Search results for "117"
showing 10 items of 539 documents
Metagenomic insights into strategies of aerobic and anaerobic carbon and nitrogen transformation in boreal lakes
2015
Thousands of net-heterotrophic and strongly stratifying lakes dominate the boreal landscape. Besides their central role as emitters of greenhouse gases, we have only recently begun to understand the microbial systems driving the metabolic processes and elemental cycles in these lakes. Using shotgun metagenomics, we show that the functional potential differs among lake types, with humic lakes being particularly enriched in carbon degradation genes. Most of the metabolic pathways exhibit oxygen- and temperature-dependent stratification over depth, coinciding with shifts in bacterial community composition, implying that stratification is a major factor controlling lake metabolism. In the botto…
Classification and retrieval on macroinvertebrate image databases
2011
Aquatic ecosystems are continuously threatened by a growing number of human induced changes. Macroinvertebrate biomonitoring is particularly efficient in pinpointing the cause-effect structure between slow and subtle changes and their detrimental consequences in aquatic ecosystems. The greatest obstacle to implementing efficient biomonitoring is currently the cost-intensive human expert taxonomic identification of samples. While there is evidence that automated recognition techniques can match human taxa identification accuracy at greatly reduced costs, so far the development of automated identification techniques for aquatic organisms has been minimal. In this paper, we focus on advancing …
Vertical stratification patterns of methanotrophs and their genetic controllers in water columns of oxygen-stratified boreal lakes
2021
ABSTRACT The vertical structuring of methanotrophic communities and its genetic controllers remain understudied in the water columns of oxygen-stratified lakes. Therefore, we used 16S rRNA gene sequencing to study the vertical stratification patterns of methanotrophs in two boreal lakes, Lake Kuivajärvi and Lake Lovojärvi. Furthermore, metagenomic analyses were performed to assess the genomic characteristics of methanotrophs in Lovojärvi and the previously studied Lake Alinen Mustajärvi. The methanotroph communities were vertically structured along the oxygen gradient. Alphaproteobacterial methanotrophs preferred oxic water layers, while Methylococcales methanotrophs, consisting of putative…
Thermophilic anaerobic digestion of pulp and paper mill primary sludge and co-digestion of primary and secondary sludge
2012
Anaerobic digestion of pulp and paper mill primary sludge and co-digestion of primary and secondary sludge were studied for the first time in semi-continuously fed continuously stirred tank reactors (CSTR) in thermophilic conditions. Additionally, in batch experiments, methane potentials of 210 and 230 m³CH₄/t volatile solids (VS)(added) were obtained for primary, and 50 and 100 m³CH₄/tVS(added) for secondary sludge at 35 °C and 55 °C, respectively. Anaerobic digestion of primary sludge was shown to be feasible with organic loading rates (OLR) of 1-1.4 kgVS/m³d and hydraulic retention times (HRT) of 16-32 d resulting in methane yields of 190-240 m³CH₄/tVS(fed). Also the highest tested OLR o…
Vertical distribution of AhR-activating compounds in sediments contaminated by modernized pulp and paper industry
2013
Increased ethoxyresorufin-O-deethylase (EROD) activity is a sensitive biomarker of exposure to the chemicals which activate the aryl hydrocarbon receptor (AhR) and induce the cytochrome P450 system, such as many polychlorinated dibenzo-p-dioxins (PCDDs), polychlorinated dibenzofurans (PCDFs) and polychlorinated biphenyls (PCBs). Pulp bleaching was one of the main sources of PCDDs and PCDFs until elemental chlorine free (ECF) and total chlorine free bleaching processes since 1990s have remarkably decreased but not completely eliminate discharges of these chemicals. In addition, historically contaminated sediments may act as a source of these persistent contaminants. In this study, the contam…
We Are Still In! Conference report from the 2018 Ceres Conference
2018
This is a report on the 2018 Ceres Conference that took place from April 24 to 26 at the Park Plaza Hotel in Boston, MA. The conference theme was “Scale Up!” while the discussion centered mainly around the “We Are Still In!” movement that has emerged after the pull-out of the Paris Climate Agreement by the Trump administration. The conference was mainly attended by institutional investors, company executives and capital market leaders as well as NGOs and academics. The conference consisted of four plenary and four panel sessions as well as various networking events. nonPeerReviewed
Correlation between CD117+ myeloma plasma cells and hematopoietic progenitor cells in different categories of patients
2015
Background Multiple myeloma (MM) is a neoplastic disorder of plasma cells interesting mainly the elderly. MM remains an incurable disease, mostly because of the strong interplay between clonal plasma cells (cPCs) and bone marrow (BM) microenvironment. Multiparameter flow cytometry (MFC) allows the simultaneous study of the cPC immunophenotype and alterations involving other cells in BM, but rarely these data are interpreted as connected. One exception to this habit are previous studies about relationship between CD117 cPC positivity and hematopoietic progenitor cell (HPC) distribution in newly diagnosed patients. Thus we were interested in verifying the distribution of BM CD34+ HPCs in heal…
Gastrointestinal stromal tumors (GISTs): Focus on histopathological diagnosis and biomolecular features
2007
Gastrointestinal stromal tumors (GISTs) are mesenchymal tumors of the gastrointestinal tract that are believed to originate from a neoplastic transformation of the intestinal pacemaker cells (interstitial cells of Cajal) normally found in the bowel wall or their precursors. Although the microscopic features have been known for a long time, the defining characteristic of GIST is the presence of the cell-surface antigen CD117 (KIT), which is demonstrated by immunohistochemistry. KIT, which is a growth factor transmembrane receptor, is the product of the proto-oncogene c-kit (chromosome 4). Surgical removal remains the only curative treatment for patients with GISTs. Tumor size, mitotic index,…
Landowners’ willingness to promote bioenergy production on wasteland − future impact on land use of cutaway peatlands
2017
Landowners are the key players in bioenergy production on wasteland; such as cutaway peatlands. In this study, the landowner's interest to use cutaway peatlands for bioenergy production was investigated using a survey and GIS (Geographic Information Systems) methods in an area in South Ostrobothnia, Finland. The focus was to identify which different bioenergy production chains are preferred by the respondents: combustion, gasification or biogas production from agriculture, energy-willow short-rotation forestry or forestry based energy crops. Also, the influence of personal environmental values on the selection was measured and the future impacts and barriers for the land use were assessed. …
Stable carbon isotopic composition of peat columns, subsoil and vegetation on natural and forestry-drained boreal peatlands.
2018
We studied natural and forestry-drained peatlands to examine the effect of over 34 years lowered water table on the δ13C values of vegetation, bulk peat and subsoil. In the seven studied sites, δ13C in the basal peat layer was 1.1 and 1.2 ‰ lower than that of the middle-layer and surface layer, respectively. Furthermore, there was a positive correlation between the δ13C values of the basal and surface peat layers, possibly due to carbon (C) recycling within the peat column. In the same mire complex, natural fen peat δ13C values were lower than those of the nearby bog, possibly due to the dominance of vascular plants on fen and the generally larger share of recycled C in the fens than in the…