Search results for "Arabidopsi"

showing 10 items of 241 documents

Function of AtPGAP1 in GPI anchor lipid remodeling and transport to the cell surface of GPI-anchored proteins

2021

ABSTRACTGPI-anchored proteins (GPI-APs) play an important role in a variety of plant biological processes including growth, stress response, morphogenesis, signalling and cell wall biosynthesis. The GPI-anchor contains a lipid-linked glycan backbone that is synthesized in the endoplasmic reticulum (ER) where it is subsequently transferred to the C-terminus of proteins containing a GPI signal peptide by a GPI transamidase. Once the GPI anchor is attached to the protein, the glycan and lipid moieties are remodelled. In mammals and yeast, this remodelling is required for GPI-APs to be included in Coat Protein II (COPII) coated vesicles for their ER export and subsequent transport to the cell s…

Signal peptideGlycanbiologyChemistryEndoplasmic reticulumCellCoated vesiclebiology.organism_classificationCell biologycarbohydrates (lipids)chemistry.chemical_compoundmedicine.anatomical_structureArabidopsismedicinebiology.proteinlipids (amino acids peptides and proteins)InositolCOPII
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The evolutionary history of the Arabidopsis arenosa complex: diverse tetraploids mask the Western Carpathian center of species and genetic diversity.

2012

The Arabidopsis arenosa complex is closely related to the model plant Arabidopsis thaliana. Species and subspecies in the complex are mainly biennial, predominantly outcrossing, herbaceous, and with a distribution range covering most parts of latitudes and the eastern reaches of Europe. In this study we present the first comprehensive evolutionary history of the A. arenosa species complex, covering its natural range, by using chromosome counts, nuclear AFLP data, and a maternally inherited marker from the chloroplast genome [trnL intron (trnL) and trnL/F intergenic spacer (trnL/F-IGS) of tRNA(Leu) and tRNA(Phe), respectively]. We unravel the broad-scale cytogeographic and phylogeographic pa…

Species complexAngiospermsPlant EvolutionScienceArabidopsisPopulation geneticsOutcrossingPlant ScienceSubspeciesPlant GeneticsChromosomes PlantArabidopsis arenosaSpecies SpecificityBotanyIce CoverEvolutionary SystematicsAmplified Fragment Length Polymorphism AnalysisBiologyTaxonomyEcotypeGenetic diversityPrincipal Component AnalysisEvolutionary BiologyMultidisciplinaryEcotypebiologyBase SequenceGeographyQRDNA ChloroplastGenetic VariationComputational BiologyPlant TaxonomyPlantsbiology.organism_classificationBiological EvolutionDiploidyEuropeTetraploidyPhylogeographyddc:580HaplotypesBiogeographyEarth SciencesMedicinePopulation GeneticsResearch ArticlePloS one
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Identification of N- and C-terminal Amino Acids of Lhca1 and Lhca4 Required for Formation of the Heterodimeric Peripheral Photosystem I Antenna LHCI-…

2002

Apoproteins of higher plant light-harvesting complexes (LHC) share considerable amino acid sequence identity/similarity. Despite this fact, they occur in different oligomeric states (i.e., monomeric, dimeric, and trimeric). As a step toward understanding the underlying structure requirements for different oligomerization behavior, we analyzed whether amino acids at the N- and C-termini of Lhca1 and Lhca4 are involved in the formation of the heterodimeric LHCI-730. Using altered proteins produced by deletion or site-directed mutagenesis for reconstitution, we were able to identify amino acids required for the assembly of LHCI-730. At the N-terminus of Lhca1, W4 is involved in heterodimerizat…

StereochemistryDimerPhotosynthetic Reaction Center Complex ProteinsMutantLight-Harvesting Protein ComplexesBiologyPhotosystem IBiochemistrychemistry.chemical_compoundResidue (chemistry)Point MutationAmino AcidsPeptide sequencePlant ProteinsSequence Deletionchemistry.chemical_classificationPhotosystem I Protein ComplexArabidopsis ProteinsMutagenesisRecombinant ProteinsAmino acidMonomerBiochemistrychemistryChlorophyll Binding ProteinsDimerizationBiochemistry
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Pigment organization and energy transfer dynamics in isolated photosystem I (PSI) complexes from Arabidopsis thaliana depleted of the PSI-G, PSI-K, P…

2002

Abstract Green plant photosystem I (PSI) consists of at least 18 different protein subunits. The roles of some of these protein subunits are not well known, in particular those that do not occur in the well characterized PSI complexes from cyanobacteria. We investigated the spectroscopic properties and excited-state dynamics of isolated PSI-200 particles from wild-type and mutant Arabidopsis thaliana plants devoid of the PSI-G, PSI-K, PSI-L, or PSI-N subunit. Pigment analysis and a comparison of the 5K absorption spectra of the various particles suggests that the PSI-L and PSI-H subunits together bind approximately five chlorophyll a molecules with absorption maxima near 688 and 667nm, that…

Time FactorsAbsorption spectroscopyProtein subunitPhotosynthetic Reaction Center Complex ProteinsArabidopsisLight-Harvesting Protein ComplexesBiophysicsBiologyPhotosystem Ichemistry.chemical_compoundPhase (matter)MoleculePlant ProteinsQuantitative Biology::BiomoleculesPhotosystem I Protein ComplexTemperaturePigments Biologicalbeta CaroteneFluorescenceKineticsCrystallographySpectrometry FluorescenceEnergy TransferchemistryChlorophyllThermodynamicsHigh Energy Physics::ExperimentAbsorption (chemistry)Research Article
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Perturbation of spermine synthase Gene Expression and Transcript Profiling Provide New Insights on the Role of the Tetraamine Spermine in Arabidopsis…

2011

The role of the tetraamine spermine in plant defense against pathogens was investigated by using the Arabidopsis (Arabidopsis thaliana)-Pseudomonas viridiflava pathosystem. The effects of perturbations of plant spermine levels on susceptibility to bacterial infection were evaluated in transgenic plants (35S::spermine synthase [SPMS]) that overexpressed the SPMS gene and accumulated spermine, as well as in spms mutants with low spermine levels. The former exhibited higher resistance to P. viridiflava than wild-type plants, while the latter were more susceptible. Exogenous supply of spermine to wild-type plants also increased disease resistance. Increased resistance provided by spermine was p…

Time FactorsTranscription GeneticGene Expression ProfilingSpermine SynthaseArabidopsisColony Count MicrobialGenes PlantPlants Genetically ModifiedGene Expression Regulation EnzymologicGene Expression Regulation PlantPseudomonasMutationPlants Interacting with Other OrganismsSpermineRNA MessengerReactive Oxygen SpeciesOxidation-Reduction
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The Arabidopsis Copper Transporter COPT1 Functions in Root Elongation and Pollen Development

2004

Copper plays a dual role in aerobic organisms, as both an essential and a potentially toxic element. To ensure copper availability while avoiding its toxic effects, organisms have developed complex homeostatic networks to control copper uptake, distribution, and utilization. In eukaryotes, including yeasts and mammals, high affinity copper uptake is mediated by the Ctr family of copper transporters. This work is the first report on the physiological function of copper transport in Arabidopsis thaliana. We have studied the expression pattern of COPT1 in transgenic plants expressing a reporter gene under the control of the COPT1 promoter. The reporter gene is highly expressed in embryos, tric…

TransgeneArabidopsisDown-Regulationchemistry.chemical_elementPlant RootsBiochemistrychemistry.chemical_compoundGenes ReporterArabidopsisArabidopsis thalianaRNA MessengerTransgenesMolecular BiologyCopper Transporter 1Reporter geneDose-Response Relationship DrugbiologyArabidopsis ProteinsReverse Transcriptase Polymerase Chain ReactionMembrane Transport ProteinsBiological TransportTransporterCell BiologyOligonucleotides AntisensePlants Genetically Modifiedbiology.organism_classificationCopperTrichomeUp-RegulationBiochemistrychemistryMicroscopy Electron ScanningPollenGrowth inhibitionCopperPhenanthrolinesPlasmidsJournal of Biological Chemistry
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Structural and evolutionary analysis of the copia-like elements in the Arabidopsis thaliana genome.

2001

The analysis of 460 kb of genomic sequence of Arabidopsis thaliana chromosome III allowed us to identify two new transposable elements named AtC1 and AtC2. AtC1 shows identical long terminal repeats (LTRs) and all the structural features characteristic of the copia-like active elements. AtC2 is also a full copia-like element, but a putative stop codon in the open reading frame (ORF) would produce a truncated protein. In order to identify the copia-like fraction of the A. thaliana genome, a careful computer-based analysis of the available sequences (which correspond to 92% of the genome) was performed. Approximately 300 nonredundant copia-like sequences homologous to AtC1 and AtC2 were detec…

Transposable elementDatabases FactualArabidopsisSequence HomologyRetrotransposonBiologyGenomeEvolution MolecularMagnoliopsidaOpen Reading FramesGeneticsArabidopsis thalianaAmino Acid SequenceMolecular BiologyEcology Evolution Behavior and SystematicsPhylogenyExpressed Sequence TagsPhylogenetic treeModels GeneticfungiTerminal Repeat SequencesSequence Analysis DNAModels Theoreticalbiology.organism_classificationStop codonLong terminal repeatOpen reading frameGenesEvolutionary biologyDNA Transposable ElementsSequence AlignmentGenome PlantSoftwareMolecular biology and evolution
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Characterization and role of nitric oxide production in Arabidopsis thaliana defense responses induced by oligogalacturonides

2011

Nitric oxide (NO) regulates a wide range of plant processes from development toenvironmental adaptation. In this study, NO production and its effects were investigated in aplant-pathogen context. The production of NO following Arabidopsis treatment witholigogalacturonides (OGs), an endogenous elicitor of plant defense, was assessed using the NOsensitive probe 4, 5-diamino fluorescein diacetate. Pharmacological and genetic approaches wereused to analyze NO enzymatic sources and its role in the Arabidopsis thaliana /Botrytis cinereainteraction. We showed that NO production involves both a L-arginine- and a nitrate reductase(NR)-pathways. OGs-induced NO production was Ca2+-dependent and modula…

[SDV.SA] Life Sciences [q-bio]/Agricultural sciencesArabidopsis thalianaMonoxyde d’azoteNitrate réductaseArabidopsisNitric oxideOligogalacturonidesBotrytis cinereaPlant defenseRéactions de défenses des plantesCalcium[SDV.BV] Life Sciences [q-bio]/Vegetal BiologyTranscriptomeReactive oxygen speciesFormes activées de l’oxygèneNitrate reductase
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Des canaux Ioniques de la membrane plasmique lors de la mort cellulaire programmée induite par l’ozone chez A. thaliana

2011

Tropospheric ozone is a major secondary pollutant. In addition to its role in greenhouse effect gas, ozone is one of the most toxic air pollutants, and its pollution affects both human health and crop productivity. The work presented in this thesis concerns the role of ion channels in the plasma membrane in response to acute exposure to ozone and their interactions with signaling events leading to O3-induced PCD in A. Thaliana cultured cells. We have shown that cell death was genetically controlled and characterized by cell shrinkage similar to the mechanism of "Apoptosis Volume Decrease" (AVD) described in animal. This process is initially promoted by an early activation of a plasma membra…

[SDV.SA]Life Sciences [q-bio]/Agricultural sciences[SDV.SA] Life Sciences [q-bio]/Agricultural sciencesCanaux ioniquesOzoneArabidopsis thalianaSignalisation cellulaireIon channelsCalciumROSMort cellulaire programméeProgrammed cell deathCell signalling
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Calcium signaling in plant defense: involvement of subcellular compartments and glutamate receptorsCalcium signaling in plant defense: involvement of…

2012

[SDV] Life Sciences [q-bio][SDE] Environmental SciencesCalcium signaling Cryptogein oligogalacturonides mitochondria chloroplasts glutamate receptors Hyaloperonospora arabidopsidis Arabidopsis thaliana Nicotiana tabacumthese
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