Search results for "Applied Mathematics"

showing 10 items of 4379 documents

A tribute to Massimo Lanza de Cristoforis

2020

It is with great pleasure that we dedicate the special issue Functional Analytic Methods in Partial Differential Equations of Complex Variables and Elliptic Equations to the 60th birthday of Massim...

A tribute to Lanza de CristoforisNumerical AnalysisPartial differential equationApplied Mathematicsmedia_common.quotation_subject010102 general mathematicsSettore MAT/04 - Matematiche Complementari01 natural sciencesPhysics::History of PhysicsPleasure010101 applied mathematicsAlgebraComputational MathematicsH. BegehrSettore MAT/05 - Analisi MatematicaComplex variables0101 mathematicsAnalysisMathematicsmedia_common
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An improvement of ComiR algorithm for microRNA target prediction by exploiting coding region sequences of mRNAs

2020

AbstractMicroRNA are small non-coding RNAs that post-transcriptionally regulate the expression levels of messenger RNAs. MicroRNA regulation activity depends on the recognition of binding sites located on mRNA molecules. ComiR is a web tool realized to predict the targets of a set of microRNAs, starting from their expression profile. ComiR was trained with the information regarding binding sites in the 3’utr region, by using a reliable dataset containing the targets of endogenously expressed microRNA in D. melanogaster S2 cells. This dataset was obtained by comparing the results from two different experimental approaches, i.e., inhibition, and immunoprecipitation of the AGO1 protein--a comp…

AGO1ImmunoprecipitationComputer sciencelcsh:Computer applications to medicine. Medical informaticsBiochemistryOpen Reading Frames03 medical and health sciences0302 clinical medicineStructural BiologymicroRNAMelanogasterAnimalsHumansCoding regionGene silencing3'UTRRNA MessengerBinding sitelcsh:QH301-705.5Molecular Biology030304 developmental biology0303 health sciencesMessenger RNAbiologyThree prime untranslated regionResearchApplied MathematicsmicroRNA target predictionbiology.organism_classificationComputer Science Applications3’UTRMicroRNAsDrosophila melanogasterlcsh:Biology (General)Coding regionlcsh:R858-859.7DNA microarrayDrosophila melanogasterAlgorithmAlgorithms030217 neurology & neurosurgeryBMC Bioinformatics
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Abel transforms with low regularity with applications to X-ray tomography on spherically symmetric manifolds

2017

We study ray transforms on spherically symmetric manifolds with a piecewise $C^{1,1}$ metric. Assuming the Herglotz condition, the X-ray transform is injective on the space of $L^2$ functions on such manifolds. We also prove injectivity results for broken ray transforms (with and without periodicity) on such manifolds with a $C^{1,1}$ metric. To make these problems tractable in low regularity, we introduce and study a class of generalized Abel transforms and study their properties. This low regularity setting is relevant for geophysical applications.

Abel transformsMathematics - Differential GeometryClass (set theory)Pure mathematicsApplied Mathematics010102 general mathematicsgeodesic x-ray tomographySpace (mathematics)01 natural sciencesInjective functionComputer Science ApplicationsTheoretical Computer Science010101 applied mathematicsDifferential Geometry (math.DG)geophysical imagingBroken ray tomographySignal ProcessingMetric (mathematics)PiecewiseFOS: MathematicsTomography0101 mathematicsspherical symmetryMathematical PhysicsMathematics
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Indefinite integrals involving the incomplete elliptic integrals of the first and second kinds

2016

ABSTRACTA substantial number of indefinite integrals are presented for the incomplete elliptic integrals of the first and second kinds. The number of new results presented is about three times the total number to be found in the current literature. These integrals were obtained with a Lagrangian method based on the differential equations which these functions obey. All results have been checked numerically with Mathematica. Similar results for the incomplete elliptic integral of the third kind will be presented separately.

Abelian integralCarlson symmetric formQuarter periodApplied Mathematics010102 general mathematicsMathematical analysisTrigonometric integral010103 numerical & computational mathematics01 natural sciencesJacobi elliptic functionsLegendre formSlater integralsElliptic integral0101 mathematicsAnalysisMathematicsIntegral Transforms and Special Functions
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Indefinite integrals involving the incomplete elliptic integral of the third kind

2016

ABSTRACTA substantial number of new indefinite integrals involving the incomplete elliptic integral of the third kind are presented, together with a few integrals for the other two kinds of incomplete elliptic integral. These have been derived using a Lagrangian method which is based on the differential equations which these functions satisfy. Techniques for obtaining new integrals are discussed, together with transformations of the governing differential equations. Integrals involving products combining elliptic integrals of different kinds are also presented.

Abelian integralCarlson symmetric formQuarter periodApplied MathematicsMultiple integral010102 general mathematicsMathematical analysisTrigonometric integral010103 numerical & computational mathematics01 natural sciencesJacobi elliptic functionsVolume integralLegendre formApplied mathematics0101 mathematicsAnalysisMathematicsIntegral Transforms and Special Functions
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A note on a generalization of Françoise's algorithm for calculating higher order Melnikov functions

2004

In [J. Differential Equations 146 (2) (1998) 320–335], Françoise gives an algorithm for calculating the first nonvanishing Melnikov function M of a small polynomial perturbation of a Hamiltonian vector field and shows that M is given by an Abelian integral. This is done under the condition that vanishing of an Abelian integral of any polynomial form ω on the family of cycles implies that the form is algebraically relatively exact. We study here a simple example where Françoise’s condition is not verified. We generalize Françoise’s algorithm to this case and we show that M belongs to the C[log t, t, 1/t] module above the Abelian integrals. We also establish the linear differential system ver…

Abelian integralMathematics(all)GeneralizationGeneral MathematicsHomotopyMathematical analysisApplied mathematicsOrder (group theory)Abelian integral; Melnikov function; Limit cycle; Fuchs systemMelnikov methodMathematics
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A note on higher order Melnikov functions

2005

We present several classes of planar polynomial Hamilton systems and their polynomial perturbations leading to vanishing of the first Melnikov integral. We discuss the form of higher order Melnikov integrals. In particular, we present new examples where the second order Melnikov integral is not an Abelian integral.

Abelian integralPolynomialPure mathematicsMathematics::Dynamical SystemsApplied MathematicsMathematical analysisMathematics::Classical Analysis and ODEsPhysics::Fluid DynamicsNonlinear Sciences::Chaotic DynamicsPlanarDiscrete Mathematics and CombinatoricsOrder (group theory)Nonlinear Sciences::Pattern Formation and SolitonsMathematicsQualitative Theory of Dynamical Systems
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Abelian integrals and limit cycles

2006

Abstract The paper deals with generic perturbations from a Hamiltonian planar vector field and more precisely with the number and bifurcation pattern of the limit cycles. In this paper we show that near a 2-saddle cycle, the number of limit cycles produced in unfoldings with one unbroken connection, can exceed the number of zeros of the related Abelian integral, even if the latter represents a stable elementary catastrophe. We however also show that in general, finite codimension of the Abelian integral leads to a finite upper bound on the local cyclicity. In the treatment, we introduce the notion of simple asymptotic scale deformation.

Abelian integralPure mathematicsApplied MathematicsMathematical analysisAbelian integralTwo-saddle cyclePlanar vector fieldsAsymptotic scale deformationCodimensionLimit cycleUpper and lower boundsPlanar vector fieldsymbols.namesakeLimit cyclesymbolsHamiltonian perturbationAbelian groupHamiltonian (quantum mechanics)BifurcationAnalysisMathematicsJournal of Differential Equations
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Principal Poincar\'e Pontryagin Function associated to some families of Morse real polynomials

2014

It is known that the Principal Poincar\'e Pontryagin Function is generically an Abelian integral. We give a sufficient condition on monodromy to ensure that it is an Abelian integral also in non generic cases. In non generic cases it is an iterated integral. Uribe [17, 18] gives in a special case a precise description of the Principal Poincar\'e Pontryagin Function, an iterated integral of length at most 2, involving logarithmic functions with only one ramification at a point at infinity. We extend this result to some non isodromic families of real Morse polynomials.

Abelian integralPure mathematicsLogarithmApplied Mathematics34M35 34C08 14D05General Physics and AstronomyStatistical and Nonlinear PhysicsMorse codelaw.inventionPontryagin's minimum principlesymbols.namesakeMonodromylawPoincaré conjecturesymbolsPoint at infinitySpecial caseMathematics - Dynamical SystemsMathematical PhysicsMathematics
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Automorphisms of hyperelliptic GAG-codes

2009

Abstract We determine the n –automorphism group of generalized algebraic-geometry codes associated with rational, elliptic and hyperelliptic function fields. Such group is, up to isomorphism, a subgroup of the automorphism group of the underlying function field.

Abelian varietyDiscrete mathematicsautomorphismsGroup (mathematics)Applied Mathematicsgeneralized algebraic geometry codes.Outer automorphism groupReductive groupAutomorphismTheoretical Computer ScienceCombinatoricsMathematics::Group Theorygeometric Goppa codeAlgebraic groupDiscrete Mathematics and Combinatoricsalgebraic function fieldsSettore MAT/03 - GeometriaIsomorphismfinite fieldsGeometric Goppa codesfinite fieldalgebraic function fieldHyperelliptic curvegeneralized algebraic-geometry codesMathematicsDiscrete Mathematics
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