Search results for "Biogeography"

showing 10 items of 310 documents

2018

Marine life of the Southern Ocean has been facing environmental changes and the direct impact of human activities during the past decades. Benthic communities have particularly been affected by such changes although we only slowly understand the effect of environmental changes on species physiology, biogeography, and distribution. Species distribution models (SDM) can help explore species geographic responses to main environmental changes. In this work, we modeled the distribution of four echinoid species with contrasting ecological niches. Models developed for [2005-2012] were projected to different time periods, and the magnitude of distribution range shifts was assessed for recent-past c…

0106 biological sciencesEcological nicheEcologyRange (biology)Ecology010604 marine biology & hydrobiologyBiogeographySpecies distributionMarine life15. Life on land010603 evolutionary biology01 natural sciencesGeographyBenthic zoneLocal extinction14. Life underwaterEndemismEcology Evolution Behavior and SystematicsNature and Landscape ConservationEcology and Evolution
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Phylogeography and Molecular Evolution of Potato virus Y

2012

Potato virus Y (PVY) is an important plant pathogen, whose host range includes economically important crops such as potato, tobacco, tomato, and pepper. PVY presents three main strains (PVYO, PVYN and PVYC) and several recombinant forms. PVY has a worldwide distribution, yet the mechanisms that promote and maintain its population structure and genetic diversity are still unclear. In this study, we used a pool of 77 complete PVY genomes from isolates collected worldwide. After removing the effect of recombination in our data set, we used Bayesian techniques to study the influence of geography and host species in both PVY population structure and dynamics. We have also performed selection and…

0106 biological sciencesEvolutionary GeneticsAmino-acid sitesSelective constraintsPotyviruslcsh:Medicine01 natural sciencesAmino-Acid SitesRecombinant strainPlant RNA virusesNegative selectionMaximum-Likelihoodlcsh:Sciencepathologie végétaleSelective ConstraintsPhylogenyGenetics0303 health sciencesCoat proteinMultidisciplinaryNatural selectionVegetal BiologybiologyEcologyGenetic-structurePotyvirusfood and beveragesEuropePhylogeneticsVenous necrosisPhylogeographyPotato virus YBiogeographyVenous NecrosisSequence AnalysisResearch ArticlePlant RNA VirusesGenome ViralMicrobiologyEvolution Molecular03 medical and health sciencesGenetic-StructureMolecular evolutionVirologyMosaic-virus[SDV.BV]Life Sciences [q-bio]/Vegetal BiologyEvolutionary SystematicsBiology030304 developmental biologySolanum tuberosumGenetic diversityEvolutionary BiologyMosaic virusHost (biology)Maximum-likelihoodlcsh:RComputational Biologyvirus à de la pomme de terreBayes Theoremlégumebiology.organism_classificationMutational analysisMosaic-VirusMutational AnalysisEvolutionary EcologyRecombinant StrainNorth Americalcsh:QBiologie végétalePopulation Genetics010606 plant biology & botany
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Biogeography of Triassic ammonoids

2015

After the end-Permian mass extinction, ammonoids experienced an explosive recovery followed by episodes of radiation and extinction. These events were associated with sudden biogeographic changes often closely related to major climatic and oceanographic changes. Previous biogeographic studies of Triassic ammonoids have rarely focused on a specific time-interval and were rarely based on quantitative methods. Thus, we will first review biogeographical methods and the biogeographical signals known from Triassic ammonoids. Secondly, we will focus on quantitative approaches that improve our knowledge of ammonoid biogeographical structuring and dynamics during the Triassic, and we will discuss co…

0106 biological sciencesExtinction event010506 paleontologyExtinctionBiogeographyOceanic circulationLadinian10125 Paleontological Institute and Museum010603 evolutionary biology01 natural sciencesPaleontologySea surface temperature560 Fossils & prehistoric life13. Climate actionHomogeneous14. Life underwater[SDU.STU.PG]Sciences of the Universe [physics]/Earth Sciences/PaleontologyGeologyComputingMilieux_MISCELLANEOUS0105 earth and related environmental sciences[ SDU.STU.PG ] Sciences of the Universe [physics]/Earth Sciences/Paleontology
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Fauna Europaea: Coleoptera 2 (excl. series Elateriformia, Scarabaeiformia, Staphyliniformia and superfamily Curculionoidea)

2015

Fauna Europaea provides a public web-service with an index of scientific names (including synonyms) of all living European land and freshwater animals, their geographical distribution at country level (up to the Urals, excluding the Caucasus region), and some additional information. The Fauna Europaea project covers about 230,000 taxonomic names, including 130,000 accepted species and 14,000 accepted subspecies, which is much more than the originally projected number of 100,000 species. This represents a huge effort by more than 400 contributing specialists throughout Europe and is a unique (standard) reference suitable for many users in science, government, industry, nature conservation an…

0106 biological sciencesFauna EuropaeaCleroideaInsectaCarbotripluridaAdephaga01 natural sciencesStaphyliniformiaBilateriaBiology (General)Biodiversity Informatics Coleoptera Fauna Europaea Taxonomic indexing.lcsh:QH301-705.5PolyphagaTenebrionoideaInvertebrataData ManagementBostrichoideaBiodiversity Informatics; Coleoptera; Fauna Europaea; Taxonomic indexing; Ecology Evolution Behavior and Systematics; EcologyPterygotabiologyEcologyEcologyCenozoicHexapodaCephalornisCurculionoideaLymexyloideaCircumscriptional namesddc:ColeopteraEuropeBoltonocostidaeDerodontoideaBiogeographyElateriformiaNeogeneCoelenterataData PaperFauna EuropaeaArthropodaEvolutionQH301-705.5Bioinformatics010607 zoologyNephrozoaChrysomeloideaProtostomia010603 evolutionary biologyCircumscriptional names of the taxon underAdephagaMyxophagaBehavior and SystematicsSystematicsStaphyliniformiaAnimaliaEcology Evolution Behavior and SystematicsMyxophagaEkologibiodiversity Informatics; coleoptera; fauna europaea; taxonomic indexingPharotarsusArchostemata15. Life on landbiology.organism_classificationArchostematalcsh:Biology (General)NotchiaBiodiversity InformaticsEcdysozoaTaxonomic indexingTaxonomic indexing.CucujoideaGlobal biodiversity
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Comparative biogeography of echinoids, bivalves and gastropods from the Southern Ocean.

2013

ABSTRACTAim Biogeographical patterns within three classes, the Echinoidea, Bivalvia andGastropoda, were investigated in Antarctic, sub-Antarctic and cold-temperateareas based on species occurrence data. Faunal similarities among regions wereanalysed to: (1) test the robustness of the biogeographical patterns previouslyidentified in bivalves and gastropods; (2) compare them with the biogeographi-cal patterns identified for echinoids; and (3) evaluate the reliability of the bio-geographical provinces previously proposed, depending on the taxa andtaxonomic levels analysed.Location The Southern Ocean, sub-Antarctic islands and cold-temperate areassouth of 45° S latitude at depths of < 1000 m.Meth…

0106 biological sciencesFaunaBiogeographyBiology010603 evolutionary biology01 natural sciencesLatitude[SDV.EE.ECO]Life Sciences [q-bio]/Ecology environment/EcosystemsGenusvicarianceVicariance14. Life underwaterdispersalEcology Evolution Behavior and Systematicstrans-Antarctic seaway[ SDE.BE ] Environmental Sciences/Biodiversity and Ecologysub-AntarcticEcologyEcology010604 marine biology & hydrobiologybootstrapped spanning networkCircumpolar star15. Life on land[ SDV.EE.ECO ] Life Sciences [q-bio]/Ecology environment/EcosystemsTaxon13. Climate actionBiological dispersalAntarctic[SDE.BE]Environmental Sciences/Biodiversity and Ecology
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Trends in summer presence of fin whales in the Western Mediterranean Sea Region: new insights from a long-term monitoring program

2020

Background The Mediterranean subpopulation of fin whale Balaenoptera physalus (Linnaeus, 1758) has recently been listed as Vulnerable by the IUCN Red List of threatened species. The species is also listed as species in need of strict protection under the Habitat Directive and is one of the indicators for the assessment of Good Environmental Status under the MSFD. Reference values on population abundance and trends are needed in order to set the threshold values and to assess the conservation status of the population. Methods Yearly summer monitoring using ferries as platform of opportunity was performed since 2008 within the framework of the FLT Med Network. Data were collected along sever…

0106 biological sciencesFin whale010504 meteorology & atmospheric sciencesConservation BiologyPopulationMarine BiologyDistributionAssessment01 natural sciencesMediterranean BasinGeneral Biochemistry Genetics and Molecular BiologyMediterranean seabiology.animalIUCN Red ListeducationTransect0105 earth and related environmental scienceseducation.field_of_studyBalaenopterabiologyEcologyWhale010604 marine biology & hydrobiologyGeneral NeuroscienceGeneral Medicinebiology.organism_classificationGeographyBiogeographyMediterranean seaConservation statusPhysical geographyTrendsGeneral Agricultural and Biological SciencesZoologyPeerJ
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Checklist of gypsophilous vascular flora in Italy

2018

Our understanding of the richness and uniqueness of the flora growing on gypsum substrates in Italy has grown significantly since the 19th century and, even today, new plant species are still being discovered. However, the plants and plant communities, growing on gypsum substrates in Italy, are still a relatively unknown subject. The main aim of this paper was to elaborate a checklist of the Italian gypsophilous flora, to increase knowledge about this peculiar flora and for which conservation efforts need to be addressed. Through a structured group communication process of experts (application of the Delphi technique), a remarkable number of experienced Italian botanists have joined togethe…

0106 biological sciencesFloraEdaphism Gypsophyte Habitats Directive Plant preservationBiodiversity & ConservationPlant SciencePoaceaePlant conservation010603 evolutionary biology01 natural sciencesFloristics & Distributionlcsh:BotanyEndemismEcology Evolution Behavior and SystematicsComputingMilieux_MISCELLANEOUSEdaphismEcologyEdaphism Gypsophyte Habitats Directive Plant conservationSettore BIO/02 - Botanica SistematicaSouthern Europe and MediterraneanGypsophyteEuphorbiaceaePlant community15. Life on landSpecies InventoriesEcology Evolution Behavior and SystematicChecklistHabitatslcsh:QK1-989Plant preservationEuropeHabitats DirectiveGeographyTaxonAngiospermaeHabitatBiogeographyecosystems & natural spacesSettore BIO/03 - Botanica Ambientale E ApplicataBrassicaceaeSpecies richnessHabitats DirectiveCatalogues and Checklists010606 plant biology & botanyResearch ArticlePhytoKeys
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2019

The Apennine Mountains in Italy are an important biogeographical region and of particular interest in phylogeographical research, because they have been a refugium during Pleistocene glaciation events for numerous European species. We performed a genetic study on the Eurasian bark beetle Pityogenes chalcographus (Linnaeus, 1760), focusing on two Apennine (Italian) and two Central European (Austrian) locations to assess the influence of the Apennines in the evolutionary history of the beetle, particularly during the Pleistocene. We analysed a part of the mitochondrial COI gene and a set of 5470 informative genome-wide markers to understand its biogeography. We found 75 distinct mitochondrial…

0106 biological sciencesGenetic diversityBark beetlePleistoceneEcologyBiogeographyPopulation genetics15. Life on landBiologybiology.organism_classification010603 evolutionary biology01 natural sciencesPhylogeographyRefugium (population biology)CladeEcology Evolution Behavior and SystematicsBiological Journal of the Linnean Society
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Improving the conservation of Mediterranean Chondrichthyans : the ELASMOMED DNA barcode reference library

2017

Cartilaginous fish are particularly vulnerable to anthropogenic stressors and environmental change because of their K-selected reproductive strategy. Accurate data from scientific surveys and landings are essential to assess conservation status and to develop robust protection and management plans. Currently available data are often incomplete or incorrect as a result of inaccurate species identifications, due to a high level of morphological stasis, especially among closely related taxa. Moreover, several diagnostic characters clearly visible in adult specimens are less evident in juveniles. Here we present results generated by the ELASMOMED Consortium, a regional network aiming to sample …

0106 biological sciencesHeredityMolecular biologySpeciationBiodiversitySettore BIO/05 - Zoologialcsh:MedicineJuvenileEvolutionary biologyBarcodeBiochemistry01 natural sciencesDNA barcodinglaw.inventionlawDNA librarieslcsh:ScienceChondrichthyesSpecimens IdentificationData ManagementMolecular systematicsMultidisciplinaryGeographyMediterranean RegionEcologyCryptic speciationFishesBiodiversityMorphological stasiMitochondrial DNANucleic acidsGenetic MappingPhylogeographyBiogeographyDNA Barcode Reference LibraryDNA barcoding TaxonomicVertebratesDNA data banksResearch ArticleComputer and Information SciencesConservation of Natural ResourcesEvolutionary ProcessesEvolutionary systematicsBarcoding Chondrichthyans Conservation Mediterranean Sea mtDNACartilaginous fishConservationBiologyPhylogeographic structure010603 evolutionary biologyMolecular taxonomySpecies SpecificityEndemic SpeciesGeneticsMediterranean SeaAnimalsDNA Barcoding TaxonomicDNA barcoding14. Life underwaterEndemismTaxonomyPopulation Biology010604 marine biology & hydrobiologylcsh:REcology and Environmental SciencesOrganismsBiology and Life SciencesDNAResearch and analysis methodsPhylogeographyMolecular biology techniquesTaxonHaplotypesThreatened speciesEarth SciencesSharksConservation statuslcsh:QPopulation GeneticsMarine biodiversity conservationElasmobranchii
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An annotated checklist of freshwater Copepoda (Crustacea, Hexanauplia) from continental Ecuador and the Galapagos Archipelago.

2019

An annotated checklist of the free-living freshwater Copepoda recorded in different regions in Ecuador (including the Amazon, the Andes, the coastal region, and the Galapagos Islands) is here provided. We revised all published records, critically evaluated the validity of each taxon and provided short taxonomic and biogeographical remarks for each one. A total of 27 taxa have been reported, including species and records at the generic level only. The species and taxa identified only up to the generic level belong to five families and 14 genera. The Cyclopoida is the most diverse group with 16 records belonging to species (or identified to the generic level only) and eight genera, followed b…

0106 biological sciencesHexanaupliaSettore BIO/05 - ZoologiaBiodiversityCyclopoida01 natural sciencesCrustacealcsh:ZoologyBilaterialcsh:QL1-991species richnessHarpacticoidaCalanoidaInvertebratageography.geographical_feature_categorybiologyEcologyAmazon rainforestCephalornisHarpacticoidaBiodiversityNeotropicfreshwater CopepodaChecklistBiogeographyArchipelagoEcuadorCoelenterataNeotropicsArthropodaNephrozoa010607 zoologyProtostomiaCircumscriptional names of the taxon underCopepodaFaunistics &amp; DistributionSystematicsgeographical distributionAnimaliaCalanoidaEcology Evolution Behavior and Systematicsgeography010604 marine biology & hydrobiologyCyclopoidaSouth Americabiology.organism_classificationTaxonNotchiaEcdysozoaAnimal Science and ZoologySpecies richnessCatalogues and ChecklistsAmericasMaxillopodaZooKeys
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