Search results for "Arum"

showing 10 items of 354 documents

Iron-binding compounds and related outer membrane proteins in Vibrio cholerae non-O1 strains from aquatic environments

1990

A total of 156 strains of Vibrio cholerae non-O1 from aquatic origins were examined for the presence of iron uptake mechanisms and compared with O1 strains and other Vibrio species. All non-O1 strains were able to grow in iron-limiting conditions, with MICs of ethylenediaminedi (O-hydroxyphenylacetic acid) ranging from 20 microM to 2 mM. The production of siderophores was demonstrated by growth in chrome azurol S agar and cross-feeding assays. All strains produced phenolate-type compounds, as assessed by the chemical tests and by bioassays with Salmonella typhimurium enb-7. Some of the strains also promoted the growth of S. typhimurium enb-1 (which can use only enterobactin as a siderophore…

SiderophoreVibrio anguillarumChromatography PaperIronBiological Transport ActiveSiderophoresBiologymedicine.disease_causeIron Chelating AgentsApplied Microbiology and BiotechnologyMicrobiologychemistry.chemical_compoundEnterobactinVibrio cholerae non-O1VibrionaceaemedicineSerotypingEscherichia coliVibrio choleraeEcologybiology.organism_classificationchemistryBiochemistryVibrio choleraeSpectrophotometryVibriobactinWater MicrobiologyFood ScienceBiotechnologyBacterial Outer Membrane ProteinsResearch Article
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Data from: Population structure and reticulate evolution of Saccharomyces eubayanus and its lager-brewing hybrids

2014

Reticulate evolution can be a major driver of diversification into new niches, especially in disturbed habitats and at the edges of ranges. Industrial fermentation strains of yeast provide a window into these processes, but progress has been hampered by a limited understanding of the natural diversity and distribution of Saccharomyces species and populations. For example, lager beer is brewed with Saccharomyces pastorianus, an alloploid hybrid of S. cerevisiae and S. eubayanus, a species only recently discovered in Patagonia, Argentina. Here we report that genetically diverse strains of S. eubayanus are readily isolated from Patagonia, demonstrating that the species is well established ther…

SpeciationFungiPopulation Genetics - EmpiricalArgentinaLife SciencesMicrobial BiologySheboyganSaccharomyces bayanusSaccharomyces uvarummedicine and health carePhylogeographySaccharomycesWisconsinPatagoniaSaccharomyces eubayanusMedicineHybridizationhuman activitiesSaccharomyces pastorianus
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Supplementary material 1 from: Komonen A (2023) Nest characteristics and associates of Dolichovespula (Hymenoptera, Vespidae) in Central Finland. Jou…

2023

Nest characteristics

Sphecophaga vesparumAphomia sociellasocial waspsVespinaecolony structure
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Nest characteristics and associates of Dolichovespula (Hymenoptera, Vespidae) in Central Finland

2023

In social vespine wasps, the nest characteristics and associates vary intra- and interspecifically. I studied the nest characteristics and nest associates of three Dolichovespula wasp species in boreal Finland. The average number of combs and cells per nest was similar among D. media, D. saxonica and D. norwegica, and similar to Dolichovespula in the temperate zone. Most D. media and D. saxonica colonies produced both gynes and males, whereas D. norwegica produced mainly either one. The average colony lifespan of D. saxonica was a bit over two months, i.e. shorter than documented for Dolichovespula in the temperate zone. The proportion of nests parasitised by the ichneumonid wasp Sphecophag…

Sphecophaga vesparumInsectaArthropodaAphomia sociellaDolichovespulasocial waspspesätyhteiskuntahyönteisetBiotaHymenopteracolony structureVespidaeVespoidealoisetpesäloisintaInsect ScienceAnimaliaVespinaekoitampiaisetEcology Evolution Behavior and SystematicsJournal of Hymenoptera Research
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Misinterpretation risks of global stochastic optimisation of kinetic models revealed by multiple optimisation runs

2016

Abstract One of use cases for metabolic network optimisation of biotechnologically applied microorganisms is the in silico design of new strains with an improved distribution of metabolic fluxes. Global stochastic optimisation methods (genetic algorithms, evolutionary programing, particle swarm and others) can optimise complicated nonlinear kinetic models and are friendly for unexperienced user: they can return optimisation results with default method settings (population size, number of generations and others) and without adaptation of the model. Drawbacks of these methods (stochastic behaviour, undefined duration of optimisation, possible stagnation and no guaranty of reaching optima) cau…

Statistics and ProbabilitySucroseMathematical optimizationComputer scienceSystems biology0206 medical engineeringMetabolic network02 engineering and technologyModels BiologicalGeneral Biochemistry Genetics and Molecular Biology03 medical and health sciencesYeastsConvergence (routing)HomeostasisUse caseLimit (mathematics)030304 developmental biologyStochastic Processes0303 health sciencesGeneral Immunology and MicrobiologyApplied MathematicsParticle swarm optimizationGeneral MedicineEnzymesSaccharumConstraint (information theory)Nonlinear systemModeling and SimulationGeneral Agricultural and Biological SciencesMetabolic Networks and Pathways020602 bioinformaticsMathematical Biosciences
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Antimalarial activity of abietane ferruginol analogues possessing a phthalimide group.

2014

The abietane-type diterpenoid (+)-ferruginol, a bioactive compound isolated from New Zealand’s Miro tree (Podocarpus ferruginea), displays relevant pharmacological properties, including antimicrobial, cardioprotective, anti-oxidative, anti-plasmodial, leishmanicidal, anti-ulcerogenic, anti-inflammatory and anticancer. Herein, we demonstrate that ferruginol (1) and some phthalimide containing analogues 2–12 have potential antimalarial activity. The compounds were evaluated against malaria strains 3D7 and K1, and cytotoxicity was measured against a mammalian cell line panel. A promising lead, compound 3, showed potent activity with an EC50 = 86 nM (3D7 strain), 201 nM (K1 strain) and low cyto…

StereochemistryClinical BiochemistryPlasmodium falciparumPharmaceutical SciencePhthalimidesCHO CellsBiochemistryPhthalimidechemistry.chemical_compoundAntimalarialsCricetulusCricetinaeDrug DiscoveryAnimalsHumansCytotoxicityMolecular BiologyAbietaneChemistryPlant ExtractsOrganic ChemistryHep G2 CellsAntimicrobialTerpenoidBioactive compoundFerruginolAbietanesMolecular MedicineDiterpeneBioorganicmedicinal chemistry letters
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Synthesis and study of cytotoxic activity of 1,2,4-trioxane- and egonol-derived hybrid molecules against Plasmodium falciparum and multidrug-resistan…

2014

Abstract Malaria and cancer cause the death of millions of people every year. To combat these two diseases, it is important that new pharmaceutically active compounds have the ability to overcome multidrug resistance in cancer and Plasmodium falciparum strains. In search of effective anti-cancer and anti-malaria hybrids that possess improved properties compared to their parent compounds, a series of novel 1,2,4-trioxane-based hybrids incorporating egonol and/or ferrocene fragments were synthesized and tested in vitro against P. falciparum strains, CCRF–CEM cells and the multidrug-resistant P-glycoprotein-over-expressing CEM/ADR5000 cells. The most active compounds against P. falciparum stra…

StereochemistryMetallocenesPlasmodium falciparumAntineoplastic Agentschemistry.chemical_compoundAntimalarialsHeterocyclic CompoundsDrug DiscoverymedicineCytotoxic T cellHumansCell LineageFerrous CompoundsArtemisininMalaria FalciparumCytotoxicityIC50BenzofuransPharmacologyLeukemiabiologyOrganic ChemistryPlasmodium falciparumGeneral Medicinemedicine.diseasebiology.organism_classificationDrug Resistance MultipleMultiple drug resistanceLeukemiachemistryBiochemistry124-TrioxaneDrug Resistance Neoplasmmedicine.drugEuropean journal of medicinal chemistry
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Joziknipholones A and B: The First Dimeric Phenylanthraquinones, from the Roots ofBulbine frutescens

2007

From the roots of the African plant Bulbine frutescens (Asphodelaceae), two unprecedented novel dimeric phenylanthraquinones, named joziknipholones A and B, possessing axial and centrochirality, were isolated, together with six known compounds. Structural elucidation of the new metabolites was achieved by spectroscopic and chiroptical methods, by reductive cleavage of the central bond between the monomeric phenylanthraquinone and -anthrone portions with sodium dithionite, and by quantum chemical CD calculations. Based on the recently revised absolute axial configuration of the parent phenylanthraquinones, knipholone and knipholone anthrone, the new dimers were attributed to possess the P-co…

StereochemistryPlasmodium falciparumDrug ResistanceAnthraquinonesStereoisomerismPlant RootsAnthroneAnthraquinoneCatalysisSodium dithioniteAntimalarialsMicechemistry.chemical_compoundCell Line TumorLiliaceaeAnimalsAsphodelaceaeLeukemia L5178Plants MedicinalMolecular StructurebiologySpectrum AnalysisOrganic ChemistryDithioniteChloroquineStereoisomerismPlasmodium falciparumGeneral Chemistrybiology.organism_classificationAntineoplastic Agents PhytogenicRatschemistryQuantum TheoryBulbine frutescensChirality (chemistry)DimerizationAlgorithmsChemistry - A European Journal
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Rotenoids, Flavonoids, and Chalcones from the Root Bark of Millettia usaramensis.

2015

Five new compounds, 4-O-geranylisoliquiritigenin (1), 12-dihydrousararotenoid B (2), 12-dihydrousararotenoid C (3), 4'-O-geranyl-7-hydroxyflavanone (4), and 4'-O-geranyl-7-hydroxydihydroflavanol (5), along with 12 known natural products (6-17) were isolated from the CH2Cl2/MeOH (1:1) extract of the root bark of Millettia usaramensis ssp. usaramensis by chromatographic separation. The purified metabolites were identified by NMR spectroscopic and mass spectrometric analyses, whereas their absolute configurations were established on the basis of chiroptical data and in some cases also by X-ray crystallography. The crude extract was moderately active (IC50 = 11.63 μg/mL) against the ER-negative…

StereochemistryPlasmodium falciparumMolecular ConformationPharmaceutical Scienceroot barkCrystallography X-Ray01 natural sciencesMillettiaAnalytical ChemistryMillettia usaramensischemistry.chemical_compoundAntimalarialsChalconesDrug DiscoveryPlant BarkHumansta116IC50Nuclear Magnetic Resonance Biomolecularta317metabolitesPharmacologyFlavonoidsChromatographyNatural productbiologyMolecular Structure010405 organic chemistryChemistryPlant ExtractsOrganic ChemistryPlasmodium falciparumChloroquinebiology.organism_classification0104 chemical sciencesMillettia010404 medicinal & biomolecular chemistryChromatographic separationHEK293 CellsComplementary and alternative medicinevisual_artFlavanonesvisual_art.visual_art_mediumPlant BarkMolecular MedicineBarkrotenoidsJournal of natural products
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Naphthalene Derivatives from the Roots of Pentas parvifolia and Pentas bussei

2016

The phytochemical investigation of the CH2Cl2/MeOH (1:1) extract of the roots of Pentas parvifolia led to the isolation of three new naphthalenes, parvinaphthols A (1), B (2), and C (3), two known anthraquinones, and five known naphthalene derivatives. Similar investigation of the roots of Pentas bussei afforded a new polycyclic naphthalene, busseihydroquinone E (4), a new 2,2'-binaphthralenyl-1,1'-dione, busseihydroquinone F (5), and five known naphthalenes. All purified metabolites were characterized by NMR and MS data analyses, whereas the absolute configurations of 3 and 4 were determined by single-crystal X-ray diffraction studies. The E-geometry of compound 5 was supported by DFT-base…

StereochemistryPlasmodium falciparumPharmaceutical SciencePentasAnthraquinonesRubiaceaeCrystallography X-Ray010402 general chemistryPlant Roots01 natural sciencesAnalytical ChemistryAntimalarialsInhibitory Concentration 50chemistry.chemical_compoundBreast cancer cell lineDrug DiscoveryAnthraquinonesIc50 valuesHumansNuclear Magnetic Resonance Biomolecularta116naphthalene derivativesNaphthalenenaphthalenesPharmacologyPentasMolecular Structurebiology010405 organic chemistryOrganic Chemistryta1182Pentas parvifoliabiology.organism_classificationphytochemicals0104 chemical sciencesComplementary and alternative medicinechemistryPhytochemicalMolecular MedicineJournal of Natural Products
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