Search results for "Biochemistry"

showing 10 items of 20172 documents

Quantifying and addressing the prevalence and bias of study designs in the environmental and social sciences

2020

Building trust in science and evidence-based decision-making depends heavily on the credibility of studies and their findings. Researchers employ many different study designs that vary in their risk of bias to evaluate the true effect of interventions or impacts. Here, we empirically quantify, on a large scale, the prevalence of different study designs and the magnitude of bias in their estimates. Randomised designs and controlled observational designs with pre-intervention sampling were used by just 23% of intervention studies in biodiversity conservation, and 36% of intervention studies in social science. We demonstrate, through pairwise within-study comparisons across 49 environmental da…

0106 biological sciencesResearch designScientific communitySCIENTIFIC COMMUNITYMedio ambiente naturalsosiaalitieteetPsychological interventionGeneral Physics and AstronomySocial SciencesQH7501 natural sciencesEnvironmental impact//purl.org/becyt/ford/1 [https]010104 statistics & probability/706/648CredibilityPrevalenceSocial scienceComputingMilieux_MISCELLANEOUSGEMultidisciplinaryEcologyQarticleSampling (statistics)Biodiversitynäyttöön perustuvat käytännötsatunnaistetut vertailukokeetENVIRONMENTAL IMPACTResearch designResearch DesignScale (social sciences)[SDE]Environmental SciencesH1ScienceEnvironment010603 evolutionary biologyGeneral Biochemistry Genetics and Molecular BiologySocial sciencesBiastutkimusmenetelmätQH541/704/172/4081Humans0101 mathematics//purl.org/becyt/ford/1.6 [https]ympäristötieteetpoliittinen päätöksentekoClinical study designmetodologia/706/689General Chemistry15. Life on landEcologíaLiteraturePairwise comparisonObservational study/631/158luotettavuusBias; Biodiversity; Ecology; Environment; Humans; Literature; Prevalence; Research Design; Social SciencesNature Communications
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Ecological dependencies make remote reef fish communities most vulnerable to coral loss

2021

Ecosystems face both local hazards, such as over-exploitation, and global hazards, such as climate change. Since the impact of local hazards attenuates with distance from humans, local extinction risk should decrease with remoteness, making faraway areas safe havens for biodiversity. However, isolation and reduced anthropogenic disturbance may increase ecological specialization in remote communities, and hence their vulnerability to secondary effects of diversity loss propagating through networks of interacting species. We show this to be true for reef fish communities across the globe. An increase in fish-coral dependency with the distance of coral reefs from human settlements, paired with…

0106 biological sciencesRichnessconservation biologyekologiset verkostotGeneral Physics and Astronomy01 natural sciencesConservation of Natural ResourceAnthropogenic EffectmeriekologiaPatterns0303 health sciencesDiversityMultidisciplinaryConservation biologyCoral ReefsAnthropogenic EffectsQClimate-change ecologyFishesBiodiversityAnthozoaHabitat1181 Ecology evolutionary biologyCoral ReefHumanclimate-change ecologyConservation of Natural Resources[SDE.MCG]Environmental Sciences/Global ChangesScienceClimate ChangeBiotic interactions010603 evolutionary biologyGeneral Biochemistry Genetics and Molecular BiologyArticlekoralliriutat03 medical and health sciencesAnimals; Anthozoa; Anthropogenic Effects; Biodiversity; Climate Change; Conservation of Natural Resources; Coral Bleaching; Fishes; Humans; Spatial Analysis; Coral ReefsFood-webAnimalsHumansecological networks14. Life underwater030304 developmental biologySpatial AnalysisCoral BleachingAnimalkalakannatGeneral ChemistryDisturbanceSpatial Analysiilmastonmuutokset15. Life on landbiodiversiteetti13. Climate actionEcological networks[SDE.BE]Environmental Sciences/Biodiversity and EcologyFisheNature Communications
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Effect of temperature on pollen germination for several Rosaceae species: influence of freezing conservation time on germination patterns

2019

[EN] Between February 2018 and April 2018, flowers were collected from eight Rosaceae species. Flowers were kept in a freezer at -20 degrees C for three freezing times (Treatment 1, two months; Treatment 2, four months; Treatment 3, six months). After extracting pollen, in vitro germination was induced in a culture medium and incubated at six different temperatures for 72 h. The percentage of pollen germination, average pollen tube length and maximum pollen tube length were measured. Pollen germination was maximum for all species between 15 degrees C and 30 degrees C. Cydonia oblonga, Malus sylvestris, Prunus avium, Prunus domestica, Prunus dulcis, Prunus persica and Pyrus communis obtained…

0106 biological sciencesRosaceaePlumBOTANICAlcsh:MedicinePlant ScienceAlmondmedicine.disease_cause010603 evolutionary biology01 natural sciencesGeneral Biochemistry Genetics and Molecular BiologyPrunus cerasiferaPrunusPollenPollen tube lengthotorhinolaryngologic diseasesmedicineCherryAgricultural SciencebiologyGeneral NeuroscienceQuincelcsh:RApplefood and beveragesGeneral Medicinebiology.organism_classificationPeachPrunus dulcisHorticultureGerminationPollen germinationPearPollen tubeGeneral Agricultural and Biological Sciences010606 plant biology & botanyPyrus communis
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Adaptation in response to environmental unpredictability

2017

Understanding how organisms adaptively respond to environmental fluctuations is a fundamental question in evolutionary biology. The Mediterranean region typically exhibits levels of environmental unpredictability that vary greatly in habitats over small geographical scales. In cyclically parthenogenetic rotifers, clonal proliferation occurs along with occasional bouts of sex. These bouts contribute to the production of diapausing eggs, which allows survival between growing seasons. Here, we studied two diapause-related traits in rotifers using clones from nine Brachionus plicatilis natural populations that vary in the degree of environmental unpredictability. We tested the hypothesis that …

0106 biological sciencesRotiferaZoologyGrowing seasonEnvironmentDiapause010603 evolutionary biology01 natural sciencesGeneral Biochemistry Genetics and Molecular BiologyLife history theoryGenetic variationAnimalsOvumGeneral Environmental ScienceLocal adaptationEcologyGeneral Immunology and MicrobiologybiologyHatchingReproduction010604 marine biology & hydrobiologyGeneral MedicineBrachionusbiology.organism_classificationBiological EvolutionDiapauseAdaptationGeneral Agricultural and Biological SciencesProceedings of the Royal Society B: Biological Sciences
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Monitoring the reproductive activity in captive bred female ball pythons (P. regius) by ultrasound evaluation and noninvasive analysis of faecal repr…

2018

The royal python (Python regius) is commonly bred in captivity. To have a successful breeding season, accurate monitoring of the reproductive activity is necessary. The use of non-invasive monitoring methods in exotics is important in order to minimize stress. For this purpose ultrasound has been anecdotally used to monitor royal python reproductive activity. However, there is limited information regarding the reproductive cycle of this species. The aim of the present study is to monitor the female reproductive cycle of the royal python using ultrasonography and gonadal steroid metabolite measurements in the faeces. The reproductive activity of one hundred twenty-nine adult female P. regius…

0106 biological sciencesRoyal python (Python regius) female reproductive activity captive bred ultrasound evaluation faecal reproductive hormone metabolites progesterone 17β-estradiol noninvasive analysislcsh:MedicineCaptivityPhysiologyBiochemistry01 natural sciencesDiagnostic Radiology0403 veterinary scienceFecesUltrasound ImagingFollicular phaseMedicine and Health SciencesMetabolitesSeasonal breederLipid Hormonesfaecal reproductive hormone metabolitesPythonslcsh:ScienceUltrasonographyMultidisciplinaryEstradiolOrganic CompoundsReproductionRadiology and ImagingEukaryotaSnakes04 agricultural and veterinary sciencesSlugsSquamatesChemistrycaptive bredVertebratesPhysical SciencesRoyal python (Python regius)FemaleSteroidsFolliculogenesisResearch ArticleImaging Techniques040301 veterinary sciencesprogesteroneBiologyResearch and Analysis Methods010603 evolutionary biologyDiagnostic MedicineSex HormonesAnimalsFecesOrganic Chemistrylcsh:ROrganismsChemical Compoundsultrasound evaluation17β-estradiolBiology and Life SciencesReptilesEchogenicityMolluscsbiology.organism_classificationInvertebratesHormonesMetabolismfemale reproductive activityGastropodsnoninvasive analysisAmniotesRoyal pythonlcsh:QHormonePLOS ONE
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Can video playback provide social information for foraging blue tits?

2017

Video playback is becoming a common method for manipulating social stimuli in experiments. Parid tits are one of the most commonly studied groups of wild birds. However, it is not yet clear if tits respond to video playback or how their behavioural responses should be measured. Behaviours may also differ depending on what they observe demonstrators encountering. Here we present blue tits (Cyanistes caeruleus) videos of demonstrators discovering palatable or aversive prey (injected with bittertasting Bitrex) from coloured feeding cups. First we quantify variation in demonstrators’ responses to the prey items: aversive prey provoked high rates of beak wiping and head shaking. We then show tha…

0106 biological sciencesSELECTIONForage (honey bee)Computer scienceForagingsocial information uselcsh:MedicineCommon methodECOLOGY010603 evolutionary biology01 natural sciencesGeneral Biochemistry Genetics and Molecular BiologyPredationMECHANISMSSYSTEMS0501 psychology and cognitive sciences050102 behavioral science & comparative psychologySocial informationCommunicationblue titsbiologyAnimal Behaviorbusiness.industryGeneral Neuroscience05 social sciencesCyanisteslcsh:RANIMALSGeneral MedicineSocial cuebiology.organism_classificationEvolutionary StudiesGALLUS-GALLUSBeakSTIMULI1181 Ecology evolutionary biologyZEBRA FINCHESMATEta1181General Agricultural and Biological Sciencesbusinessvideo-playbackBEHAVIORPeerJ
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Reducing the effect of beauvericin on neuroblastoma SH-SY5Y cell line by natural products

2020

Abstract In the present work, different natural compounds from coffee by-product extracts (coffee silverskin and spent coffee) rich in polyphenols, was investigated against beauvericin (BEA) induced-cytotoxicity on SH-SY5Y cells. Spent coffee arise as waste products through the production of instant coffee and coffee brewing; while the silverskin is a tegument which is removed and eliminated with toasting coffee grains. First of all, polyphenol extraction methods, measurement of total polyphenols content and its identification were carried out. Afterwards evaluating in vitro effects with MTT assay on SH-SY5Y cells of coffee by-product extracts and mycotoxins at different concentrations and …

0106 biological sciencesSH-SY5YToxicologyCoffee01 natural sciencesAntioxidantsNeuroblastoma03 medical and health scienceschemistry.chemical_compoundChlorogenic acidCell Line TumorDepsipeptidesHumansMTT assayFood scienceMycotoxinBiological Products0303 health sciencesPlant ExtractsChemistrybusiness.industry010604 marine biology & hydrobiology030302 biochemistry & molecular biologyfood and beveragesMycotoxinsBeauvericinCell culturePolyphenolBrewingbusinessToxicon
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Regulation of reactive oxygen species production by a 14-3-3 protein in elicited tobacco cells.

2007

International audience; The regulation of the system responsible for the production of reactive oxygen species (ROS) during plant–microorganism interaction is still largely unknown. The protein NtrbohD has been recently demonstrated as the plasma membrane oxidase responsible for ROS production in elicited tobacco cells. Here, its C-terminus part was used as a bait in a two-hybrid screen in order to identify putative regulators of this system. This led to the isolation of a cDNA coding for a member of the 14-3-3 protein family. The corresponding transcript was induced after infiltration of tobacco leaves with the fungal elicitor cryptogein. Tobacco cells transformed with an antisense constru…

0106 biological sciencesSIGNALLINGDNA ComplementaryProtein familyPhysiologyMolecular Sequence DataContext (language use)Plant ScienceBiology01 natural sciences03 medical and health sciencesTwo-Hybrid System TechniquesTobaccoNADPH OXIDASEAmino Acid Sequence14-3-3 protein030304 developmental biologychemistry.chemical_classification[SDV.EE]Life Sciences [q-bio]/Ecology environment0303 health sciencesReactive oxygen speciesOxidase testCRYPTOGEINNADPH oxidaseSequence Homology Amino AcidElicitorchemistryBiochemistry14-3-3 ProteinsNAD(P)H oxidasebiology.proteinReactive Oxygen Species010606 plant biology & botanyPlant, cellenvironment
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Nitric oxide signalling in plants: interplays with Ca2+ and protein kinase

2008

International audience; Much attention has been paid to nitric oxide (NO)research since its discovery as a physiological mediator of plant defence responses. In recent years, newer roles have been attributed to NO, ranging from root development to stomatal closure. The molecular mechanisms underlying NO action in plants are just begun to emerge. The currently available data illustrate that NO can directly influence the activity of target proteins through nitrosylation and has the capacity to act as a Ca2+-mobilizing intracellular messenger. The interplay between NO and Ca2+ has important functional implications, expanding and enriching the possibilities for modulating transduction processes…

0106 biological sciencesSIGNALLINGPhysiologyPlant ScienceBiology01 natural sciencesNitric oxide03 medical and health sciencesTransduction (genetics)chemistry.chemical_compoundSNF-RELATED PROTEIN KINASE 2Mediator030304 developmental biology0303 health sciencesADP-RIBOSE CYCLIQUEPROTEIN KINASESKinaseCALCIUM 2+NitrosylationPlants[SDV.BV.BOT]Life Sciences [q-bio]/Vegetal Biology/BotanicsNitric oxide metabolismCell biologySignallingBiochemistrychemistryCalciumIntracellularNITRIC OXIDE010606 plant biology & botanySignal Transduction
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Cercospora beticola toxins. IX. Relationship between structure of beticolins, inhibition of plasma membrane H+ -ATPase and partition in lipid membran…

1996

Beticolins are yellow toxins produced by the fungus Cercospora beticola. The effect of one of them, beticolin-1, has been investigated on corn root plasma membrane H + -ATPase (EC 3.6.1.35) at different purification levels (plasma membrane fraction. partially, or highly purified enzyme). The results obtained demonstrated that (1) the purified proton pump was inhibited directly by low amounts of the toxin (I 50 =1.62 ± 0.18 μM), (2) the biological effects of beticolin-1 were similar to those of CBT (Cercospora beticola toxin). Furthermore, it was established that the efficiency of the different beticolins was clearly related to their ability to interact with the lipid bilayers, determined by…

0106 biological sciencesSTRUCTUREPhysiologyATPasePlant Science010402 general chemistrymedicine.disease_cause01 natural sciencesProton transportGeneticsmedicine[SDV.BV]Life Sciences [q-bio]/Vegetal Biology[SDV.BV] Life Sciences [q-bio]/Vegetal BiologyLipid bilayerComputingMilieux_MISCELLANEOUSchemistry.chemical_classificationLiposomeChromatographybiologyChemistryToxinCell BiologyGeneral MedicineCercospora beticolabiology.organism_classification0104 chemical sciencesMembraneEnzymeBiochemistrybiology.protein010606 plant biology & botany
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