Search results for "Array"

showing 10 items of 1264 documents

Liver-specific Ldb1 deletion results in enhanced liver cancer development.

2009

Background & Aims LIM-domain-binding (Ldb) proteins have been demonstrated to be essential not only to key embryonic developmental processes but also to carcinogenesis. We have previously demonstrated Ldb1 to be of high biological and developmental relevance, as a targeted deletion of the Ldb1 gene in mice results in an embryonic lethal and pleiotropic phenotype. Methods We have now established a liver-specific Ldb1 knock out to investigate the role of Ldb1 in carcinogenesis, in particular in hepatocellular carcinoma (HCC) development, in vivo . Results These mice demonstrated a significantly enhanced growth of liver cancer by means of tumor size and number, advocating for an essential role…

Liver Stem CellApoptosisMice TransgenicBiologymedicine.disease_causeArticleMiceCyclin D1Liver Neoplasms ExperimentalmedicineAnimalsRNA MessengerRNA NeoplasmOligonucleotide Array Sequence AnalysisMice KnockoutHepatologyOncogeneBase SequenceMicroarray analysis techniquesCancerLIM Domain Proteinsmedicine.diseaseDNA-Binding ProteinsMice Inbred C57BLLiverImmunologyKnockout mouseCancer researchLiver cancerCarcinogenesisJournal of hepatology
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A Simultaneous Observation of Lightning by ASIM, Colombia-Lightning Mapping Array, GLM, and ISS-LIS

2021

The Atmosphere-Space Interactions Monitor (ASIM) on the International Space Station (ISS) provides optical radiances and images of lightning flashes in several spectral bands. This work presents a lightning flash simultaneously observed from space by ASIM, the Geostationary Lightning Mapper (GLM) and the Lightning Imaging Sensor on the International Space Station (ISS-LIS); and from ground by the Colombia-Lightning Mapping Array (Colombia-LMA). Volumetric weather radar provides reflectivity data to help to interpret the effects of the cloud particles on the observed optical features. We found that surges in radiance in the band at 777.4 nm appear to be related mostly with lightning processe…

Location dataGeostationary lightning mapper lightningAtmospheric ScienceRadarmeteorologia:Enginyeria elèctrica [Àrees temàtiques de la UPC]Atmosphere-space interactions monitorEuropean Regional Development FundLibrary scienceLightningLightninglaw.inventionLightning mapping array thunderstormGeophysicsGeographyRadar meteorologySpace and Planetary SciencelawEarth and Planetary Sciences (miscellaneous)ThunderstormChristian ministryWeather radarTempestesLlamps
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Performance and Implementation Modeling of Gated Linear Networks on FPGA for Lossless Image Compression

2020

Over recent years, imaging systems have seen explosive increase in resolution. These trends present a challenge for resource-constrained embedded imaging devices. Efficient image compression is essential to reduce bandwidth consumption and to increase the capability of on-board storage. Especially, for imaging systems where information loss is not allowed, for example, in medical, military and remote sensing imaging systems. This paper explores the use of Gated Linear Networks (GLNs) for development of embedded lossless compression systems. GLNs have proved themselves via PAQ archiver series, that have been ranked among the top across several lossless compression benchmarks. We propose an a…

Lossless compressionbusiness.industryComputer scienceEmphasis (telecommunications)02 engineering and technologyInformation loss020202 computer hardware & architecture020204 information systemsScalability0202 electrical engineering electronic engineering information engineeringBandwidth (computing)businessField-programmable gate arrayThroughput (business)Computer hardwareImage compression2020 9th Mediterranean Conference on Embedded Computing (MECO)
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Transcription factor NRF2 regulates miR-1 and miR-206 to drive tumorigenesis

2013

The mechanisms by which deregulated nuclear factor erythroid-2–related factor 2 (NRF2) and kelch-like ECH-associated protein 1 (KEAP1) signaling promote cellular proliferation and tumorigenesis are poorly understood. Using an integrated genomics and 13C-based targeted tracer fate association (TTFA) study, we found that NRF2 regulates miR-1 and miR-206 to direct carbon flux toward the pentose phosphate pathway (PPP) and the tricarboxylic acid (TCA) cycle, reprogramming glucose metabolism. Sustained activation of NRF2 signaling in cancer cells attenuated miR-1 and miR-206 expression, leading to enhanced expression of PPP genes. Conversely, overexpression of miR-1 and miR-206 decreased the exp…

Lung NeoplasmsCell SurvivalNF-E2-Related Factor 2Citric Acid CycleMice NudeBiologymedicine.disease_causeMiceRNA interferenceCarcinoma Non-Small-Cell LungCell Line TumormicroRNAGene expressionmedicineAnimalsHumansTranscription factor3' Untranslated RegionsCell ProliferationOligonucleotide Array Sequence AnalysisRegulation of gene expressionBinding SitesBase SequenceGeneral MedicineMolecular biologyHDAC4Cell biologyTumor BurdenGene Expression Regulation NeoplasticMicroRNAsCell Transformation NeoplasticGlucoseRNA InterferenceHistone deacetylaseCarcinogenesisTranscriptomeOxidation-ReductionNeoplasm TransplantationResearch Article
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Pushing the Limit – MRI of the Lung Using Hyperpolarized 3-Helium in Conjunction with Parallel Imaging

2009

Imaging of the lung with hyperpolarized 3He became a well known technique in the last decade. Being able to image ventilation and the microstructure of the lung an increase of SNR and a shortage of scan time is eligible. By using a 32-channel phased array the sensitivity was increased dramatically. High resolution 2D-images with a resolution of 1 × 1 mm2 having a 3 mm slice was realized, showing highly detailed images of the lung. By applying parallel imaging techniques the SNR could be increased and scan time was reduced drastically by using a 2D acceleration of R = 4 × 2 with a 3D-protocol covering the whole lung.

LungMaterials sciencePhased arrayResolution (electron density)chemistry.chemical_elementHigh resolutionScan timeAccelerationmedicine.anatomical_structureNuclear magnetic resonancechemistrymedicineParallel imagingHelium
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FPGA Implementation Of Diffusive Realization For A Distributed Control Operator

2010

International audience; We focus on the question of real-time computation for optimal distributed filtering or control applicable to MEMS Arrays. We present an algorithm for the realization of a linear operator solution to a functional equation through its application to a Lyapunov operatorial equation associated to the heat equation in one dimension. It is based on the diffusive realization, and turns to be well suited for fined grained parallel computer architecture as Field Programmable Gate Arrays (FPGA). An effective FPGA implementation has been successfully carried out. Here, we report the main implementation steps and the final measured performances.

Lyapunov function[ INFO.INFO-MO ] Computer Science [cs]/Modeling and SimulationComputer scienceComputation[ INFO.INFO-CR ] Computer Science [cs]/Cryptography and Security [cs.CR]010103 numerical & computational mathematics02 engineering and technology01 natural sciencesComputational sciencesymbols.namesakeComputer Science::Hardware Architecture[INFO.INFO-CR]Computer Science [cs]/Cryptography and Security [cs.CR]Operator (computer programming)[ INFO.INFO-DC ] Computer Science [cs]/Distributed Parallel and Cluster Computing [cs.DC]Functional equation[INFO.INFO-DC] Computer Science [cs]/Distributed Parallel and Cluster Computing [cs.DC]0202 electrical engineering electronic engineering information engineeringElectronic engineering0101 mathematicsField-programmable gate array[INFO.INFO-CR] Computer Science [cs]/Cryptography and Security [cs.CR]020208 electrical & electronic engineeringOptimal control[INFO.INFO-MO]Computer Science [cs]/Modeling and SimulationsymbolsHeat equation[INFO.INFO-MO] Computer Science [cs]/Modeling and Simulation[INFO.INFO-DC]Computer Science [cs]/Distributed Parallel and Cluster Computing [cs.DC]Realization (systems)
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Evaluation and clinical analyses of downstream targets of the Akt inhibitor GDC-0068.

2013

Abstract Purpose: The oncogenic PI3K/Akt/mTOR pathway is an attractive therapeutic target in cancer. However, it is unknown whether the pathway blockade required for tumor growth inhibition is clinically achievable. Therefore, we conducted pharmacodynamic studies with GDC-0068, an ATP competitive, selective Akt1/2/3 inhibitor, in preclinical models and in patients treated with this compound. Experimental Design: We used a reverse phase protein array (RPPA) platform to identify a biomarker set indicative of Akt inhibition in cell lines and human-tumor xenografts, and correlated the degree of pathway inhibition with antitumor activity. Akt pathway activity was measured using this biomarker se…

MAPK/ERK pathwayCancer ResearchAKT1PharmacologyPiperazines03 medical and health sciencesMicePhosphatidylinositol 3-Kinases0302 clinical medicineIn vivoMedicineAnimalsHumansProtein kinase BProtein Kinase InhibitorsPI3K/AKT/mTOR pathway030304 developmental biology0303 health sciencesbusiness.industryTOR Serine-Threonine KinasesCancerReverse phase protein lysate microarraymedicine.diseaseXenograft Model Antitumor Assays3. Good healthOncogene Protein v-aktPyrimidinesOncology030220 oncology & carcinogenesisBiomarker (medicine)businessSignal TransductionClinical cancer research : an official journal of the American Association for Cancer Research
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Global Functional Analyses of Cellular Responses to Pore-Forming Toxins

2011

Here we present the first global functional analysis of cellular responses to pore-forming toxins (PFTs). PFTs are uniquely important bacterial virulence factors, comprising the single largest class of bacterial protein toxins and being important for the pathogenesis in humans of many Gram positive and Gram negative bacteria. Their mode of action is deceptively simple, poking holes in the plasma membrane of cells. The scattered studies to date of PFT-host cell interactions indicate a handful of genes are involved in cellular defenses to PFTs. How many genes are involved in cellular defenses against PFTs and how cellular defenses are coordinated are unknown. To address these questions, we pe…

MAPK/ERK pathwayTranscription GeneticImmunology/Innate ImmunityMessengerInteractomeInfectious Diseases/Bacterial InfectionsRNA interference2.1 Biological and endogenous factorsAetiologyBiology (General)Genes HelminthCaenorhabditis elegansOligonucleotide Array Sequence AnalysisGenetics0303 health sciencesGenomebiologyReverse Transcriptase Polymerase Chain ReactionGenetics and Genomics/Functional Genomics030302 biochemistry & molecular biologyrespiratory systemCell biologyInfectious DiseasesMedical MicrobiologyRNA InterferenceSignal transductionDNA microarrayTranscriptionBiotechnologyResearch ArticleSignal TransductionPore Forming Cytotoxic ProteinsQH301-705.5Virulence FactorsMAP Kinase Signaling System1.1 Normal biological development and functioningBacterial ToxinsImmunologyMicrobiologyDNA-binding proteinCell Line03 medical and health sciencesBacterial ProteinsGeneticUnderpinning researchVirologyEscherichia coliHelminthGeneticsAnimalsHumansRNA MessengerCaenorhabditis elegansCaenorhabditis elegans ProteinsMolecular BiologyGene030304 developmental biologyGenome HelminthCell MembraneGenetics and GenomicsRC581-607biology.organism_classificationrespiratory tract diseasesTranscription Factor AP-1Emerging Infectious DiseasesGenesRNAParasitologyGeneric health relevanceRNA HelminthImmunologic diseases. AllergyPLoS Pathogens
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Effects of Scrophularia ningpoensis Hemsl. on Inhibition of Proliferation, Apoptosis Induction and NF-κB Signaling of Immortalized and Cancer Cell Li…

2012

Scrophularia ningpoensis has been used in China for centuries as a herbal tea to treat various diseases. Based on the numerous animal studies on its pharmaceutical effects and the long time clinical experiences, we studied the molecular and cellular mechanism underlying the bioactivity of aqueous extract of Scrophularia and its isolated compounds. Seven isolated compounds, unlike Scrophularia extract, failed to induce cytotoxicity on HaCaT cells, but their combination improved the effect of extract. Tumor cell line selectivity was not observed, when we studied its cytotoxic effect on melanoma cell lines. The apoptotic and anti-inflammatory effects of Scrophularia extract have been demonstra…

MAPK/ERK pathwaypharmacognosylcsh:Medicinelcsh:RS1-441Pharmaceutical SciencePharmacologyapoptosis; microarrays; pharmacogenomics; pharmacognosy; phytotherapy; signaling pathwaysArticlelcsh:Pharmacy and materia medicaDrug DiscoveryMedicineScrophulariaCytotoxicitymicroarrayspharmacogenomicsScrophularia ningpoensisbiologybusiness.industrylcsh:Rapoptosisphytotherapybiology.organism_classificationsignaling pathwaysHaCaTMechanism of actionApoptosisMolecular MedicineSignal transductionmedicine.symptombusinessPharmaceuticals
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DNA nanofilm thickness measurement on microarray in air and in liquid using an atomic force microscope.

2005

International audience; The measurement of the thickness of DNA films on microarray as a function of the medium (liquid, air) is gaining importance for understanding the signal response of biosensors. Thiol group has been used to attach DNA strands to gold micropads deposited on silicon surface. Atomic force microscopy (AFM) was employed in its height mode to measure the change in the pad thickness and in its force mode to measure the indentation depth of the nanofilm. A good coherence between the height and force modes is observed for the film thickness in air. The adhesion force was found to be an alternative way to measure the surface coverage of the biolayer at nanoscopic scale. However…

MESH : Membranes ArtificialMESH: Materials TestingMESH : DNAMESH : Nucleic Acid ConformationAnalytical chemistryTissue Adhesions02 engineering and technologyMicroscopy Atomic Force01 natural sciencesCoated Materials BiocompatibleMESH: Coated Materials BiocompatibleIndentationMESH : Particle SizeMicroscopyMaterials TestingMESH : Coated Materials BiocompatibleElectrochemistryMESH : SolutionsMESH : Surface PropertiesComposite materialOligonucleotide Array Sequence AnalysisMESH: Microscopy Atomic ForceChemistryAirMESH: DNAGeneral Medicine021001 nanoscience & nanotechnologySolutionsMESH : Oligonucleotide Array Sequence AnalysisMembraneMESH: Nucleic Acid ConformationMESH : AirMESH: Membranes Artificial0210 nano-technologyBiotechnologySiliconSurface PropertiesBiomedical EngineeringBiophysicschemistry.chemical_elementMESH: Solutions010402 general chemistryMESH : Materials TestingAdsorptionMESH : Adsorption[SDV.BBM]Life Sciences [q-bio]/Biochemistry Molecular BiologyMESH: Particle SizeParticle SizeNanoscopic scale[ SDV.BBM ] Life Sciences [q-bio]/Biochemistry Molecular BiologyMESH: Surface PropertiesMembranes ArtificialDNAMESH : Microscopy Atomic Force0104 chemical sciencesMESH : Tissue AdhesionsMESH: AirMESH: Oligonucleotide Array Sequence AnalysisNucleic Acid ConformationParticle sizeAdsorptionMESH: Tissue AdhesionsMESH: AdsorptionBiosensor
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