Search results for "Biochem"

showing 10 items of 20937 documents

Heavy enzymes and the rational redesign of protein catalysts

2019

Abstract An unsolved mystery in biology concerns the link between enzyme catalysis and protein motions. Comparison between isotopically labelled “heavy” dihydrofolate reductases and their natural‐abundance counterparts has suggested that the coupling of protein motions to the chemistry of the catalysed reaction is minimised in the case of hydride transfer. In alcohol dehydrogenases, unnatural, bulky substrates that induce additional electrostatic rearrangements of the active site enhance coupled motions. This finding could provide a new route to engineering enzymes with altered substrate specificity, because amino acid residues responsible for dynamic coupling with a given substrate present…

010402 general chemistryProtein Engineering01 natural sciencesBiochemistryCatalysisEnzyme catalysisisotope effectsCatalytic DomainDihydrofolate reductaseMolecular BiologyAlcohol dehydrogenasechemistry.chemical_classificationalcohol dehydrogenasesCarbon Isotopesdihydrofolate reductasesbiologyBacteriaNitrogen Isotopes010405 organic chemistryConceptOrganic ChemistryAlcohol DehydrogenaseActive siteSubstrate (chemistry)Protein engineeringDeuteriumCombinatorial chemistrymolecular dynamics0104 chemical sciencesKineticsTetrahydrofolate Dehydrogenaseenzyme engineeringEnzymechemistrybiology.proteinBiocatalysisMolecular MedicineConcepts
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Electrochemical Fluorocyclization of N-Allylcarboxamides to 2-Oxazolines by Hypervalent Iodine Mediator

2018

A resource saving protocol for the synthesis of 5-fluoromethyl-2-oxazolines by using electrochemistry has been realized. Thereby, a hypervalent iodine species I(III) is generated by anodic oxidation in the presence of Et3N·5HF and mediates the cyclization of N-allylcarboxamide to 5-fluoromethyl-2-oxazoline. This method allows application to various substrates furnishing the 2-oxazolines with yields up to 68%. The protocol is easy to conduct under constant current conditions offering a sustainable alternative over conventional reagent-based pathways.

010405 organic chemistryAnodic oxidationResource savingOrganic ChemistryHypervalent moleculechemistry.chemical_element010402 general chemistryIodineElectrochemistry01 natural sciencesBiochemistryCombinatorial chemistry0104 chemical scienceschemistryReagentPhysical and Theoretical ChemistryOrganic Letters
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An aryl-fused redox-active tetrathiafulvalene with enhanced mixed-valence and radical-cation dimer stabilities.

2018

Molecular recognition of stable organic radicals is a relatively novel, but important structural binding motif in supramolecular chemistry. Here, we report on a redox-switchable veratrole-fused tetrathiafulvalene derivative VTTF which is ideally suited for this purpose and for the incorporation into stimuli-responsive systems. As revealed by electrochemistry, UV/Vis measurements, X-ray analysis, and electrocrystallisation, VTTF can be reversibly oxidised to the corresponding radical-cation or dication which shows optoelectronic and structural propterties similar to tetrathiafulvalene and tetrakis(methylthio)tetrathiafulvalene. However, theoretical calculations, variable temperature EPR, and…

010405 organic chemistryChemistryArylDimerRadicalOrganic ChemistrySupramolecular chemistry010402 general chemistry01 natural sciencesBiochemistrysupramolecular chemistry0104 chemical scienceslaw.inventionDicationchemistry.chemical_compoundCrystallographyRadical ionlawsupramolekulaarinen kemiaPhysical and Theoretical ChemistryElectron paramagnetic resonanceta116TetrathiafulvaleneOrganicbiomolecular chemistry
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Palladium-catalyzed amination of aryl dibromides with secondary amines: synthetic and mechanistic aspects

1999

Abstract Diaminobenzenes are obtained starting from m- and p-dibromobenzenes and secondary amines in the presence of Pd(dba)2/P(o-tolyl)3and sodium tert-butoxide in moderate to good yields. Reductive dehalogenation of aryl dibromides is a major side reaction under these conditions. The study of this reaction has shown that the formation of reductive dehalogenation products occurs according to two independent ways. The first one proceeds via the well-known β-hydride elimination from amido-coordinated palladium complexes. The second one involves the formation of hydrido palladium complexes from amino-coordinated derivatives. Although our results do not allow us to propose a detailed mechanist…

010405 organic chemistryChemistryArylOrganic ChemistrySide reactionHalogenationchemistry.chemical_element010402 general chemistry01 natural sciencesBiochemistryCombinatorial chemistry0104 chemical sciencesCatalysischemistry.chemical_compoundDeprotonationDrug Discovery[CHIM]Chemical SciencesOrganic chemistryComputingMilieux_MISCELLANEOUSAminationPalladiumTetrahedron Letters
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A versatile rigid binucleating ligand for Rh2(μ-Cl)2 moieties: its application as a catalyst in hydrogenation and cyclopropanation

2003

A rigid non-deforming "MCl 2 M" binucleating ligand [7,8-μ-S(4'-C 6 H 3 (CH 3 ))S-C 2 B 9 H 1 0 ] - able to held the two rhodium atoms in a cooperative distance has been synthesized. The original two bridging chlorides are retained in [Rh 2 (C 5 Me 5 ) 2 Cl 2 {7,8-μ-S(4'-C 6 H 3 (CH 3 ))S-C 2 B 9 H 1 0 }] + . Hydrogenation of 1-hexene is 10 times faster with [Rh 2 (C 5 Me 5 ) 2 Cl 2 {7,8-μ-S(4'-C 6 H 3 (CH 3 ))S-C 2 B 9 H 1 0 }] + than with [Rh 2 (C 5 Me 5 ) 2 Cl 4 ]. A hydrogenation mechanism has been proposed which assumes that [Rh 2 (C 5 Me 5 ) 2 (Cl)(H){7,8-μ-S(4'-C 6 H 3 (CH 3 ))S-C 2 B 9 H 1 0 }] + is the first generated species in the process.

010405 organic chemistryChemistryCyclopropanationStereochemistryOrganic Chemistrychemistry.chemical_elementCrystal structure010402 general chemistry01 natural sciencesBiochemistryMedicinal chemistryRhodium compounds0104 chemical sciencesCatalysisRhodiumInorganic ChemistryMaterials ChemistryPhysical and Theoretical ChemistryJournal of Organometallic Chemistry
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Exploring the Chemoselectivity towards Cysteine Arylation by Cyclometallated Au III Compounds: New Mechanistic Insights

2020

To gain more insight into the factors controlling the efficient cysteine arylation by cyclometalated Au(III) complexes, the reaction between selected gold compounds and different peptides was investigated by high‐resolution liquid chromatography electrospray ionization mass spectrometry (HR‐LC‐ESI‐MS). The deducted mechanisms of C–S cross‐coupling, also supported by density functional theory (DFT) and quantum mechanics/molecular mechanics (QM/MM) calculations, evidenced the key role of secondary peptidic gold binding sites in favouring the process of reductive elimination.

010405 organic chemistryChemistryElectrospray ionizationOrganic Chemistrycyclometallated gold complexes010402 general chemistryMass spectrometry01 natural sciencesBiochemistryCombinatorial chemistryMolecular mechanicsReductive elimination0104 chemical sciencesddc:cysteine arylationGold CompoundschemoselectivitySettore CHIM/03 - Chimica Generale E InorganicapeptidesMolecular MedicineDensity functional theoryChemoselectivityMolecular BiologyCysteinemass spectrometry
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Assembling Halogen-Bonded Capsules via Cation Exchange

2017

Dr. Lotta Turunen is currently a postdoctoral researcher within Acad. Prof. Kari Rissanen's research group at the University of Jyvaskyla in Finland. Under his supervision, she obtained her MSc in organic chemistry and completed her PhD in chemistry in late September 2017. Her research focused on designing, synthesizing, and characterizing halogen-bonded supramolecular assemblies, capsules, and cages.

010405 organic chemistryChemistryGeneral Chemical EngineeringBiochemistry (medical)Supramolecular chemistryNanotechnologyGeneral Chemistry010402 general chemistry01 natural sciencesBiochemistry0104 chemical sciencesGroup (periodic table)HalogenMaterials ChemistryEnvironmental ChemistryOrganic chemistryChem
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TiO2 Nanoparticles Functionalized with Non-innocent Ligands Allow Oxidative Photocyanation of Amines with Visible/Near-Infrared Photons

2018

Photosynthesis is an efficient mechanism for converting solar light energy into chemical energy. We report on a strategy for the aerobic photocyanation of tertiary amines with visible and near-infrared (NIR) light. Panchromatic sensitization was achieved by functionalizing TiO2 with a 2-methylisoquinolinium chromophore, which captures essential features of the extended π-system of 2,7-diazapyrenium (DAP2+) dications or graphitic carbon nitride. Two phenolic hydroxy groups make this ligand highly redox-active and allow for efficient surface binding and enhanced electron transfer to the TiO2 surface. Non-innocent ligands have energetically accessible levels that allow redox reactions to chang…

010405 organic chemistryChemistryGraphitic carbon nitrideGeneral ChemistryCyanationChromophore010402 general chemistryPhotochemistry01 natural sciencesBiochemistryRedoxCatalysisNon-innocent ligand0104 chemical sciencesCatalysisElectron transferchemistry.chemical_compoundColloid and Surface ChemistryPhotocatalysisJournal of the American Chemical Society
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N,N′-Disubstituted Indigos as Readily Available Red-Light Photoswitches with Tunable Thermal Half-Lives

2017

Some rare indigo derivatives have been known for a long time to be photochromic upon irradiation with red light, which should be advantageous for many applications. However, the absence of strategies to tune their thermal half-lives by modular molecular design as well as the lack of proper synthetic methods to prepare a variety of such molecules from the parent indigo dye have so far precluded their use. In this work, several synthetic protocols for N-functionalization have been developed, and a variety of N-alkyl and N-aryl indigo derivatives have been prepared. By installation of electron-withdrawing substituents on the N-aryl moieties, the thermal stability of the Z-isomers could be enha…

010405 organic chemistryChemistryIndigos photoswitchesIndigo dyeGeneral Chemistry010402 general chemistryPhotochemistry01 natural sciencesBiochemistryCatalysisIndigo0104 chemical sciencesPhotochromismchemistry.chemical_compoundColloid and Surface ChemistryThermal[CHIM]Chemical SciencesMoleculeOrganic chemistryThermal stabilityIrradiationAbsorption (electromagnetic radiation)Journal of the American Chemical Society
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Hybrid Molecular Materials Based upon Magnetic Polyoxometalates and Organic π-Electron Donors:  Syntheses, Structures, and Properties of Bis(ethylene…

1998

International audience; The syntheses, crystal structures, and physical properties of the series of radical salts made with bis(ethylenedithio)tetrathiafulvalene (BEDT-TTF or ET) and monosubstituted α-Keggin polyoxoanions of formula [XZ(H2O)M11O39]5- (XZM11 = Si(IV)Fe(III)Mo11, Si(IV)Cr(III)W11, P(V)Con(II)W11, P(V)Ni(II)W11, P(V)Cu(II)W11 P(V)Zn(II)W11, P(V)Mn(II)W11, and P(V)Mn(II)Mo11) containing a magnetic metal ion Z on a peripheral octahedral site of the Keggin union are reported. They all crystallize in two related series called α2 and α3. The general structure consists of alternating layers of the organic donor and the Keggin polyoxometalates. While the stoichiometry and α-packing a…

010405 organic chemistryChemistryInorganic chemistryGeneral ChemistryCrystal structure010402 general chemistry01 natural sciencesBiochemistryCatalysis0104 chemical sciencesIonMetalCrystallographychemistry.chemical_compoundColloid and Surface ChemistryOctahedronPolymerizationvisual_artPhase (matter)visual_art.visual_art_medium[CHIM]Chemical SciencesStoichiometryTetrathiafulvaleneJournal of the American Chemical Society
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