Search results for "14"
showing 10 items of 9841 documents
Taxonomy 2.0: computer-aided identification tools to assist Antarctic biologists in the field and in the laboratory
2020
Species inventories are essential to the implementation of conservation policies to mitigate biodiversity loss and maintain ecosystem services and their value to the society. This is particularly topical with respect to climate change and direct anthropogenic effects on Antarctic biodiversity, with the identification of the most at-risk taxa and geographical areas becoming a priority. Identification tools are often neglected and considered helpful only for taxonomists. However, the development of new online information technologies and computer-aided identification tools provides an opportunity to promote them to a wider audience, especially considering the emerging generation of scientists…
Benchmark database for fine-grained image classification of benthic macroinvertebrates
2018
Managing the water quality of freshwaters is a crucial task worldwide. One of the most used methods to biomonitor water quality is to sample benthic macroinvertebrate communities, in particular to examine the presence and proportion of certain species. This paper presents a benchmark database for automatic visual classification methods to evaluate their ability for distinguishing visually similar categories of aquatic macroinvertebrate taxa. We make publicly available a new database, containing 64 types of freshwater macroinvertebrates, ranging in number of images per category from 7 to 577. The database is divided into three datasets, varying in number of categories (64, 29, and 9 categori…
A multidisciplinary analytical framework to delineate spawning areas and quantify larval dispersal in coastal fish
2019
International audience; Assessing larval dispersal is essential to understand the structure and dynamics of marine populations. However, knowledge about early-life dispersal is sparse, and so is our understanding of the spawning process, perhaps the most obscure component of biphasic life cycles. Indeed, the poorly known species-specific spawning modality and early-life traits, along with the high spatio-temporal variability of the oceanic circulation experienced during larval drift, hamper our ability to properly appraise the realized connectivity of coastal fishes. Here, we propose an analytical framework which combines Lagrangian modeling, network theory, otolith analyses and biogeograph…
Protected areas buffer against harvest selection and rebuild phenotypic complexity
2020
14 pages, 6 figures, 4 tables.-- This is an open access article under the terms of the Creative Commons Attribution License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited
Large-scale distribution analysis of Antarctic echinoids using ecological niche modelling.
2012
Understanding the factors that determine the distribution of taxa at various spatial scales is a crucial challenge in the context of global climate change. This holds particularly true for polar marine biota that are composed of both highly adapted and vulnerable faunas. We analysed the distribution of 2 Antarctic echinoid species, Sterechinus antarcticus and S. neumayeri, at the scale of the entire Southern Ocean using 2 niche modelling procedures. The performance of distribution models was tested with regard to the known ecology of the species. The respective contributions of environmental parameters are discussed along with the putative roles played by biotic interactions and biogeograph…
Cost-efficiency assessments of marine monitoring methods lack rigor—a systematic mapping of literature and an end-user view on optimal cost-efficienc…
2021
Global deterioration of marine ecosystems, together with increasing pressure to use them, has created a demand for new, more efficient and cost-efficient monitoring tools that enable assessing changes in the status of marine ecosystems. However, demonstrating the cost-efficiency of a monitoring method is not straightforward as there are no generally applicable guidelines. Our study provides a systematic literature mapping of methods and criteria that have been proposed or used since the year 2000 to evaluate the cost-efficiency of marine monitoring methods. We aimed to investigate these methods but discovered that examples of actual cost-efficiency assessments in literature were rare, contr…
Plankton community composition in relation to availability and uptake of oxidized and reduced nitrogen
2003
Centre de Recherche en Ecologie Marine et Aquaculture de L'Houmeau (CNRS-IFREMER), BP 5, 17137 L'Houmeau, France ABSTRACT: Trends in nitrogen utilization, determined with 15 N-labeled substrates, were related to blooms of distinct phytoplankton groups in the Gulf of Riga, Baltic Sea, during May, June and July 1999. The dominant phytoplankton groups included diatoms, cryptophytes, dinoflagellates, and fila- mentous cyanobacteria. As the water column became progressively more stratified over the growing season, diatoms comprised a smaller proportion of the total phytoplankton assemblage and almost disappeared by late summer. Their disappearance correlated with undetectable surface-water nitra…
Stimulation of nitrogen-fixing cyanobacteria in a Baltic Sea plankton community by land-derived organic matter or iron addition
2006
In the Baltic Sea, floating blooms of nitrogen-fixing cyanobacteria occur yearly during late summer. These blooms can sometimes be limited by iron. Due to extensive foresting around the Baltic Sea, iron is entering the Baltic Sea partly bound to dissolved organic material (DOM) via rivers. An experiment was performed in 300 l laboratory mesocosms to test the hypothesis that riverine high- molecular weight dissolved organic matter (HMWDOM), extracted by tangential flow filtration >1000 Da, stimulates the biomass of nitrogen-fixing cyanobacteria, by increasing the availability of iron. The addition of iron/EDTA and of DOM resulted in 5 to 10 times higher biomass of nitrogen- fixing cyanobacte…
The use of spectral fluorescence methods to detect changes in the phytoplankton community
1998
In vivo fluorescence methods are efficient tools for studying the seasonal and spatial dynamics of phytoplankton. Traditionally the measurements are made using single excitation-emission wavelength combination. During a cruise in the Gulf of Riga (Baltic Sea) we supplemented this technique by measuring the spectral fluorescence signal (SFS) and fixed wavelength fluorescence intensities at the excitation maxima of main accessory pigments. These methods allowed the rapid collection of quantitative fluorescence data and chemotaxonomic diagnostics of the phytoplankton community. The chlorophyll a-specific fluorescence intensities (R) and the spectral fluorescence fingerprints were analysed toge…
The Importance of Phytoplankton Biomolecule Availability for Secondary Production
2017
The growth and reproduction of animals is affected by their access to resources. In aquatic ecosystems, the availability of essential biomolecules for filter-feeding zooplankton depends greatly on phytoplankton. Here, we analyzed the biochemical composition, i.e., the fatty acid, sterol and amino acid profiles and concentrations as well as protein, carbon, nitrogen, and phosphorus content of 17 phytoplankton monocultures representing the seven most abundant phytoplankton classes in boreal and sub-arctic lakes. To examine how the differences in the biochemical composition between phytoplankton classes affect their nutritional quality for consumers, we assessed the performance of Daphnia, on …