Search results for " phenome"

showing 10 items of 11891 documents

Distribution of sea urchins living near shallow water CO2 vents is dependent upon species acid-base and ion-regulatory abilities.

2013

To reduce the negative effect of climate change on Biodiversity, the use of geological CO2 sequestration has been proposed; however leakage from underwater storages may represent a risk to marine life. As extracellular homeostasis is important in determining species' ability to cope with elevated CO2, we investigated the acid-base and ion regulatory responses, as well as the density, of sea urchins living around CO2 vents at Vulcano, Italy. We conducted in situ transplantation and field-based laboratory exposures to different pCO2/pH regimes. Our results confirm that sea urchins have some ability to regulate their extracellular fluid under elevated pCO2. Furthermore, we show that even in cl…

0106 biological sciencesSettore BIO/07 - EcologiaGeological Phenomena010504 meteorology & atmospheric sciencesClimate ChangeSpecies distributionBiodiversityMarine lifeAquatic ScienceOceanography01 natural sciencesParacentrotus lividushowever leakage from underwater storages may represent a risk to marine life. As extracellular homeostasis is important in determining species' ability to cope with elevated CO2 we investigated the acid-base and ion regulatory responses as well as the density of sea urchins living around CO2 vents at Vulcano Italy. We conducted in situ transplantation and field-based laboratory exposures to different pCO2/pH regimes. Our results confirm that sea urchins have some ability to regulate their extracellular fluid under elevated pCO2. Furthermore we show that even in closely-related taxa divergent physiological capabilities underlie differences in taxa distribution around the CO2 vent. It is concluded that species distribution under the sort of elevated CO2 conditions occurring with leakages from geological storages and future ocean acidification scenarios may partly be determined by quite subtle physiological differentiation.Mediterranean seaBenthosAnimalsSeawater14. Life underwaterEcosystem0105 earth and related environmental sciencesbiologyEcology010604 marine biology & hydrobiologyTo reduce the negative effect of climate change on Biodiversity the use of geological CO2 sequestration has been proposedOcean acidificationCarbon DioxideHydrogen-Ion Concentrationbiology.organism_classificationAdaptation PhysiologicalPollutionTransplantationOceanographyItaly13. Climate actionSea UrchinsWater Pollutants Chemical
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Seed Bank in Annuals: Competition Between Banker and Non-banker Morphs

2002

Seed bank is a plant life history strategy against the unpredictability of the biotic and the abiotic environment. We simulated competition between a seed banking and a non-banking morph of an annual plant. A constant fraction of the banker morph seeds was allocated to the seed bank, where they had a constant mortality and germination rate. All surviving seeds of the non-banker morph germinated in the next generation. The seedlings of both morphs experienced similar density-dependent mortality. Whether one of the morphs wins or the morphs coexist was evaluated from parameter space plots and statistically with logistic regression analysis. All parameters of the model had a significant, nonli…

0106 biological sciencesStatistics and Probabilitygenetic structuresmedia_common.quotation_subjectComputingMethodologies_IMAGEPROCESSINGANDCOMPUTERVISIONGerminationModel parametersBiologyModels Biological010603 evolutionary biology01 natural sciencesGeneralLiterature_MISCELLANEOUSGeneral Biochemistry Genetics and Molecular BiologyPlant lifeCompetition (biology)BotanyEcosystemBiological sciencesEcosystemreproductive and urinary physiologyComputingMethodologies_COMPUTERGRAPHICSmedia_commonAbiotic componentGeneral Immunology and MicrobiologyReproductionApplied MathematicsfungiGeneral Medicine15. Life on landhumanitiesLogistic ModelsAgronomyGerminationModeling and SimulationSeedsAnnual plantGeneral Agricultural and Biological Sciencespsychological phenomena and processes010606 plant biology & botanyJournal of Theoretical Biology
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Genome sequence of the pea aphid Acyrthosiphon pisum

2010

The genome of the pea aphid shows remarkable levels of gene duplication and equally remarkable gene absences that shed light on aspects of aphid biology, most especially its symbiosis with Buchnera.

0106 biological sciencesTANDEM REPEATSGenome InsectGene TransferRRES175Sequència genòmicaFaculty of Science\Computer ScienceCPG METHYLATION01 natural sciencesGenomeMedical and Health SciencesInternational Aphid Genomics ConsortiumBiologiska vetenskaperBiology (General)GENE-EXPRESSION2. Zero hungerGenetics0303 health sciencesAphidGenomeAfídidsGeneral NeuroscienceGENOME SEQUENCEfood and beveragesDROSOPHILA CIRCADIAN CLOCKBiological SciencesGenetics and Genomics/Microbial Evolution and GenomicsINSECTEGenètica microbianapuceronAPIS-MELLIFERAGeneral Agricultural and Biological SciencesInfectionsymbioseBiotechnologyResearch ArticleVIRUS VECTORING175_GeneticsSYMBIOTIC BACTERIAGene Transfer HorizontalQH301-705.5ACYRTHOSIPHON PISUMBiologyHOLOMETABOLOUS INSECTSHOST-PLANT010603 evolutionary biologyGENOME SEQUENCE;PEA APHID;ACYRTHOSIPHON PISUM;INSECT-PLANT;HOST-PLANT;VIRUS VECTORING;PHENOTYPIC PLASTICITY;HOLOMETABOLOUS INSECTS;INSECTE;RAVAGEUR DES CULTURES; SOCIAL INSECTGeneral Biochemistry Genetics and Molecular BiologyHorizontal03 medical and health sciencesBuchneraPHENOTYPIC PLASTICITYINSECT-PLANTGeneticsGene familyLife ScienceAnimalsSymbiosisGene030304 developmental biologyWhole genome sequencingGeneral Immunology and MicrobiologyAnnotation; Aphid; Genome sequenceAgricultural and Veterinary Sciences175_EntomologyGenètica animalBacteriocytegénomegèneHuman GenomePEA APHIDBiology and Life Sciences15. Life on landbiochemical phenomena metabolism and nutritionbiology.organism_classificationREPETITIVE ELEMENTSDNA-SEQUENCESAcyrthosiphon pisumGenome SequenceGenetics and Genomics/Genome ProjectsRAVAGEUR DES CULTURESAphidsPHEROMONE-BINDINGBuchneraInsectDevelopmental Biology[SDV.EE.IEO]Life Sciences [q-bio]/Ecology environment/Symbiosis
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Biological films adhering to the oral soft tissues: Structure, composition, and potential impact on taste perception

2018

The role of free-flowing saliva in taste perception is increasingly recognized, but saliva is also present in the mouth as films intimately associated to soft or hard tissues. On mucosal surfaces, particularly on the tongue, the structure and composition of such films (including its microbial constitutive part) may play a particular role in the sense of taste due to their proximity with the taste anatomical structures. This review compiles the current knowledge on the structure of biological films adhering to oral mucosae and on their biochemical and microbiological composition, before presenting possible implications for taste perception. PRACTICAL APPLICATIONS: The understanding of the ro…

0106 biological sciencesTastemedia_common.quotation_subjectAnatomical structuresPharmaceutical ScienceBacterial Physiological Phenomena01 natural sciencestasteOral soft tissues0404 agricultural biotechnologytongueTongue010608 biotechnologyPerceptionmicrobiotamedicineHumansComposition (language)media_commonMouthsalivaPotential impactCommunicationBacteriabusiness.industryMouth MucosaTaste PerceptionEpithelial Cells04 agricultural and veterinary sciencesTaste Buds040401 food sciencemedicine.anatomical_structuremucosal pellicleBiofilmsPsychologybusiness[SDV.AEN]Life Sciences [q-bio]/Food and NutritionFood ScienceJournal of Texture Studies
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The effect of maze complexity on maze-solving time in a desert ant

2019

One neglected aspect of research on foraging behavior is that of the effect of obstacles that increase habitat complexity on foraging efficiency. Here, we explored how long it takes individually foraging desert ant workers (Cataglyphis niger) to reach a food reward in a maze, and examined whether maze complexity affects maze-solving time (the time elapsed till the first worker reached the food reward). The test mazes differed in their complexity level, or the relative number of correct paths leading to the food reward, vs. wrong paths leading to dead-ends. Maze-solving time steeply increased with maze complexity, but was unaffected by colony size, despite the positive correlation between co…

0106 biological sciencesTime FactorsForagingPositive correlation010603 evolutionary biology01 natural sciencesBehavioral NeuroscienceRandom searchRewardStatisticsAnimals0501 psychology and cognitive sciences050102 behavioral science & comparative psychologyMaze LearningMathematicsbiologyAnts05 social sciencesFeeding BehaviorGeneral Medicinebiology.organism_classificationFoodCataglyphisExploratory BehaviorAnimal Science and ZoologyCataglyphis nigerpsychological phenomena and processesBehavioural Processes
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Cytosolic calcium rises and related events in ergosterol-treated Nicotiana cells

2011

International audience; The typical fungal membrane component ergosterol was previously shown to trigger defence responses and protect plants against pathogens. Most of the elicitors mobilize the second messenger calcium, to trigger plant defences. We checked the involvement of calcium in response to ergosterol using Nicotiana plumbaginifolia and Nicotiana tabacum cv Xanthi cells expressing apoaequorin in the cytosol. First, it was verified if ergosterol was efficient in these cells inducing modifications of proton fluxes and increased expression of defence-related genes. Then, it was shown that ergosterol induced a rapid and transient biphasic increase of free [Ca2þ]cyt which intensity dep…

0106 biological sciencesTime FactorsPhysiologyNicotiana tabacumPlant SciencesterolsSecond Messenger Systemstobacco01 natural scienceschemistry.chemical_compoundCytosolpolycyclic compoundsPhosphorylationCalcium signalingreactive oxygen species0303 health sciencesErgosterolelicitorbiologyergosterolHydrogen-Ion ConcentrationPlants Genetically ModifiedRecombinant ProteinsCell biologyBiochemistrySecond messenger systemReactive oxygen species; Calcium signature; Elicitor; Signal transduction; MAPKs; tobaccolipids (amino acids peptides and proteins)Protonssignal transductionCell Survivalnicotiana plumbaginifoliachemistry.chemical_elementnicotiana tabacumoxydantCalciumcalcium signature03 medical and health sciencesAequorinMAPKsBAPTAGenetics[SDV.BBM]Life Sciences [q-bio]/Biochemistry Molecular BiologyCalcium Signaling030304 developmental biologyMitogen-Activated Protein Kinase KinasesCalcium metabolismHydrogen Peroxidebiochemical phenomena metabolism and nutritionbiology.organism_classificationCytosolchemistryCalciumApoproteins010606 plant biology & botany
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Immunity and Virulence in Bird-Parasite Interactions.

2010

8 pages; International audience; The interaction between hosts and parasites is characterized by the evolution of reciproca adaptations aiming at reducing the cost of infection (from the host point of view) and to optimize host exploitation (from the parasite point of view). Within this co-evolutionary scenario, the immune system takes a central role. The immune system has evolved to fight off parasitic attacks. However, immune defences cannot be deployed without costs which set a limit to the protective effect of immunity. Moreover, immune defences impose strong selection pressures on the parasite and can favour the evolution of more virulent pathogen strains. In this article, we will disc…

0106 biological sciences[ SDV.MP.PAR ] Life Sciences [q-bio]/Microbiology and Parasitology/ParasitologyVirulenceBiology[ SDV.IMM.IA ] Life Sciences [q-bio]/Immunology/Adaptive immunology010603 evolutionary biology01 natural sciencesimmune response03 medical and health sciencesImmune systemImmunityImmunopathology[ SDV.EE.IEO ] Life Sciences [q-bio]/Ecology environment/SymbiosisParasite hostingimmunopathology[SDV.MP.PAR]Life Sciences [q-bio]/Microbiology and Parasitology/ParasitologyPathogenCoevolution030304 developmental biology0303 health sciences[ SDE.BE ] Environmental Sciences/Biodiversity and EcologyHost (biology)biochemical phenomena metabolism and nutritioninfectionvirulence[SDV.IMM.IA]Life Sciences [q-bio]/Immunology/Adaptive immunologyEvolutionary biologyImmunologybacteriaAnimal Science and Zoology[SDE.BE]Environmental Sciences/Biodiversity and Ecology[SDV.EE.IEO]Life Sciences [q-bio]/Ecology environment/SymbiosisCoevolution
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Interpreting immunological indices: the importance of taking parasite community into account. An example in blackbirds Turdus merula.

2015

13 pages; International audience; Despite the intensive use of immune indices in immunoecology, whether to interpret the results of immune indices in terms of actual immune competence (i.e. ability to control and clear parasite infections as indicated by high values of immune indices associated with low parasite loads) or current immune activation (pathogenic infection being associated with high parasite load and high values of immune indices) is still an open question. Most studies to date have produced contrasting results focused on the effect of a single parasite species despite the fact that hosts usually harbour a community of parasites that influences one another's impact on host immu…

0106 biological sciences[ SDV.MP.PAR ] Life Sciences [q-bio]/Microbiology and Parasitology/Parasitologyanimal diseaseschemical and pharmacologic phenomenaongoing infectionBiologyintestinal parasites010603 evolutionary biology01 natural sciencesParasite load03 medical and health sciencesImmune system[ SDV.EE.IEO ] Life Sciences [q-bio]/Ecology environment/Symbiosis[ SDV.IMM ] Life Sciences [q-bio]/ImmunologyParasite hostingParasite Infections[SDV.MP.PAR]Life Sciences [q-bio]/Microbiology and Parasitology/ParasitologyBlood parasitesEcology Evolution Behavior and Systematicsimmunoecology030304 developmental biology[ SDE.BE ] Environmental Sciences/Biodiversity and Ecology0303 health sciencesimmunocompetenceEcological ModelingSignificant partbiochemical phenomena metabolism and nutrition3. Good healthbirdsImmunologyparasite communitybacteria[SDV.IMM]Life Sciences [q-bio]/ImmunologyImmunocompetence[SDE.BE]Environmental Sciences/Biodiversity and EcologyImmune activationimmune assay[SDV.EE.IEO]Life Sciences [q-bio]/Ecology environment/Symbiosis
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Detection and Characterization of Wolbachia Infections in Natural Populations of Aphids: Is the Hidden Diversity Fully Unraveled?

2011

Copyright © 2011 Augustinos et al. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Aphids are a serious threat to agriculture, despite being a rather small group of insects. The about 4,000 species worldwide engage in highly interesting and complex relationships with their microbial fauna. One of the key symbionts in arthropods is Wolbachia, an a-Proteobacterium implicated in many important biological processes and believed to be a potential tool for biological control. Aphids were thought not to harbour W…

0106 biological sciences[SDV]Life Sciences [q-bio]FaunaPopulation DynamicsBiological pest controllcsh:MedicineWolbachia InfectionsPolymerase Chain Reaction01 natural sciencesRNA Ribosomal 16SGenotypelcsh:SciencePhylogenyreproductive and urinary physiologyGenetics0303 health sciencesMultidisciplinaryfood and beveragesAgricultureWolbachiaWolbachiaResearch ArticleGenotypeMolecular Sequence DataAgro-Population EcologyZoologyBiologyDNA RibosomalMicrobiology010603 evolutionary biologyMicrobial Ecology03 medical and health sciencesPhylogeneticsparasitic diseasesGenetic variationAnimalsBiologyAlleles030304 developmental biologyEvolutionary Biologylcsh:RBacterial TaxonomyGenetic VariationBacteriologybiochemical phenomena metabolism and nutritionRibosomal RNAbiology.organism_classificationOrganismal EvolutionAphidsMicrobial EvolutionbacteriaMultilocus sequence typinglcsh:QGram-Negative Bacterial InfectionsZoologyEntomologyAgroecologyMultilocus Sequence TypingPLoS ONE
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Antibiofilm activity of coriander (Coriander sativum L.) grown in Argentina against food contaminants and human pathogenic bacteria

2020

Abstract Bacterial spoilage of food and other infections are a coordinated mechanism controlled by quorum sensing (QS), which regulate the expression of virulence factors, such as biofilm. The antimicrobial, antibiofilm, anti-QS and anti-swarming properties of hexane (HE), chloroform (CE), ethyl acetate (EAE), methanolic (ME) and total methanolic (TME) extracts of coriander grown in Argentina were investigated. In vivo extracts toxicity using Galleria mellonella L. model and chemical composition (GC-MS) were also assessed. The antibiofilm activity of polystyrene surfaces coated with the most active extracts was evaluated. At non-inhibitory growth concentrations, extracts showed a strong ant…

0106 biological sciencesbiology010405 organic chemistryPseudomonas aeruginosaChemistryFood spoilageBiofilmPathogenic bacteriabiochemical phenomena metabolism and nutritionbiology.organism_classificationmedicine.disease_causeAntimicrobial01 natural sciences0104 chemical sciencesSalmonella entericaStaphylococcus aureusmedicineFood scienceAgronomy and Crop ScienceBacteria010606 plant biology & botanyIndustrial Crops and Products
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