Search results for "Biochemical Phenomena"

showing 10 items of 496 documents

Molecular evidence for ongoing complementarity and horizontal gene transfer in endosymbiotic systems of mealybugs

2014

[EN] Intracellular bacterial supply of essential amino acids is common among sap-feeding insects, thus complementing the scarcity of nitrogenous compounds in plant phloem. This is also the role of the two mealybug endosymbiotic systems whose genomes have been sequenced. In the nested endosymbiotic system from Planococcus citri (Pseudococcinae), “Candidatus Tremblaya princeps” and “Candidatus Moranella endobia” cooperate to synthesize essential amino acids, while in Phenacoccus avenae (Phenacoccinae) this function is performed by its single endosymbiont “Candidatus Tremblaya phenacola.” However, little is known regarding the evolution of essential amino acid supplementation strategies in oth…

Microbiology (medical)SubfamilyECOSISTEMAS AGROFORESTALES (UPV)“Candidatus Tremblaya phenacola”lcsh:QR1-502Amino acidbiosynthesisGenomeMicrobiologyCandidatus Tremblayaphenacolalcsh:MicrobiologyCandidatus Tremblayaprincepscandidatus tremblaya phenacolaBotanyPlanococcus citriPRODUCCION VEGETALOriginal Research Articlecandidatus tremblaya princepsMealybugAmino acid synthesischemistry.chemical_classificationGeneticsmealybugsendosymbiosisEndosymbiosisEndosymbiosisbiologyamino acid biosynthesisfungiHorizontal gene transferbiochemical phenomena metabolism and nutritionbiology.organism_classificationAmino acidMealybugschemistryHorizontal gene transferhorizontal gene transfer“Candidatus Tremblaya princeps”Frontiers in Microbiology
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Class 1 integrons in environmental and clinical isolates of Pseudomonas aeruginosa.

2011

The aims of this study were to ascertain the presence and spread of class 1 integrons amongst environmental and clinical isolates of Pseudomonas aeruginosa and to characterise their variable regions. A total of 76 isolates (56 clinical and 20 environmental) were studied. The presence of plasmids was explored, and polymerase chain reaction (PCR) was used for integron detection. All amplicons were sequenced. PCR detected class 1 integrons in 26 of the 56 clinical isolates; environmental isolates were integron-free. No plasmids were found, thus all the integrons found are possibly on the chromosome. Most isolates presented one amplicon, except PA110514 and PA116136, which showed two PCR produc…

Microbiology (medical)Transposable elementDNA BacterialMicrobial Sensitivity TestsBiologymedicine.disease_causeIntegronPolymerase Chain Reactionlaw.inventionMicrobiologyIntegronsPlasmidAntibiotic resistancelawDrug Resistance Multiple BacterialmedicineHumansPharmacology (medical)Pseudomonas InfectionsPolymerase chain reactionGeneticsPseudomonas aeruginosaGeneral Medicinebiochemical phenomena metabolism and nutritionAmpliconAnti-Bacterial AgentsBacterial Typing TechniquesInfectious DiseasesFomitesHorizontal gene transferPseudomonas aeruginosabiology.proteinbacteriaWater MicrobiologyPlasmidsInternational journal of antimicrobial agents
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Dissemination of CTX-M-Producing Escherichia coli in Freshwater Fishes From a French Watershed (Burgundy)

2019

International audience; The burden of extended-spectrum beta-lactamases producing Escherichia coli (ESBL-Ec), has increased over several decades. Freshwater ecosystems are suspected to play an important ecological and evolutionary role in driving the dissemination of antimicrobial resistance. The aim of our study was to decipher the occurrence of ESBL-Ec in a small watershed (Ouche river, Burgundy, France), targeting environmental matrices and fishes. Among cefotaxime resistant E. coli (ctxR Ec) isolates, we detected and characterized 36 ESBL-Ec from water, biofilm and fish guts. ctxR Ec and ESBL-Ec were found in samples from sites near the first small town, located downstream from the wate…

Microbiology (medical)Veterinary medicineCefotaximeESBL producing Escherichia coliantibiotic resistance[SDV]Life Sciences [q-bio]lcsh:QR1-502MLST E. colimedicine.disease_causeFreshwater ecosystemMicrobiologylcsh:Microbiologyclass 1 integron-integrase03 medical and health sciencesAntibiotic resistanceblaCTX–Mfreshwater;ESBL producing Escherichia coli;bla(CTX-M);class 1 integron-integrase;antibiotic resistance;fish;MLST E. colimedicine[SDV.BV]Life Sciences [q-bio]/Vegetal Biology14. Life underwaterbla(CTX-M)freshwaterEffluentEscherichia coliComputingMilieux_MISCELLANEOUS030304 developmental biologyOriginal Researchfish0303 health sciencesbiology030306 microbiologybiochemical phenomena metabolism and nutritionbiology.organism_classificationbacterial infections and mycoses6. Clean water13. Climate action[SDE]Environmental SciencesMultilocus sequence typingbla CTX–MOmnivoreBacteriamedicine.drugFrontiers in Microbiology
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Populations of extended-spectrum β-lactamase-producing Escherichia coli and Klebsiella pneumoniae are different in human-polluted environment and foo…

2021

Abstract Objectives To assess the extent to which food items are a source of extended-spectrum β-lactamase (ESBL) -producing Escherichia coli (ESBL-Ec) and ESBL-producing Klebsiella pneumoniae (ESBL-Kp) for humans in five European cities. Methods We sampled 122 human polluted (hp)-environments (sewers and polluted rivers, as a proxy of human contamination) and 714 food items in Besancon (France), Geneva (Switzerland), Sevilla (Spain), Tubingen (Germany) and Utrecht (The Netherlands). A total of 254 ESBL-Ec and 39 ESBL-Kp isolates were cultured. All genomes were fully sequenced to compare their sequence types (ST) and core genomes, along with the distribution of blaESBL genes and their genet…

Microbiology (medical)Veterinary medicineKlebsiella pneumoniaeEscherichia coli K. pneumoniae ESBL food environmentBiologyEnvironmentPolluted environmentmedicine.disease_causebeta-LactamasesK. pneumoniae03 medical and health sciencesFood chainPlasmidData sequencesExtended-spectrum β-lactamasemedicinepolycyclic compoundsEscherichia coliHumansEscherichia coliEscherichia coli Infections030304 developmental biologyddc:6160303 health sciences030306 microbiologyK pneumoniaeGeneral MedicineSequence typesbiochemical phenomena metabolism and nutritionbiology.organism_classificationbacterial infections and mycoses3. Good healthAnti-Bacterial AgentsKlebsiella InfectionsKlebsiella pneumoniaeInfectious Diseases[SDV.MP]Life Sciences [q-bio]/Microbiology and ParasitologyESBLFoodbacteria[SDV.MHEP]Life Sciences [q-bio]/Human health and pathologyPlasmids
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Occurrence of CTX-M Producing Escherichia coli in Soils, Cattle, and Farm Environment in France (Burgundy Region).

2012

Article en open access; International audience; CTX-M [a major type of extended-spectrum beta-lactamase (ESBU] producing Escherichia coli are increasingly involved in human infections worldwide. The aim of this study was to investigate potential reservoirs for such strains: soils, cattle, and farm environment. The prevalence of bla(CTX-M) genes was determined directly from soil DNA extracts obtained from 120 sites in Burgundy (France) using real-time PCR. bla(CTX-M) targets were found in 20% of the DNA extracts tested. Samples of cattle feces (n = 271) were collected from 182 farms in Burgundy. Thirteen ESBL-producing isolates were obtained from 12 farms and further characterized for the pr…

Microbiology (medical)Veterinary medicinesolBiodiversité et Ecologie[SDE.MCG]Environmental Sciences/Global ChangesPEDOLOGIElcsh:QR1-502extended-spectrum beta-lactamasefarm environmentbourgogneBiologymedicine.disease_causePastureMicrobiologyextended spectrum beta-lactamaselcsh:MicrobiologyMicrobiologysoilBiodiversity and Ecology03 medical and health sciencesbiologie du solGenotypeLong term survivalmedicineEscherichia coliCTX-MMilieux et Changements globauxEscherichia coliFeces030304 developmental biologyOriginal Researchbactérie2. Zero hunger0303 health sciencesgeographygeography.geographical_feature_category030306 microbiologyadnSoil dnabiochemical phenomena metabolism and nutritionbacterial infections and mycosesManureextended-spectrumbeta-lactamasecattlePEDOLOGIE;extended-spectrumbeta-lactamaseSoil water[SDE.BE]Environmental Sciences/Biodiversity and EcologyBurgundyFrontiers in microbiology
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Outbreak of CTX-M-15-producing Klebsiella pneumoniae of sequence type 199 in a Latvian teaching hospital

2010

Dumpis U, Iversen A, Balode A, Saule M, Miklasevics E, Giske CG. Outbreak of CTX-M-15-producing Klebsiella pneumoniae of sequence type 199 in a Latvian teaching hospital. APMIS 2010; 118: 713–6. Previous studies on the epidemiology of extended-spectrum β-lactamase (ESBL)-producing Enterobacteriaceae in Latvia are lacking. ESBL-producing Klebsiella pneumoniae (n = 32) were subjected to pulsed-field gel electrophoresis (PFGE) and selected isolates to multi-locus sequence typing (MLST). Species identification and susceptibility testing were performed using VITEK2, and sequencing of blaCTX-M was performed in selected isolates. PFGE revealed one major clone (n = 23), with most of the isolates de…

Microbiology (medical)biologyKlebsiella pneumoniaemedicine.medical_treatmentOutbreakGeneral Medicinebiochemical phenomena metabolism and nutritionbacterial infections and mycosesbiology.organism_classificationVirologyEnterobacteriaceaePathology and Forensic MedicineMicrobiologychemistry.chemical_compoundchemistryPulsed-field gel electrophoresisBeta-lactamasemedicineImmunology and AllergyMultilocus sequence typingTypingErtapenemAPMIS
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Identification of Shigella sonnei biotype g isolates carrying class 2 integrons in Italy in 2001-2003

2005

ABSTRACT Phenotyping and genotyping have been carried out on 64 epidemic and sporadic isolates of Shigella sonnei identified in Italy in the years 2001 to 2003. Class 2 integron carriage has been also investigated. Isolates from four of the five outbreaks and four of six sporadic cases were biotype g , pulsed-field gel electrophoresis type B, and class 2 integron positive, suggesting emergence and spread of an epidemic clone in Italy.

Microbiology (medical)clone (Java method)Genotypebiotype gSettore MED/42 - Igiene Generale e ApplicataOUTBREAKShigella sonneiIntegronPolymerase Chain Reactionlaw.inventionDisease OutbreaksIntegronslawGenotypeHumansShigella sonneiChildGenotypingPolymerase chain reactionDNA PrimersDysentery BacillaryGeneticsShigella sonnei ; epidemiology ; biotype g ; class 2 integrons ; ItalyRefugeesANTIMICROBIAL RESISTANCEbiologyBase SequenceOutbreakbiochemical phenomena metabolism and nutritionbacterial infections and mycosesclass 2 integronsVirologyElectrophoresis Gel Pulsed-FieldRESTRICTION PATTERNSCarriagePhenotypeItalybiology.proteinbacteriaepidemiology
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Amebas intestinales no patógenas: una visión clinicoanalítica

2011

Human beings can be parasitized by various species of intestinal amoebae. Entamoeba histolytica is the only intestinal amoeba recognized to be pathogenic, while other amoeba species, E. dispar, E. moshkovskii, E. hartmanni, E. coli, E. polecki, Endolimax nana and Iodamoeba buetschlii are considered to be non-pathogenic. The aim of this review is to synthesize the main morphological characteristics of the trophozoite and cyst stages of each amoeba as the basis for precise microscopical diagnosis. The difficulty of morphological differentiation among species included in the so-called "Entamoeba complex" entails the use of immunological and molecular diagnoses. In addition, a summary of basic …

Microbiology (medical)education.field_of_studybiologyEndolimax nanaPopulationEntamoeba colichemical and pharmacologic phenomenamacromolecular substancesbiochemical phenomena metabolism and nutritionbiology.organism_classificationEndolimaxMicrobiologyEntamoeba poleckiEntamoeba histolyticaparasitic diseasesEntamoeba moshkovskiiEntamoeba hartmannieducationcirculatory and respiratory physiologyEnfermedades Infecciosas y Microbiología Clínica
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Biofilm formation of listeria monocytogenes strains under food processing environments and pan-genome-wide association study

2019

International audience; Concerns about food contamination by Listeria monocytogenes are on the rise with increasing consumption of ready-to-eat foods. Biofilm production of L. monocytogenes is presumed to be one of the ways that confer its increased resistance and persistence in the food chain. In this study, a collection of isolates from foods and food processing environments (FPEs) representing persistent, prevalent, and rarely detected genotypes was evaluated for biofilm forming capacities including adhesion and sessile biomass production under diverse environmental conditions. The quantity of sessile biomass varied according to growth conditions, lineage, serotype as well as genotype bu…

Microbiology (medical)intraspecies diversity[SDV]Life Sciences [q-bio]biofilm;Listeria monocytogenes;pan-genome-wide association study;adhesion;intraspecies diversity;NaCl;nutrient deficiency;clonal complexlcsh:QR1-502Biologymedicine.disease_cause7. Clean energyMicrobiologylcsh:Microbiologybiofilm03 medical and health sciencesFood chainadhésionNutrientListeria monocytogenesNaClGenotypemedicineFood scienceOriginal Research030304 developmental biology2. Zero hungerpan-genome-wide association study0303 health sciences030306 microbiologyclonal complexBiofilmPan-genomebiochemical phenomena metabolism and nutritionListeria monocytogenesTransformation (genetics)adhesionnutrient deficiencylisteria monocytogènesFood contaminant
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In vitro activity of LY333328, a new glycopeptide, against extracellular and intracellular vancomycin-resistant enterococci.

2000

The objectives of the study were to observe the activity of LY333328, a new semisynthetic glycopeptide, compared to that of vancomycin against six strains of Enterococcus faecium and Enterococcus faecalis, including four vancomycin-resistant strains. Bacteria ingested by polymorphonuclear leukocytes (PMN) as well as extracellular bacteria were studied using a colony count method. The activity against intracellular bacteria was tested with the drugs present in the extracellular medium, as well as after preincubating the PMN and removal of the drugs. LY333328 is active against the tested enterococci, regardless of their susceptibility to vancomycin, with MICs of 1-2 mg/l. It is bacteriostatic…

Microbiology (medical)medicine.drug_classAntibioticsEnterococcus faeciumCell Culture TechniquesMicrobial Sensitivity TestsEnterococcus faecalisMicrobiologymedicineExtracellularEnterococcus faecalisHumansGram-Positive Bacterial InfectionsAntibacterial agentbiologyDose-Response Relationship DrugGlycopeptidesLipoglycopeptidesVancomycin ResistanceGeneral Medicinebiochemical phenomena metabolism and nutritionbiology.organism_classificationStreptococcaceaeGlycopeptideAnti-Bacterial AgentsInfectious DiseasesVancomycinmedicine.drugEnterococcus faeciumInfection
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