Search results for "Aphids"

showing 10 items of 74 documents

Genome sequence of the pea aphid Acyrthosiphon pisum

2010

The genome of the pea aphid shows remarkable levels of gene duplication and equally remarkable gene absences that shed light on aspects of aphid biology, most especially its symbiosis with Buchnera.

0106 biological sciencesTANDEM REPEATSGenome InsectGene TransferRRES175Sequència genòmicaFaculty of Science\Computer ScienceCPG METHYLATION01 natural sciencesGenomeMedical and Health SciencesInternational Aphid Genomics ConsortiumBiologiska vetenskaperBiology (General)GENE-EXPRESSION2. Zero hungerGenetics0303 health sciencesAphidGenomeAfídidsGeneral NeuroscienceGENOME SEQUENCEfood and beveragesDROSOPHILA CIRCADIAN CLOCKBiological SciencesGenetics and Genomics/Microbial Evolution and GenomicsINSECTEGenètica microbianapuceronAPIS-MELLIFERAGeneral Agricultural and Biological SciencesInfectionsymbioseBiotechnologyResearch ArticleVIRUS VECTORING175_GeneticsSYMBIOTIC BACTERIAGene Transfer HorizontalQH301-705.5ACYRTHOSIPHON PISUMBiologyHOLOMETABOLOUS INSECTSHOST-PLANT010603 evolutionary biologyGENOME SEQUENCE;PEA APHID;ACYRTHOSIPHON PISUM;INSECT-PLANT;HOST-PLANT;VIRUS VECTORING;PHENOTYPIC PLASTICITY;HOLOMETABOLOUS INSECTS;INSECTE;RAVAGEUR DES CULTURES; SOCIAL INSECTGeneral Biochemistry Genetics and Molecular BiologyHorizontal03 medical and health sciencesBuchneraPHENOTYPIC PLASTICITYINSECT-PLANTGeneticsGene familyLife ScienceAnimalsSymbiosisGene030304 developmental biologyWhole genome sequencingGeneral Immunology and MicrobiologyAnnotation; Aphid; Genome sequenceAgricultural and Veterinary Sciences175_EntomologyGenètica animalBacteriocytegénomegèneHuman GenomePEA APHIDBiology and Life Sciences15. Life on landbiochemical phenomena metabolism and nutritionbiology.organism_classificationREPETITIVE ELEMENTSDNA-SEQUENCESAcyrthosiphon pisumGenome SequenceGenetics and Genomics/Genome ProjectsRAVAGEUR DES CULTURESAphidsPHEROMONE-BINDINGBuchneraInsectDevelopmental Biology[SDV.EE.IEO]Life Sciences [q-bio]/Ecology environment/Symbiosis
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Genome reduction of the aphid endosymbiont Buchnera aphidicola in a recent evolutionary time scale.

2007

International audience; Genome reduction, a typical feature of symbiotic bacteria, was analyzed in the last stages of evolution of Buchnera aphidicola, the primary aphid endosymbiont, in two neutrally evolving regions: the pseudogene cmk and an intergenic region. These two regions were examined in endosymbionts from several lineages of their aphid host Rhopalosiphum padi, and different species of the same genus, whose divergence times ranged from 0.62 to 19.51 million years. Estimates of nucleotide substitution rates were between 4.3 and 6.7 x 10(-9) substitution/site/year, with G or C nucleotides being substituted around four times more frequently than A or T. Two different types of indel …

0106 biological sciencesTime FactorsPseudogeneBiology010603 evolutionary biology01 natural sciencesGenomeDNA MitochondrialEvolution Molecular03 medical and health sciencesIntergenic regionBuchneraPhylogeneticsGeneticsAnimalsMolecular clockIndelSymbiosisPhylogeny030304 developmental biologyGenetics0303 health sciences[SDV.GEN]Life Sciences [q-bio]/GeneticsBase SequenceGeographyNucleotidesGeneral Medicinebiology.organism_classificationFixation (population genetics)HaplotypesAphidsCalibrationMutationBuchneraGenome BacterialGene
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Detection and Characterization of Wolbachia Infections in Natural Populations of Aphids: Is the Hidden Diversity Fully Unraveled?

2011

Copyright © 2011 Augustinos et al. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. Aphids are a serious threat to agriculture, despite being a rather small group of insects. The about 4,000 species worldwide engage in highly interesting and complex relationships with their microbial fauna. One of the key symbionts in arthropods is Wolbachia, an a-Proteobacterium implicated in many important biological processes and believed to be a potential tool for biological control. Aphids were thought not to harbour W…

0106 biological sciences[SDV]Life Sciences [q-bio]FaunaPopulation DynamicsBiological pest controllcsh:MedicineWolbachia InfectionsPolymerase Chain Reaction01 natural sciencesRNA Ribosomal 16SGenotypelcsh:SciencePhylogenyreproductive and urinary physiologyGenetics0303 health sciencesMultidisciplinaryfood and beveragesAgricultureWolbachiaWolbachiaResearch ArticleGenotypeMolecular Sequence DataAgro-Population EcologyZoologyBiologyDNA RibosomalMicrobiology010603 evolutionary biologyMicrobial Ecology03 medical and health sciencesPhylogeneticsparasitic diseasesGenetic variationAnimalsBiologyAlleles030304 developmental biologyEvolutionary Biologylcsh:RBacterial TaxonomyGenetic VariationBacteriologybiochemical phenomena metabolism and nutritionRibosomal RNAbiology.organism_classificationOrganismal EvolutionAphidsMicrobial EvolutionbacteriaMultilocus sequence typinglcsh:QGram-Negative Bacterial InfectionsZoologyEntomologyAgroecologyMultilocus Sequence TypingPLoS ONE
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Happens in the best of subfamilies: establishment and repeated replacements of co-obligate secondary endosymbionts within Lachninae aphids.

2016

SummaryVirtually all aphids maintain an obligate mutualistic symbiosis with bacteria from theBuchneragenus, which produce essential nutrients for their aphid hosts. Most aphids from the Lachninae subfamily have been consistently found to house additional endosymbionts, mainlySerratia symbiotica. This apparent dependence on secondary endosymbionts was proposed to have been triggered by the loss of the riboflavin biosynthetic capability byBuchnerain the Lachninae last common ancestor. However, an integral large-scale analysis of secondary endosymbionts in the Lachninae is still missing, hampering the interpretation of the evolutionary and genomic analyses of these endosymbionts. Here, we anal…

0301 basic medicine0106 biological sciencesMost recent common ancestorSerratiaSubfamily[SDV]Life Sciences [q-bio]aphididaeinteraction hôte symbioteBiologyMicrobiology010603 evolutionary biology01 natural sciencesSerratia03 medical and health sciencesSymbiosisPhylogeneticsAnimalsbuchneraPhylogenyEcology Evolution Behavior and Systematics030304 developmental biology0303 health sciencesAphidObligatefungifood and beveragesbiochemical phenomena metabolism and nutritionbiology.organism_classificationbactérie endosymbiotiquesymbiosis030104 developmental biologyEvolutionary biologypuceronAphidsTissue tropismbacteriaBuchnerasymbioseBacteria
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Old and new symbiotic partners in lachnine aphids.

2016

The genome sequencing of Buchnera aphidicola BCc from the aphid Cinara cedri, which is the smallest known Buchnera genome, revealed that this bacterium had lost its symbiotic role, as it was not able to synthesize tryptophan and riboflavin. Moreover, the biosynthesis of tryptophan is shared with the endosymbiont Serratia symbiotica SCc, which coexists with B. aphidicola in this aphid. The whole-genome sequencing of S. symbiotica SCc reveals an endosymbiont in a stage of genome reduction that is closer to an obligate endosymbiont, such as B. aphidicola from Acyrthosiphon pisum, than to another S. symbiotica, which is a facultative endosymbiont in this aphid, and presents much less gene decay…

0301 basic medicineEvolutionary BiologySystems BiologyMEDLINEComputational biologyGenomicsBiologybiology.organism_classificationMicrobiology03 medical and health sciences030104 developmental biologySymbiosisBuchneraAphidsAnimalsBuchneraSymbiosisBiologyEcology Evolution Behavior and SystematicsResearch ArticleEnvironmental microbiology
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Determination of melatonin in Acyrthosiphon pisum aphids by liquid chromatography-tandem mass spectrometry.

2015

Melatonin is a hormone mainly involved in the regulation of circadian and seasonal rhythms in both invertebrates and vertebrates. Despite the identification of melatonin in many insects, its involvement in the insect seasonal response remains unclear. A liquid chromatography tandem mass spectrometry (LC-MS/MS) method has been developed for melatonin analysis in aphids (Acyrthosiphon pisum) for the first time. After comparing two different procedures and five extraction solvents, a sample preparation procedure with a mixture of methanol/water (50:50) was selected for melatonin extraction. The method was validated by analyzing melatonin recovery at three spiked concentrations (5, 50 and 100 p…

0301 basic medicinePhysiologyTandem mass spectrometry01 natural sciencesMelatonin03 medical and health sciencesLiquid chromatography–mass spectrometryTandem Mass SpectrometryBotanymedicineAnimalsSample preparationMelatoninDetection limitChromatographybiology010401 analytical chemistryExtraction (chemistry)Repeatabilitybiology.organism_classification0104 chemical sciencesAcyrthosiphon pisum030104 developmental biologyInsect ScienceAphidsFemalemedicine.drugChromatography LiquidJournal of insect physiology
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Reinventing the Wheel and Making It Round Again: Evolutionary Convergence in Buchnera-Serratia Symbiotic Consortia between the Distantly Related Lach…

2016

International audience; Virtually all aphids (Aphididae) harbor Buchnera aphidicola as an obligate endosymbiont to compensate nutritional deficiencies arising from their phloem diet. Many species within the Lachninae subfamily seem to be consistently associated also with Serratia symbiotica We have previously shown that both Cinara (Cinara) cedri and Cinara (Cupressobium) tujafilina (Lachninae: Eulachnini tribe) have indeed established co-obligate associations with both Buchnera and S. symbiotica However, while Buchnera genomes of both Cinara species are similar, genome degradation differs greatly between the two S. symbiotica strains. To gain insight into the essentiality and degree of int…

0301 basic medicineSerratiaLachninaeBiodiversité et EcologieGenomeaphid endosymbiontBiodiversity and EcologyEvolution Molecular03 medical and health sciencesBuchneraPhylogeneticsRNA Ribosomal 16SBotanyGeneticsAnimalsSymbiosisPhylogenyEcology Evolution Behavior and SystematicsBuchnera aphidicola;Lachninae;Serratia symbiotica;aphid endosymbiont;co-obligate;symbiont settlementGeneticssymbiont settlementAphidbiologyObligategénomefood and beveragesbuchnera aphidicolaAphididaeSequence Analysis DNASerratia symbioticabiochemical phenomena metabolism and nutritionbiology.organism_classificationbactérie endosymbiotiqueTuberolachnus salignussymbiont030104 developmental biologypuceronAphidsCinaraévolution génomique[SDE.BE]Environmental Sciences/Biodiversity and EcologyBuchneraco-obligateGenome BacterialResearch Article
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Characterisation, analysis of expression and localisation of circadian clock genes from the perspective of photoperiodism in the aphid Acyrthosiphon …

2017

Aphids are typical photoperiodic insects that switch from viviparous parthenogenetic reproduction typical of long day seasons to oviparous sexual reproduction triggered by the shortening of photoperiod in autumn yielding an overwintering egg in which an embryonic diapause takes place. While the involvement of the circadian clock genes in photoperiodism in mammals is well established, there is still some controversy on their participation in insects. The availability of the genome of the pea aphid Acyrthosiphon pisum places this species as an excellent model to investigate the involvement of the circadian system in the aphid seasonal response. In the present report, we have advanced in the c…

0301 basic medicineTimelessPeriod (gene)PhotoperiodCircadian clockDiapauseBiochemistry03 medical and health sciences0302 clinical medicineCircadian ClocksBotanyAnimalsCircadian rhythmMolecular Biologyphotoperiodismbiologyfood and beveragesBrainPeriod Circadian Proteinsbiology.organism_classificationAcyrthosiphon pisumCell biologyCLOCK030104 developmental biologyGene Expression RegulationInsect ScienceAphids030217 neurology & neurosurgeryInsect biochemistry and molecular biology
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Host-based divergence in populations of the pea aphid: insights from nuclear markers and the prevalence of facultative symbionts.

2003

In North America, the pea aphid Acyrthosiphon pisum encompasses ecologically and genetically distinct host races that offer an ideal biological system for studies on sympatric speciation. In addition to its obligate symbiont Buchnera, pea aphids harbour several facultative and phylogenetically distant symbionts. We explored the relationships between host races of A. pisum and their symbiotic microbiota to gain insights into the historical process of ecological specialization and symbiotic acquisition in this aphid. We used allozyme and microsatellite markers to analyse the extent of genetic differentiation between populations of A. pisum on pea, alfalfa and clover in France. In parallel, we…

Adaptation BiologicalHamiltonella defensaGeneral Biochemistry Genetics and Molecular BiologyBuchneraGene FrequencyAnimalsSelection GeneticSymbiosisEcosystemPhylogenyGeneral Environmental ScienceDNA PrimersFacultativeAphidGeneral Immunology and MicrobiologybiologyHost (biology)Ecologyfood and beveragesFabaceaeGeneral MedicineSequence Analysis DNAbiochemical phenomena metabolism and nutritionbiology.organism_classificationAcyrthosiphon pisumSympatric speciationEvolutionary biologyAphidsFranceGeneral Agricultural and Biological SciencesBuchneraSymbiotic bacteriaMicrosatellite RepeatsResearch ArticleProceedings. Biological sciences
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Large-scale gene discovery in the pea aphid Acyrthosiphon pisum (Hemiptera)

2006

A large-scale sequencing analysis of the Hemiptera Acyrthosiphon pisumexpressed sequence tags corresponding to about 12,000 unique transcripts is described, along with an in silico profiling analysis that identifies 135 aphid tissue-specific transcripts.

Aphid SpeciesDNA ComplementaryTranscription GeneticMethodacyrthosiphon pisumAdditional Data FileséquençageAnimals[SDV.BV]Life Sciences [q-bio]/Vegetal BiologyPhylogenyCodon PositionGene LibraryPlant DiseasesExpressed Sequence TagsPopulation DensityBase CompositionBase SequencegènefungiPeasfood and beveragesDNAbiochemical phenomena metabolism and nutrition[SDV.BIBS]Life Sciences [q-bio]/Quantitative Methods [q-bio.QM]Gene OntologycDNA LibrarypuceronAphids[INFO.INFO-BI]Computer Science [cs]/Bioinformatics [q-bio.QM]Microsatellite Repeats
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