Search results for " taxonomy."

showing 10 items of 313 documents

An account on the taxonomy and molecular diversity of a marine rock-pool dweller, Tigriopus fulvus (Copepoda, Harpacticoida)

2019

[ES] El género de copépodos Tigriopus Norman, 1869 se distribuye en todo el mundo en charcas de rocas costeras y se considera que actualmente incluye 14 especies válidas. Tigriopus fulvus (Fischer 1860), con sus subespecies Tigriopus fulvus adriaticus Van Douwe 1913 y Tigriopus fulvus algiricus Monard 1935, y Tigriopus minutus Bozic 1960 han sido descritos para el área del Mediterráneo, pero la diversidad real del género es desconocida actualmente. El objetivo de este estudio fue evaluar la identidad real de las poblaciones mediterráneas de Tigriopus y dilucidar su taxonomía y patrón de diversidad genética. Con este fin, se secuenció un fragmento del gen de ADN mitocondrial (citocromo c oxi…

0106 biological sciencesTigriopusZOOLOGIATaxonomía basada en ADNSettore BIO/05 - ZoologiaZoologyMonopolización periódicaAquatic ScienceSubspecies01 natural sciencesHarpacticoidaDNA taxonomyTECNOLOGIA DEL MEDIO AMBIENTEgeographyGenetic diversitygeography.geographical_feature_categorybiologyGenetic structuring010604 marine biology & hydrobiologyCytochrome c oxidase subunit Igenetic structuring clockwork monopolization rocky shore communities cryptic species DNA taxonomyComunidades de costas rocosasbiology.organism_classificationEstructuración genéticaRocky shore communitiesGenetic structureCryptic speciesClockwork monopolizationTaxonomy (biology)Especies crípticasestructuración genética monopolización periódica comunidades de costas rocosas especies crípticas taxonomía basada en ADNTide pool
researchProduct

Molecular phylogeny of the extinct giant deer, Megaloceros giganteus.

2006

a Centre de Genetique Moleculaire et Cellulaire (CGMC), CNRS UMR 5534, Universite Claude Bernard Lyon 1, Villeurbanne, France b Laboratoire d’Anthropologie des Populations du Passe, CNRS UMR 5199 PACEA, Universite Bordeaux 1, Talence, France c UCD School of Biology and Environmental Science, UCD, BelWeld, Dublin 4, Ireland d Laboratoire d’Ecologie des Hydrosystemes Fluviaux, CNRS UMR 5023, Universite Claude Bernard Lyon 1, Villeurbanne, France e Biogeosciences-Dijon, CNRS UMR 5561, Universite de Bourgogne, Centre des Sciences de la Terre, Dijon, France f Department of Palaeontology, Royal Belgian Institute of Natural Sciences, Brussels, Belgium g Department of Biology, University College Lo…

0106 biological sciencesTime FactorsMESH: GeographyMESH: Base Sequence[SDV.BID.SPT]Life Sciences [q-bio]/Biodiversity/Systematics Phylogenetics and taxonomy01 natural sciencesMESH: FossilsMESH : BiodiversityMESH: AnimalsMESH: PhylogenyGiant deerPhylogenyComputingMilieux_MISCELLANEOUS[ SDU.STU.PG ] Sciences of the Universe [physics]/Earth Sciences/Paleontology0303 health sciencesbiologyAncient DNAGeographyEcologymtDNAFossils[SDV.BID.EVO]Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE]MegalocerosMESH : GeographyClaude bernardBiodiversityMESH : Deer[ SDV.GEN.GPO ] Life Sciences [q-bio]/Genetics/Populations and Evolution [q-bio.PE][SDU.STU.PG]Sciences of the Universe [physics]/Earth Sciences/PaleontologyMESH : Time Factors[SDV.OT]Life Sciences [q-bio]/Other [q-bio.OT]MESH: Deer010603 evolutionary biologyMESH: BiodiversityQuaternary03 medical and health sciencesGeneticsAnimals14. Life underwaterMolecular BiologyEcology Evolution Behavior and Systematics030304 developmental biologyBase SequenceDeerMESH: Time FactorsMESH : Phylogenybiology.organism_classificationMESH : FossilsMESH : Base SequenceMESH : AnimalsHumanities[ SDV.BID.SPT ] Life Sciences [q-bio]/Biodiversity/Systematics Phylogenetics and taxonomy
researchProduct

A molecular phylogeny for the leaf-roller moths (Lepidoptera: Tortricidae) and its implications for classification and life history evolution.

2012

BackgroundTortricidae, one of the largest families of microlepidopterans, comprise about 10,000 described species worldwide, including important pests, biological control agents and experimental models. Understanding of tortricid phylogeny, the basis for a predictive classification, is currently provisional. We present the first detailed molecular estimate of relationships across the tribes and subfamilies of Tortricidae, assess its concordance with previous morphological evidence, and re-examine postulated evolutionary trends in host plant use and biogeography.Methodology/principal findingsWe sequenced up to five nuclear genes (6,633 bp) in each of 52 tortricids spanning all three subfamil…

0106 biological sciencesTortricidaeGenetic SpeciationScienceZoologyChlidanotinaeGenes InsectMothsAnimal Phylogenetics010603 evolutionary biology01 natural sciencesEvolution MolecularMonophylyPhylogeneticsAnimalsEvolutionary SystematicsOlethreutinaeBiologyPhylogenyLikelihood FunctionsEvolutionary BiologyMultidisciplinarybiologyPhylogenetic treeEcologyQRComputational BiologyAgricultureBiodiversityAutecologybiology.organism_classificationPhylogenetics010602 entomologyBiogeographyEvolutionary biologyAnimal TaxonomyMolecular phylogeneticsMedicinePest ControlSequence AnalysisZoologyEntomologyTortricinaeMultilocus Sequence TypingResearch ArticlePloS one
researchProduct

Colonisation and diversification of the Zenaida dove (Zenaida aurita) in the Antilles: phylogeography, contemporary gene flow and morphological diver…

2013

12 pages; International audience; Caribbean avifaunal biogeography has been mainly studied based on mitochondrial DNA. Here, we investigated both past and recent island differentiation and micro-evolutionary changes in the Zenaida Dove (Zenaida aurita) based on combined information from one mitochondrial (Cytochrome c Oxydase subunit I, COI) and 13 microsatellite markers and four morphological characters. This Caribbean endemic and abundant species has a large distribution, and two subspecies are supposed to occur: Z. a. zenaida in the Greater Antilles (GA) and Z. a. aurita in the Lesser Antilles (LA). Doves were sampled on two GA islands (Puerto Rico and the British Virgin Islands) and six…

0106 biological sciencesZenaida auritaGene FlowBiogeographyPopulation DynamicsZoologyPopulation geneticslcsh:MedicineSubspecies[SDV.BID.SPT]Life Sciences [q-bio]/Biodiversity/Systematics Phylogenetics and taxonomy010603 evolutionary biology01 natural sciencesDNA MitochondrialElectron Transport Complex IV03 medical and health sciencesAnimalsCluster Analysis14. Life underwaterlcsh:ScienceColumbidae030304 developmental biologyIsolation by distanceIslands0303 health sciencesAnalysis of Variance[ SDE.BE ] Environmental Sciences/Biodiversity and EcologyMultidisciplinarybiologyBase SequenceEcologylcsh:RBody WeightGenetic VariationBiodiversitybiology.organism_classificationColonisationPhylogeographyPhylogeographyCaribbean RegionHaplotypeslcsh:QAnimal Migration[SDE.BE]Environmental Sciences/Biodiversity and EcologyMartinique[ SDV.BID.SPT ] Life Sciences [q-bio]/Biodiversity/Systematics Phylogenetics and taxonomyResearch ArticleMicrosatellite Repeats
researchProduct

New insight into the colonization processes of common voles: inferences from molecular and fossil evidence.

2008

Biologie et Gestion des Populations, Campus International de Baillarguet, Montferrier/Lez, FranceElucidating the colonization processes associated with Quaternary climatic cycles is important in order to understand the distribution of biodiversity and the evolutionary potential of temperate plant and animal species. In Europe, general evolutionary scenarios have been defined from genetic evidence. Recently, these scenarios have been challenged with genetic as well as fossil data. The origins of the modern distributions of most temperate plant and animal species could predate the Last Glacial Maximum. The glacial survival of such populations may have occurred in either southern (Mediterranea…

0106 biological sciences[ SDE.BE.BIOD ] Environmental Sciences/Biodiversity and Ecology/domain_sde.be.biodBiodiversitylcsh:Medicine[SDV.BID.SPT]Life Sciences [q-bio]/Biodiversity/Systematics Phylogenetics and taxonomy01 natural sciencesbiodiversitéEvolutionary Biology/Animal GeneticsMaximum-LikelihoodControl RegionGlacial periodévolutionlcsh:SciencePhylogenyévolution biologiqueMismatch Distributionchangement climatique0303 health sciencesMultidisciplinarybiologyArvicolinaeFossilsEcology[SDV.BID.EVO]Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE]mammifèreFossil RecordCytochromes bEuropePhylogeographyHabitatResearch ArticleEvolutionary Biology/PaleontologyGene FlowClimatic ChangesGenetic SpeciationcolonisationMolecular DatingCytochrome b010603 evolutionary biologyQuaternary03 medical and health sciencesAnimalsMicrotusDemography030304 developmental biologyBayesian ApproachEvolutionary Biology/Evolutionary and Comparative GeneticsrongeurHuman evolutionary geneticslcsh:RGenetic Variation[SDV.BBM.BM]Life Sciences [q-bio]/Biochemistry Molecular Biology/Molecular biologySequence Analysis DNAmicrotus arvalis15. Life on landbiology.organism_classificationBiogeographic TraitsPhylogeographyGenetic SpeciationBiological dispersalAnimal Migrationlcsh:QCommon Vole
researchProduct

Cucumispora dikerogammari n. gen. (Fungi: Microsporidia) infecting the invasive amphipod Dikerogammarus villosus: a potential emerging disease in Eur…

2010

SUMMARYDikerogammarus villosusis an invasive amphipod that recently colonized the main rivers of Central and Western Europe. Two frequent microsporidian parasites were previously detected in this species, but their taxonomic status was unclear. Here we present ultrastructural and molecular data indicating that these two parasites are in fact a single microsporidian species. This parasite shares numerous characteristics ofNosemaspp. It forms elongate spores (cucumiform), developing in direct contact with host cell cytoplasm; all developmental stages are diplokaryotic and the life cycle is monomorphic with disporoblastic sporogony. Initially this parasite was described asNosema dikerogammariO…

0106 biological sciences[ SDV.MP.PAR ] Life Sciences [q-bio]/Microbiology and Parasitology/ParasitologySSU rDNAZoologybiological invasion[SDV.BID.SPT]Life Sciences [q-bio]/Biodiversity/Systematics Phylogenetics and taxonomyphylogeny010603 evolutionary biology01 natural sciencesDikerogammarus villosusHost-Parasite InteractionsCucumispora gen. sp03 medical and health sciencesNosema dikerogammariMicroscopy Electron TransmissionRiversSpecies Specificity[ SDV.EE.IEO ] Life Sciences [q-bio]/Ecology environment/SymbiosisParasite hostingAnimals[SDV.MP.PAR]Life Sciences [q-bio]/Microbiology and Parasitology/ParasitologyAmphipodaCucumispora gen. sp.DNA FungalRibosomal DNA030304 developmental biology0303 health sciencesLife Cycle Stages[ SDE.BE ] Environmental Sciences/Biodiversity and EcologybiologyDikerogammarus villosusSequence Analysis DNASpores Fungalbiology.organism_classificationEuropeInfectious DiseasesNosemaMicrosporidiaHost cell cytoplasmMicrosporidiaAnimal Science and ZoologyParasitologyPolar filament[SDE.BE]Environmental Sciences/Biodiversity and EcologySequence AlignmentHorizontal transmission[ SDV.BID.SPT ] Life Sciences [q-bio]/Biodiversity/Systematics Phylogenetics and taxonomy[SDV.EE.IEO]Life Sciences [q-bio]/Ecology environment/Symbiosis
researchProduct

Pseudomonas salomonii sp. nov., pathogenic on garlic, and Pseudomonas palleroniara sp. nov., isolated from rice

2002

International audience; A total of 26 strains, including 15 strains isolated from garlic plants with the typical symptoms of 'Café au lait' disease and 11 strains isolated from diseased or healthy rice seeds and sheaths infested by Pseudomonas fuscovaginae, were compared with 70 type or reference strains of oxidase-positive pathogenic or non-pathogenic fluorescent pseudomonads. The strains were characterized by using a polyphasic taxonomic approach. Numerical taxonomy of phenotypic characteristics showed that the garlic and rice strains were related to each other. However, they clustered into separate phenons, distinct from those of the other strains tested, and were different in several nu…

0106 biological sciences[SDV.SA]Life Sciences [q-bio]/Agricultural sciencesIdentificationADNPhénotype01 natural sciencesphenotypic characteristicsPseudomonas fuscovaginaeRNA Ribosomal 16SPhylogeny2. Zero hungerBase Composition0303 health sciencesbiologyPhylogenetic treeDNA–DNA hybridizationfood and beveragesGeneral MedicinePseudomonas palleronianaRNA BacterialPhenotypehttp://aims.fao.org/aos/agrovoc/c_5435Pseudomonas palleronianaPseudomonas salomoniiAllium sativumhttp://aims.fao.org/aos/agrovoc/c_290DNA Bacterialhttp://aims.fao.org/aos/agrovoc/c_27578Pseudomonas salomoniiPhenotypic characteristicMolecular Sequence DataDNA Ribosomal010603 evolutionary biologyMicrobiologyMicrobiologyNumerical taxonomy03 medical and health sciencesTerminology as TopicPseudomonaspolyphasic taxonomyGarlicGeneEcology Evolution Behavior and SystematicsH20 - Maladies des plantes030304 developmental biologyDNA-DNA hybridizationHybridation moléculaireSettore AGR/12 - Patologia VegetaleOryzaTaxonomie16S ribosomal RNAbiology.organism_classificationhttp://aims.fao.org/aos/agrovoc/c_3791http://aims.fao.org/aos/agrovoc/c_6304http://aims.fao.org/aos/agrovoc/c_5776Genes Bacterialhttp://aims.fao.org/aos/agrovoc/c_2347http://aims.fao.org/aos/agrovoc/c_7631
researchProduct

Detection and Characterization of Wolbachia Infections in Natural Populations of Aphids: Is the Hidden Diversity Fully Unraveled?

2011

Copyright © 2011 Augustinos et al. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Aphids are a serious threat to agriculture, despite being a rather small group of insects. The about 4,000 species worldwide engage in highly interesting and complex relationships with their microbial fauna. One of the key symbionts in arthropods is Wolbachia, an a-Proteobacterium implicated in many important biological processes and believed to be a potential tool for biological control. Aphids were thought not to harbour W…

0106 biological sciences[SDV]Life Sciences [q-bio]FaunaPopulation DynamicsBiological pest controllcsh:MedicineWolbachia InfectionsPolymerase Chain Reaction01 natural sciencesRNA Ribosomal 16SGenotypelcsh:SciencePhylogenyreproductive and urinary physiologyGenetics0303 health sciencesMultidisciplinaryfood and beveragesAgricultureWolbachiaWolbachiaResearch ArticleGenotypeMolecular Sequence DataAgro-Population EcologyZoologyBiologyDNA RibosomalMicrobiology010603 evolutionary biologyMicrobial Ecology03 medical and health sciencesPhylogeneticsparasitic diseasesGenetic variationAnimalsBiologyAlleles030304 developmental biologyEvolutionary Biologylcsh:RBacterial TaxonomyGenetic VariationBacteriologybiochemical phenomena metabolism and nutritionRibosomal RNAbiology.organism_classificationOrganismal EvolutionAphidsMicrobial EvolutionbacteriaMultilocus sequence typinglcsh:QGram-Negative Bacterial InfectionsZoologyEntomologyAgroecologyMultilocus Sequence TypingPLoS ONE
researchProduct

First record of Tamarix macrocarpa (Tamaricaceae) for Europe

2017

AbstractTamarix macrocarpa, a species with distribution in Central and North Africa, in the countries bordering the Persian Gulf and in Central and western Asia is recorded for the first time for Europe. Pentamerous flowers and androecium diplostemonous characterize this small tree.

0106 biological sciencesbiologyEcologySettore BIO/02 - Botanica SistematicaTamarixNorth africaWestern asiaPlant Sciencebiology.organism_classification010603 evolutionary biology01 natural scienceslanguage.human_languageGeographySettore BIO/03 - Botanica Ambientale E ApplicataDistribution ecology taxonomy tamarisks EuropelanguageTamaricaceaeEcology Evolution Behavior and Systematics010606 plant biology & botanyPersianPlant Biosystems - An International Journal Dealing with all Aspects of Plant Biology
researchProduct

Integrative descriptions of two new Macrobiotus species (Tardigrada, Eutardigrada, Macrobiotidae) from Mississippi (USA) and Crete (Greece)

2021

In this paper, we describe two new Macrobiotus species from Mississippi (USA) and Crete (Greece) by means of integrative taxonomy. Detailed morphological data from light and scanning electron microscopy, as well as molecular data (sequences of four genetic markers: 18S rRNA, 28S rRNA, ITS-2 and COI), are provided in support of the descriptions of the new species. Macrobiotus annewintersaesp. nov. from Mississippi belongs to the Macrobiotus persimilis complex (Macrobiotus clade B) and exhibits a unique egg processes morphology, similar only to Macrobiotus anemone Meyer, Domingue & Hinton, 2014, but mainly differs from that species by the presence of eyes, granulation on all legs, den…

0106 biological scienceskarhukaisetQH301-705.5species delineationMacrobiotidae010607 zoologyTardigradaZoologyBiology010603 evolutionary biology01 natural sciencesMacrobiotusTardigradaAnimaliaBiology (General)Ecology Evolution Behavior and Systematicsintegrative taxonomymolecular phylogenyfylogeniasystematiikka (biologia)water bearsfylogenetiikkaMacrobiotus persimilis complexegg ornamentationEutardigradaParachelalajiutuminen
researchProduct