Search results for " space"

showing 10 items of 4562 documents

Symbiosis between river and dry lands: phycobiont dynamics on river gravel bars

2020

AbstractRiver gravel bars are dynamic and heterogeneous habitats standing on transition between aquatic and terrestrial environment. Periodical flooding, low nutrient content, frost, missing safe sites, drought, and heat on the ground surface significantly influence life in these habitats. Mutualistic symbiosis may be a successful strategy for organisms to survive and to proliferate under harsh conditions. The lichen genus Stereocaulon was selected as a model symbiotic system among the organisms living on river gravel bars. The aim of our work was to determine effect of this dynamic environment on a phycobiont (i.e., green eukaryotic photobiont) community structure. We analysed 147 Stereoca…

0301 basic medicine0106 biological sciencesfood.ingredientEcological succession010603 evolutionary biology01 natural sciences03 medical and health sciencesfoodAlgaeSymbiosisBotanyInternal transcribed spacerLichen030304 developmental biology0303 health sciencesbiologyEcologyStereocaulonCommunity structureBiota15. Life on landbiology.organism_classificationThallusColonisation030104 developmental biology13. Climate actionAgronomy and Crop Science
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Neither Diplectanum nor specific: a dramatic twist to the taxonomic framework of Diplectanum (Monogenea: Diplectanidae).

2019

The taxonomy of the genus Diplectanum has been exclusively based on morphological features, with 28 nominal species parasitic on perciform fishes recognised. We used molecular data, to our knowledge for the first time, to evaluate the taxonomic framework of Diplectanum, infer the relationships amongst species attributed to this genus, re-assess the degree of host specificity and explore the population genetic structure of Diplectanum spp. parasitising Mediterranean sciaenids, which are potential target fish species for aquaculture diversification in the region. A minimum of 10 specimens of Diplectanum spp. were sequenced per host species (Argyrosomus regius, Sciaena umbra, Umbrina canariens…

0301 basic medicine030231 tropical medicinePopulationZoologyTrematode InfectionsBiologyHost Specificity03 medical and health sciencesMonophylyFish Diseases0302 clinical medicineGenusAnimalsInternal transcribed spacereducationPhylogenyeducation.field_of_studyCytochrome c oxidase subunit IFishesGenetic divergenceType species030104 developmental biologyInfectious DiseasesMolecular phylogeneticsParasitologyTrematodaInternational journal for parasitology
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Urban upbringing and childhood respiratory and allergic conditions: A multi-country holistic study

2018

Objective: We integratively assessed the effect of different indoor and outdoor environmental exposures early in life on respiratory and allergic health conditions among children from (sub-) urban areas. Methods: This study included children participating in four ongoing European birth cohorts located in three different geographical regions: INMA (Spain), LISAplus (Germany), GINIplus (Germany) and BAMSE (Sweden). Wheezing, bronchitis, asthma and allergic rhinitis throughout childhood were assessed using parental-completed questionnaires. We designed “environmental scores” corresponding to different indoor, green- and grey-related exposures (main analysis, a-priori-approach). Cohort-specific…

0301 basic medicine05 Environmental SciencesIndoor exposureFirst year of lifeMicrobial loadToxicologyBiochemistryGrey spaceAllergic rhinitis03 medical and health sciences0302 clinical medicineGermanyEnvironmental healthmedicineHumansRespiratory systemChildRespiratory SoundsGeneral Environmental ScienceAsthmaSwedenGreen space2. Zero hungerbusiness.industryEnvironmental ExposureOdds ratio06 Biological Sciencesmedicine.diseaseRhinitis AllergicAsthmaConfidence intervalConfirmatory factor analysis3. Good health030104 developmental biology030228 respiratory systemSpainBronchitisEnvironmental Pollutants03 Chemical SciencesbusinessAllergic Rhinitis ; Asthma ; Green Space ; Grey Space ; Indoor Exposure ; Microbial LoadMulti countryEnvironmental Research
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Polyphosphate as a donor of high-energy phosphate for the synthesis of ADP and ATP.

2017

Here, we studied the potential role of inorganic polyphosphate (polyP) as an energy source for ADP and ATP formation in the extracellular space. In SaOS-2 cells, we show that matrix vesicles are released into the extracellular space after incubation with polyP. These vesicles contain both alkaline phosphatase (ALP) and adenylate kinase (AK) activities (mediated by ALPL and AK1 enzymes). Both enzymes translocate to the cell membrane in response to polyP. To distinguish the process(es) of AMP and ADP formation during ALP hydrolysis from the ATP generated via the AK reaction, inhibition studies with the AK inhibitor A(5')P5(5')A were performed. We found that ADP formation in the extracellular …

0301 basic medicineAdenylate kinaseBiologydigestive systemExocytosisCatalysisCell membrane03 medical and health scienceschemistry.chemical_compound0302 clinical medicineAdenosine TriphosphatePolyphosphatesExtracellularmedicineTumor Cells CulturedHumansPhosphorylationchemistry.chemical_classificationATP synthasePolyphosphateAdenylate KinaseCell BiologyAlkaline PhosphataseAdenosine DiphosphateKinetics030104 developmental biologyEnzymemedicine.anatomical_structurechemistryBiochemistry030220 oncology & carcinogenesisbiology.proteinEnergy sourceEnergy MetabolismExtracellular SpaceJournal of cell science
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Crude oil exposures reveal roles for intracellular calcium cycling in haddock craniofacial and cardiac development.

2016

AbstractRecent studies have shown that crude oil exposure affects cardiac development in fish by disrupting excitation-contraction (EC) coupling. We previously found that eggs of Atlantic haddock (Melanogrammus aeglefinus) bind dispersed oil droplets, potentially leading to more profound toxic effects from uptake of polycyclic aromatic hydrocarbons (PAHs). Using lower concentrations of dispersed crude oil (0.7–7 μg/L ∑PAH), here we exposed a broader range of developmental stages over both short and prolonged durations. We quantified effects on cardiac function and morphogenesis, characterized novel craniofacial defects, and examined the expression of genes encoding potential targets underly…

0301 basic medicineCardiac function curveFish ProteinsVDP::Mathematics and natural scienses: 400::Zoology and botany: 480::Marine biology: 497:Matematikk og naturvitenskap: 400::Kjemi: 440::Miljøkjemi naturmiljøkjemi: 446 [VDP]MorphogenesisIntracellular Space010501 environmental sciencesBiology:Mathematics and natural scienses: 400::Zoology and botany: 480::Marine biology: 497 [VDP]01 natural sciencesCalcium in biologyIon ChannelsArticleMyoblasts03 medical and health sciencesMorphogenesisVDP::Mathematics and natural scienses: 400::Chemistry: 440::Environmental chemistry natural environmental chemistry: 446AnimalsPetroleum PollutionCraniofacialPolycyclic Aromatic HydrocarbonsIon channel:Mathematics and natural scienses: 400::Chemistry: 440::Environmental chemistry natural environmental chemistry: 446 [VDP]Cells Cultured0105 earth and related environmental sciences:Matematikk og naturvitenskap: 400::Zoologiske og botaniske fag: 480::Marinbiologi: 497 [VDP]Calcium metabolismRegulation of gene expressionLife Cycle StagesMultidisciplinarySkullFishesGene Expression Regulation DevelopmentalHeartAnatomyEnvironmental ExposureCell biology030104 developmental biologyPetroleumVDP::Matematikk og naturvitenskap: 400::Zoologiske og botaniske fag: 480::Marinbiologi: 497VDP::Matematikk og naturvitenskap: 400::Kjemi: 440::Miljøkjemi naturmiljøkjemi: 446CalciumIntracellularScientific reports
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New insights into the mechanism of action of pyrazolo[1,2-a]benzo[1,2,3,4]tetrazin-3-one derivatives endowed with anticancer potential

2018

Due to the scarce biological profile, the pyrazolo[1,2-a]benzo[1,2,3,4]tetrazine-3-one scaffold (PBT) has been recently explored as promising core for potential anticancer candidates. Several suitably decorated derivatives (PBTs) exhibited antiproliferative activity in the low-micromolar range associated with apoptosis induction and cell cycle arrest on S phase. Herein, we selected the most active derivatives and submitted them to further biological explorations to deepen the mechanism of action. At first, a DNA targeting is approached by means of flow Linear Dichroism experiments so as to evaluate how small planar molecules might interact with DNA, including the interference with the catal…

0301 basic medicineCell cycle checkpointPyrazolo[1TetrazolesBiochemistrychemistry.chemical_compound0302 clinical medicineSalmonAntiproliferative; DNA-interacting; Intercalation; Linear dichroism; Molecular docking; Pyrazolo[12-a]benzo[1234]tetrazin-3-one; Topoisomerase II; Biochemistry; Molecular MedicineDrug DiscoveryDNA-interactingBase PairingADMEbiologyIntercalating AgentsMolecular Docking Simulation030220 oncology & carcinogenesisMolecular Medicinemedicine.symptomtopoisomerase II3StereochemistryIn silico2Antineoplastic Agentslinear dichroism03 medical and health sciencesantiproliferativeintercalationmedicineAnimalsHumansDNA Cleavage2-a]benzo[1Pharmacology4]tetrazin-3-oneBinding SitesTopoisomeraseOrganic ChemistryDNAmolecular dockingSettore CHIM/08 - Chimica FarmaceuticaChemical spaceProtein Structure TertiaryDNA Topoisomerases Type II030104 developmental biologyMechanism of actionchemistryCatalytic cyclebiology.proteinpyrazolo[12-a]benzo[1234]tetrazin-3-oneDNAChemical Biology & Drug Design
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On the continuous and discontinuous maximal operators

2018

Abstract In the first part of this paper we study the regularity properties of a wide class of maximal operators. These results are used to show that the spherical maximal operator is continuous W 1 , p ( R n ) ↦ W 1 , p ( R n ) , when p > n n − 1 . Other given applications include fractional maximal operators and maximal singular integrals. On the other hand, we show that the restricted Hardy–Littlewood maximal operator M λ , where the supremum is taken over the cubes with radii greater than λ > 0 , is bounded from L p ( R n ) to W 1 , p ( R n ) but discontinuous.

0301 basic medicineClass (set theory)Applied Mathematicsta111010102 general mathematicsoperatorsSingular integralcontinuity01 natural sciencesInfimum and supremumCombinatorics03 medical and health sciences030104 developmental biologySobolev spacesBounded functionjatkuvuusMaximal operator0101 mathematicsmaximal operatorAnalysisoperaattorit (matematiikka)MathematicsNonlinear Analysis
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Quantitatively characterizing drug-induced arrhythmic contractile motions of human stem cell-derived cardiomyocytes.

2018

Quantification of abnormal contractile motions of cardiac tissue has been a noteworthy challenge and significant limitation in assessing and classifying the drug-induced arrhythmias (i.e. Torsades de pointes). To overcome these challenges, researchers have taken advantage of computational image processing tools to measure contractile motion from cardiomyocytes derived from human induced pluripotent stem cells (hiPSC-CMs). However, the amplitude and frequency analysis of contractile motion waveforms doesn't produce sufficient information to objectively classify the degree of variations between two or more sets of cardiac contractile motions. In this paper, we generated contractile motion dat…

0301 basic medicineComputer scienceImage ProcessingComputational algorithmArrhythmiasRegenerative MedicineCardiovascularApplied Microbiology and Biotechnologyphase space reconstruction0302 clinical medicineComputer-AssistedImage Processing Computer-AssistedMyocytes CardiacComputingMilieux_MISCELLANEOUS[ INFO.INFO-IM ] Computer Science [cs]/Medical ImagingStem Cell Research - Induced Pluripotent Stem Cell - HumanOptical ImagingHeart DiseaseNetworking and Information Technology R&DStem cellBiological systemCardiacBiotechnologyCytological TechniquesInduced Pluripotent Stem CellsOptical flowTorsades de pointesImage processingBioengineeringarrhythmiaArticlebiosignal processingoptical flow03 medical and health sciencesMotionMatch movingmedicine[INFO.INFO-IM]Computer Science [cs]/Medical ImagingHumansMyocytesStem Cell Research - Induced Pluripotent Stem CellCardiac arrhythmiaArrhythmias CardiacTissue physiologymedicine.diseaseStem Cell ResearchMyocardial Contractioncardiac motion030104 developmental biology030217 neurology & neurosurgerySoftware
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Topographic Independent Component Analysis reveals random scrambling of orientation in visual space

2017

Neurons at primary visual cortex (V1) in humans and other species are edge filters organized in orientation maps. In these maps, neurons with similar orientation preference are clustered together in iso-orientation domains. These maps have two fundamental properties: (1) retinotopy, i.e. correspondence between displacements at the image space and displacements at the cortical surface, and (2) a trade-off between good coverage of the visual field with all orientations and continuity of iso-orientation domains in the cortical space. There is an active debate on the origin of these locally continuous maps. While most of the existing descriptions take purely geometric/mechanistic approaches whi…

0301 basic medicineComputer scienceVisionVisual spaceStatistics as Topiclcsh:MedicineSocial SciencesSpace (mathematics)Scramblingchemistry.chemical_compound0302 clinical medicineCognitionLearning and MemoryAnimal CellsMedicine and Health SciencesPsychologylcsh:Sciencemedia_commonVisual CortexNeuronsMammalsObject RecognitionCoding MechanismsBrain MappingMultidisciplinaryGeographyOrientation (computer vision)Visual fieldmedicine.anatomical_structureVertebratesSensory PerceptionCellular TypesAnatomyNeuronal TuningResearch ArticleCartographyPrimatesmedia_common.quotation_subjectOcular AnatomyRetina03 medical and health sciencesTopographic MapsOcular SystemMemoryPerceptionOrientationNeuronal tuningmedicineAnimalsHumansCortical surfaceComputational NeuroscienceRetinabusiness.industrylcsh:ROrganismsCognitive PsychologyBiology and Life SciencesComputational BiologyRetinalPattern recognitionCell Biology030104 developmental biologyVisual cortexchemistryRetinotopyCellular NeuroscienceAmniotesEarth SciencesCognitive Sciencelcsh:QPerceptionArtificial intelligencebusiness030217 neurology & neurosurgeryNeurosciencePLoS ONE
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Transmembrane signaling and cytoplasmic signal conversion by dimeric transmembrane helix 2 and a linker domain of the DcuS sensor kinase

2020

Transmembrane (TM) signaling is a key process of membrane-bound sensor kinases. The C4-dicarboxylate (fumarate) responsive sensor kinase DcuS of Escherichia coli is anchored by TM helices TM1 and TM2 in the membrane. Signal transmission across the membrane relies on the piston-type movement of the periplasmic part of TM2. To define the role of TM2 in TM signaling, we use oxidative Cys cross-linking to demonstrate that TM2 extends over the full distance of the membrane and forms a stable TM homodimer in both the inactive and fumarate-activated state of DcuS. An S186xxxGxxxG194 motif is required for the stability and function of the TM2 homodimer. The TM2 helix further extends on the periplas…

0301 basic medicineCytoplasmGpA glycophorin AC4DC C4-dicarboxylateCL cross-linkingpiston-typeMBP maltose-binding proteinBiochemistry03 medical and health sciencesProtein DomainsDcuSEscherichia coli(Gly)xxx(Gly) motifMolecular Biologysensor kinasefumarate030102 biochemistry & molecular biologyChemistryEscherichia coli ProteinsCell MembraneHistidine kinaseGene Expression Regulation BacterialCell BiologyPeriplasmic spacelinkerTransmembrane proteinoxidative Cys cross-linkingTransmembrane domain030104 developmental biologyMembrane proteinProtein kinase domainHelixBiophysicsProtein MultimerizationProtein Kinasestransmembrane signalingLinkerResearch ArticleTM transmembraneJournal of Biological Chemistry
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