence of recruitment hotspots. In this study, we propose the comparison of different spatiotemporal model structures to ass…

0106 biological sciencesMediterranean climatehttp://aims.fao.org/aos/agrovoc/c_28840[SDV]Life Sciences [q-bio]01 natural sciencesMediterranean seaAbundance (ecology)Ecosystem approachEcologybiologyEcologyU10 - Informatique mathématiques et statistiquesinteraction élevage environnementmodèle de distributionMerluccius merlucciushttp://aims.fao.org/aos/agrovoc/c_41529zone de pêcheNursery areasSpatio temporal analysisanalyse bayésienneGeographyGestion des pêchesgestion spatialealevinageFisheries managementFishinganalyse spatiotemporellegestion des ressources naturellesAquatic Science010603 evolutionary biologyhttp://aims.fao.org/aos/agrovoc/c_24026étude comparativeHakeMerluccius merluccius14. Life underwaterhttp://aims.fao.org/aos/agrovoc/c_4699Ecology Evolution Behavior and Systematicshttp://aims.fao.org/aos/agrovoc/c_12399Distribution patternapproche ecosystémiqueÉcologie marinehttp://aims.fao.org/aos/agrovoc/c_4609010604 marine biology & hydrobiologybiology.organism_classificationBiologie marineFisheryThéorie bayésiennehttp://aims.fao.org/aos/agrovoc/c_9000115M40 - Écologie aquatiqueBayesian hierarchical modellingMarine protected areaSpatial fisheries managementNursery areas;Distribution pattern;Ecosystem approach;Spatial fisheries management;Spatio temporal analysis;Bayesian hierarchical modelling;Merluccius merluccius
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Going underground: short- and long-term movements may reveal the fossorial spatial ecology of an amphisbaenian

2021

[Background]: The movement and spatial ecology of an animal depends on its morphological and functional adaptations to its environment. In fossorial animals, adaptations to the underground life help to face peculiar ecological challenges, very different from those of epigeal species, but may constrain their movement ability.

0106 biological sciencesMovement patternsEcology (disciplines)010603 evolutionary biology01 natural sciencesAmphisbaenians03 medical and health sciencesSpace useTrogonophis wiegmannilcsh:QH301-705.5PIT tag telemetryEcology Evolution Behavior and Systematics030304 developmental biology0303 health sciencesMovement (music)EcologyResearchSpace useFossorialTerm (time)Geographylcsh:Biology (General)Animal ecologyFossorial reptilesSpatial ecologyEpigeal
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Sampling effort and information quality provided by rare and common species in estimating assemblage structure

2020

Made available in DSpace on 2020-12-12T01:06:11Z (GMT). No. of bitstreams: 0 Previous issue date: 2020-03-01 Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES) Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP) Academy of Finland Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq) Reliable biological assessments are essential to answer ecological and management questions but require well-designed studies and representative sample sizes. However, large sampling effort is rarely possible, because it demands large financial resources and time, restricting the number of sites sampled, the duration of the study and the sampling effort at each site. In…

0106 biological sciencesMultivariate statisticsRare speciesDIVERSITYGeneral Decision SciencesSUFFICIENTContext (language use)MACROINVERTEBRATE010501 environmental sciences010603 evolutionary biology01 natural sciencesProcrustesCommon speciesAbundance (ecology)EXCLUSIONStatisticsCommunity ecologyEcology Evolution Behavior and SystematicsMinimal sampling effort0105 earth and related environmental sciencesMathematicsEcologyStream insectsSampling (statistics)15. Life on landENVIRONMENTAL HETEROGENEITYCOMMUNITYBiological diversitySTREAM1181 Ecology evolutionary biologyBIODIVERSITYABUNDANCEOrdinationProcrustes analysisRICHNESS PATTERNSEcological Indicators
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Seasonally specific responses to wind patterns and ocean productivity facilitate the longest animal migration on Earth

2020

Migratory strategies of animals are broadly defined by species’ eco-evolutionary dynamics, while behavioural plasticity according to the immediate environmental conditions en route is crucial for energy efficiency and survival. The Arctic tern Sterna paradisaea is known for its remarkable migration capacity, as it performs the longest migration known by any animal. Yet, little is known about the ecology of this record-breaking journey. Here, we tested how individual migration strategies of Arctic terns are adapted to wind conditions and fuelling opportunities along the way. To this end, we deployed geolocators on adult birds at their breeding sites in Svalbard, Norway. Our results confirm f…

0106 biological sciencesOceanographyEcologyGlobal wind patterns010604 marine biology & hydrobiologyEnvironmental scienceEarth (chemistry)Aquatic Science010603 evolutionary biology01 natural sciencesProductivityEcology Evolution Behavior and SystematicsMarine Ecology Progress Series
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First evidence of underwater sounds emitted by the living fossils Lepidurus lubbocki and Triops cancriformis (Branchiopoda: Notostraca)

2021

Sound is the most effective means of communication in marine and freshwater ecosystems. However, no data about acoustic emissions from non-malacostracan crustaceans are currently available, so their ability to produce sounds is unknown. For the first time, this study investigated the sound produced by 2 tadpole shrimp species,Triops cancriformisandLepidurus lubbocki.L. lubbockiindividuals were collected from a natural temporary pond in Sicily (Italy), whereasT. cancriformisindividuals were obtained from eggs contained in sediment from a rock pool in Sardinia (Italy). In the laboratory, experimental tanks with the animals (one species at a time) were acoustically monitored. Both species prod…

0106 biological sciencesPassive acoustic monitoringQH301-705.5Settore BIO/05 - ZoologiaBranchiopodaZoologyPassive acoustic monitoringAquatic ScienceOceanography010603 evolutionary biology01 natural sciencesMicrobiologyNotostracaBiology (General)Ecology Evolution Behavior and SystematicsLepidurusSoundsEcologybiology010604 marine biology & hydrobiologyNotostracabiology.organism_classificationTemporal patternQR1-502Triops cancriformisLiving fossilAquatic Biology
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The grapevine flagellin receptor VvFLS2 differentially recognizes flagellin-derived epitopes from the endophytic growth-promoting bacterium Burkholde…

2014

International audience; The role of flagellin perception in the context of plant beneficial bacteria still remains unclear. Here, we characterized the flagellin sensing system flg22-FLAGELLIN SENSING 2 (FLS2) in grapevine, and analyzed the flagellin perception in the interaction with the endophytic plant growth-promoting rhizobacterium (PGPR) Burkholderia phytofirmans. The functionality of the grapevine FLS2 receptor, VvFLS2, was demonstrated by complementation assays in the Arabidopsis thaliana fls2 mutant, which restored flg22-induced H2O2 production and growth inhibition. Using synthetic flg22 peptides from different bacterial origins, we compared recognition specificities between VvFLS2…

0106 biological sciencesPhysiologyBurkholderia phytofirmans[SDV]Life Sciences [q-bio]flg22ArabidopsisColony Count MicrobialPlant Sciencemedicine.disease_cause01 natural sciencesEpitopesArabidopsisEndophytesArabidopsis thalianaPlant ImmunityVitisDisease ResistancePlant Proteins0303 health sciencesbiologyBurkholderia phytofirmansmicrobe-associated molecular pattern (MAMP)Xanthomonas campestrisPGPR[SDE]Environmental SciencesBotrytispattern recognition receptor (PRR)BurkholderiaMolecular Sequence DataContext (language use)Receptors Cell SurfaceMicrobiology03 medical and health sciencesSpecies Specificitymedicine[SDV.BV]Life Sciences [q-bio]/Vegetal BiologyComputer SimulationAmino Acid Sequenceflagellin sensing030304 developmental biologyPlant DiseasesfungiCell MembraneGenetic Complementation TestPathogenic bacteriabiology.organism_classificationVitis viniferaMutationbiology.proteinReactive Oxygen SpeciesFlagellinBacteria010606 plant biology & botanyFlagellinThe New phytologistReferences
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