Search results for "Bioinformatics"

showing 10 items of 1632 documents

Medicinal Plants in the Treatment of Depression. II: Evidence from Clinical Trials

2021

AbstractDepression is a syndrome characterized by deep sadness and the inhibition of psychic functions, sometimes accompanied by neurovegetative disorders, with symptoms of anxiety almost always present. The disease produces alterations in a variety of neural networks and neurotransmission systems, along with a dysfunction of the hypothalamic-pituitary-adrenal axis, which leads to concomitant alterations in the immunological response. Generally, there is a parallel increase in proinflammatory mediators as well as oxidative and nitrosative damage caused by a reduction of antioxidant defenses. In a previous review, we compiled and examined studies of medicinal plants that had been evaluated i…

Hypothalamo-Hypophyseal SystemPituitary-Adrenal SystemPharmaceutical ScienceDiseaseBioinformaticsAntioxidantsAnalytical Chemistry03 medical and health sciences0302 clinical medicineDrug DiscoveryHumansMedicineMedicinal plantsDepression (differential diagnoses)PharmacologyPlants MedicinalKavaDepressionbusiness.industryOrganic ChemistryAntidepressive Agents030227 psychiatryClinical trialSystematic reviewComplementary and alternative medicineMolecular MedicineAntidepressantAnxietymedicine.symptombusinessHypericum030217 neurology & neurosurgeryPhytotherapySystematic Reviews as TopicPlanta Medica
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Role of physical activity in ameliorating neuropsychiatric symptoms in Alzheimer disease: A narrative review

2019

Objective: Neuropsychiatric symptoms (NPs) affect almost all patients with Alzheimer disease (AD). Because of the complications associated with the pharmacological treatment, nonpharmacological treatment (such as physical activity) can be considered as an additional complementary treatment option for NPs. The aim of this review is to evaluate the impact of physical activity on NPs in patients with AD. Methods: We searched Pubmed and Google Scholar for potential eligible articles until March 1, 2018. Results: Although there are contradictory results showing the impact of physical exercise on NPs, most of them reported that it had a significant effect on depression and sleep disturbances in p…

Hypothalamo-Hypophyseal SystemPituitary-Adrenal SystemPhysical exerciseDiseaseBioinformatics03 medical and health sciences0302 clinical medicineNeurotrophic factorsAlzheimer DiseasemedicineHumansApathyExerciseDepression (differential diagnoses)030214 geriatricsbusiness.industryMental DisordersAlzheimer disease neuropsychiatric symptoms physical activity physical exercisemedicine.diseaseExercise TherapyPsychiatry and Mental healthDisinhibitionA narrative review- INTERNATIONAL JOURNAL OF GERIATRIC PSYCHIATRY cilt.34 sa.9 ss.1316-1325 2019 [Veronese N. Solmi M. Basso C. Smith L. SOYSAL P. -Role of physical activity in ameliorating neuropsychiatric symptoms in Alzheimer disease]AnxietyGeriatrics and Gerontologymedicine.symptomAlzheimer's diseasebusiness
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Interval Length Analysis in Multi Layer Model

2009

In this paper we present an hypothesis test of randomness based on the probability density function of the symmetrized Kulback-Leibler distance estimated, via a Monte Carlo simulation, by the distributions of the interval lengths detected using the Multi-Layer Model (MLM). The $MLM$ is based on the generation of several sub-samples of an input signal; in particular a set of optimal cut-set thresholds are applied to the data to detect signal properties. In this sense MLM is a general pattern detection method and it can be considered a preprocessing tool for pattern discovery. At the present the test has been evaluated on simulated signals which respect a particular tiled microarray approach …

Hypothesis test Multi layer method BioinformaticsSet (abstract data type)Signal-to-noise ratioTheoretical computer scienceSettore INF/01 - InformaticaComputer scienceMonte Carlo methodProbability density functionInterval (mathematics)SignalAlgorithmRandomnessStatistical hypothesis testing
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Selection of suitable housekeeping genes for expression analysis in glioblastoma using quantitative RT-PCR

2009

Abstract Background Considering the broad variation in the expression of housekeeping genes among tissues and experimental situations, studies using quantitative RT-PCR require strict definition of adequate endogenous controls. For glioblastoma, the most common type of tumor in the central nervous system, there was no previous report regarding this issue. Results Here we show that amongst seven frequently used housekeeping genes TBP and HPRT1 are adequate references for glioblastoma gene expression analysis. Evaluation of the expression levels of 12 target genes utilizing different endogenous controls revealed that the normalization method applied might introduce errors in the estimation of…

Hypoxanthine PhosphoribosyltransferaseCell typeLung Neoplasmslcsh:QH426-470Journal ClubCellGene ExpressionComputational biologyBiologyBioinformaticsModels BiologicalVariable ExpressionReference genesExpression analysisGene expressionmedicineHumansStudent’s Sectionlcsh:QH573-671Molecular BiologyGeneSelection (genetic algorithm)GeneticsRegulation of gene expressionGenes Essentiallcsh:CytologyBrain NeoplasmsReverse Transcriptase Polymerase Chain ReactionMethodology ArticleGeneral NeuroscienceReference StandardsTATA-Box Binding Proteinmedicine.diseaseHousekeeping geneDNA-Binding ProteinsGene Expression Regulation Neoplasticlcsh:GeneticsNEOPLASIAS DO SISTEMA NERVOSOReal-time polymerase chain reactionmedicine.anatomical_structureGlioblastomaGlioblastomaAnnals of Neurosciences
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WITHDRAWN: Systems Biology and Immune Aging

2014

The Publisher regrets that this article is an accidental duplication of anarticle that has already been published, http://dx.doi.org/10.1016/j.imlet.2014.09.009 . The duplicate article has therefore been withdrawn.

Immune systembusiness.industryAccidentalSystems biologyImmunologyGene duplicationImmunology and AllergyMedicineBioinformaticsbusinessImmunology Letters
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Novel immunotherapies in multiple myeloma – chances and challenges

2021

In this review article, we summarize the latest data on antibody-drug conjugates, bispecific T-cell-engaging antibodies, and chimeric antigen receptor T cells in the treatment of multiple myeloma. We discuss the pivotal questions to be addressed as these new immunotherapies become standard agents in the management of multiple myeloma. We also focus on the selection of patients for these therapies and speculate as to how best to individualize treatment approaches. We see these novel immunotherapies as representing a paradigm shift. However, despite the promising preliminary data, many open issues remain to be evaluated in future trials.

Immunoconjugatesbusiness.industryT-LymphocytesHematologyReview ArticleBioinformaticsmedicine.diseaseChimeric antigen receptorReview articleAntibodies BispecificMedicineHumansImmunotherapybusinessMultiple MyelomaMultiple myelomaHaematologica
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MicroRNAs play a central role in molecular dysfunctions linking inflammation with cancer.

2013

It is now largely admitted that a pro-inflammatory environment may curtail anti-tumor immunity and favor cancer initiation and progression. The discovery that small non-coding regulatory RNAs, namely microRNAs (miRNAs), regulate all aspects of cell proliferation, differentiation, and function has shed a new light on regulatory mechanisms linking inflammation and cancer. Thus, miRNAs such as miR-21, miR-125b, miR-155, miR-196, and miR-210 that are critical for the immune response or hypoxia are often overexpressed in cancers and leukemias. Given the high number of their target transcripts, their deregulation may have a number of deleterious consequences, depending on the cellular context. In…

ImmunologyBiologyBioinformaticsmedicine.disease_causemiR-155Transforming Growth Factor betaNeoplasmsmicroRNAmedicineImmunology and AllergyAnimalsHumansTranscription factorCell ProliferationRegulation of gene expressionInflammationImmunityBiological TherapyGene Expression Regulation NeoplasticMicroRNAsCell Transformation NeoplasticTumor EscapeCancer researchTumor EscapeSignal transductionCarcinogenesisTransforming growth factorSignal TransductionTranscription FactorsImmunological reviews
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Molecular basis of filamin a-filGAP interaction and its impairment in congenital disorders associated with filamin a mutations

2008

Background Mutations in filamin A (FLNa), an essential cytoskeletal protein with multiple binding partners, cause developmental anomalies in humans. Methodology/Principal Findings We determined the structure of the 23rd Ig repeat of FLNa (IgFLNa23) that interacts with FilGAP, a Rac-specific GTPase-activating protein and regulator of cell polarity and movement, and the effect of the three disease-related mutations on this interaction. A combination of NMR structural analysis and in silico modeling revealed the structural interface details between the C and D β-strands of the IgFLNa23 and the C-terminal 32 residues of FilGAP. Mutagenesis of the predicted key interface residues confirmed the b…

ImmunoprecipitationFilaminsMolecular Sequence Dataeducationlcsh:MedicineComputational Biology/Protein Structure PredictionBiologyFilaminCell Biology/Cell SignalingCongenital AbnormalitiesBiochemistry/Protein Folding03 medical and health sciences0302 clinical medicineProtein structureContractile ProteinsCell Biology/CytoskeletonFLNAHumansFLNBFLNCAmino Acid Sequencelcsh:Science030304 developmental biologyGenetics0303 health sciencesMultidisciplinaryBinding SitesMolecular StructureSequence Homology Amino AcidPoint mutationlcsh:RGTPase-Activating ProteinsMicrofilament Proteins3. Good healthBiochemistry/BioinformaticsMutationProtein foldinglcsh:Q118 Biological sciences030217 neurology & neurosurgeryResearch Article
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Effect of platform switching on the peri-implant bone: A finite element study

2015

Background: There exists a relation between the presence and location of the micro-gap and the loss of peri-implant bone. Several authors have shown that the treatments based on the use of platform switching result in less peri-implant bone loss and an increased tissue stability. The purpose of this study was to analyse the effect of the platform switching on the distribution of stresses on the peri-implant bone using the finite element method. Material and Methods: A realistic 3D full-mandible finite element model representing cortical bone and trabecular bone was used to study the distribution of the stress on the bone induced by an implant of diameter 4.1 mm. Two abutments were modelled.…

Implantes dentalesMaterials scienceResearchOsteólisisPlatform switchingOdontologíaPeri implant bone:CIENCIAS MÉDICAS [UNESCO]BioinformaticsCiencias de la saludFinite element methodFinite element studyMasticatory forceStress (mechanics)medicine.anatomical_structureUNESCO::CIENCIAS MÉDICASmedicineCortical boneImplantImplantologyGeneral DentistryBiomedical engineeringJournal of Clinical and Experimental Dentistry
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3-Benzyl-3-hy-droxy-2-phenyl-3H-indole 1-oxide.

2010

The asymmetric unit of the title compound, C21H17NO2, contains two crystallographically independent molecules of similar geometry. The indole ring systems form dihedral angles of 8.30 (5) and 9.58 (5)° with the attached phenyl rings, and 56.96 (5) and 57.68 (5)° with the aromatic rings of the respective benzyl groups. The molecular conformations are stabilized by intramolecular C—H...O hydrogen bonds. In the crystal structure, centrosymmetrically related pairs of molecules are linked into dimers through pairs of intermolecular O—H...O hydrogen bonds, generating 12-membered rings with R22(12) motifs. The dimers are…

Indole testChemistryHydrogen bondOxideAromaticityGeneral ChemistryCrystal structureDihedral angleCondensed Matter PhysicsRing (chemistry)BioinformaticsOrganic Paperslcsh:ChemistryCrystallographychemistry.chemical_compoundlcsh:QD1-999General Materials ScienceActa crystallographica. Section E, Structure reports online
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