Search results for "Bioma"

showing 10 items of 5541 documents

Looking for Hidden Enemies of Metabarcoding: Species Composition, Habitat and Management Can Strongly Influence DNA Extraction while Examining Grassl…

2021

Despite the raising preoccupation, the critical question of how the plant community is composed belowground still remains unresolved, particularly for the conservation priority types of vegetation. The usefulness of metabarcoding analysis of the belowground parts of the plant community is subjected to a considerable bias, that often impedes detection of all species in a sample due to insufficient DNA quality or quantity. In the presented study we have attempted to find environmental factors that determine the amount and quality of DNA extracted from total plant tissue from above- and belowground samples (1,000 and 10,000 cm2). We analyzed the influence of land use intensity, soil properties…

0106 biological sciencesDNA qualitylcsh:QR1-502Plant Roots01 natural sciencesBiochemistrylcsh:MicrobiologyGrasslandgraminoid vegetationSoilCalamagrostis epigejosзлаковая растительностьSoil pHVegetation typeBiomassDNA extractionHolcus lanatusgeography.geographical_feature_categoryEcologybiologyвидовой составBiodiversityVegetationHydrogen-Ion ConcentrationPlantsGrasslandпастбищные сообществаЦентральная Европаbelowground diversityRegression AnalysisSeasonsДНКMagnesium OxideRiskrootsDNA PlantNitrogenPoaceae010603 evolutionary biologyкорнеплодыArticleCoronillaDNA Barcoding TaxonomicMolecular BiologyEcosystemgeographyсреда обитанияCentral EuropePlant communityDNAbiology.organism_classificationAgronomyметабаркодированиеPoland010606 plant biology & botanyBiomolecules
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Halophila stipulacea descriptors in the native area (Red Sea): A baseline for future comparisons with native and non-native populations

2018

Abstract Halophila stipulacea is a small tropical seagrass species native to the Red Sea. Due to its invasive character, there is growing interest in understanding its ability to thrive in a broad range of ecological niches. We studied temporal (February 2014 and July 2014), depth (5, 9, 18 m) and spatial (NB and SB) related dynamics of H. stipulacea meadows in the northern Gulf of Aqaba. We evaluated changes in density, morphometry, biomass, and biochemical parameters alongside the reproductive effort. In both sites, maximal growth and vegetative performance occurred in the summer with a marked increase of 35% in shoot density and 18% in biomass; PAR reduction with season and depth induced…

0106 biological sciencesDepth-adaptationSettore BIO/07 - EcologiaSettore BIO/07Range (biology)Anthropogenic pressuresPhenol contentAquatic ScienceSeagrass Temporal changes Depth-adaptation Anthropogenic pressures Morphometric and population parameters Phenol content Nitrogen storage Stable isotopesOceanography010603 evolutionary biology01 natural sciencesMorphometric and population parametersNitrogen storageSeagrassStable isotopesEcological nicheHalophila stipulaceaBiomass (ecology)biologyEcology010604 marine biology & hydrobiologyBaseline (sea)food and beveragesTemporal changesGeneral Medicinebiology.organism_classificationPollutionSexual reproductionSeagrassShoot
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Mitigating forest biodiversity and ecosystem service losses in the era of bio-based economy

2018

Abstract Forests play a crucial role in the transition towards a bioeconomy by providing biomass to substitute for fossil-based materials and energy. However, a policy-policy conflict exists between the desire to increase the utilization of bio based renewable resources and the desire to protect and conserve biodiversity. Increasing forest harvest levels to meet the needs of the bioeconomy may conflict with biodiversity protection and ecosystem services provided by forests. Through an optimization framework, we examined trade-offs between increasing the extraction of timber resources, and the impacts on biodiversity and non-wood ecosystem services, and investigated possibilities to reconcil…

0106 biological sciencesEconomics and Econometrics010504 meteorology & atmospheric sciencesSociology and Political ScienceoptimisationForest managementta1172Biodiversityforest managementeconomic systemsManagement Monitoring Policy and LawFellinguusiutuvat luonnonvarat010603 evolutionary biology01 natural sciencesEcosystem servicesoptimointiSet-asidetrade-off analysisRegeneration (ecology)ta512bioeconomy0105 earth and related environmental sciencesbiodiversityBiomass (ecology)AgroforestrymetsänkäsittelyForestry15. Life on landta4112talousjärjestelmätbiodiversiteetti13. Climate actionEnvironmental scienceta1181biotalousRenewable resourceForest Policy and Economics
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Unexpected high production of biohydrogen from the endogenous fermentation of grape must deposits

2020

International audience; The aim of this work was to assess the performances of wine byproduct biomass for hydrogen production by dark fermentation. Grape must deposits from two grape varieties (Pinot Gris and Chardonnay) were considered, either with external microbial inoculum or without. We show that grape must residues contain endogenous microflora, well adapted to their environment, which can degrade sugars (initially contained in the biomass) to hydrogen without any nutrient addition. Indeed, hydrogen production during endogenous fermentation is as efficient as with an external heat-treated inoculum (2.5 ± 0.4 LH2.L-1reactor and 1.61 ± 0.41 molH2.mol-1consumed hexose, respectively) with…

0106 biological sciencesEnvironmental EngineeringBiomassWinery wasteBioengineeringValorization010501 environmental sciences01 natural sciences7. Clean energyEndogenous fermentationBioreactorsRNA Ribosomal 16S010608 biotechnologyBioreactorVitisBiohydrogenFood scienceWaste Management and Disposal0105 earth and related environmental sciencesHydrogen productionWineRenewable Energy Sustainability and the EnvironmentChemistryfood and beveragesGeneral MedicineDark fermentationBiofuelFermentationFermentation[SDV.AEN]Life Sciences [q-bio]/Food and NutritionDark fermentationHydrogen
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Combination of the OSA process with thermal treatment at moderate temperature for excess sludge minimization

2019

Abstract This study investigated the chance to couple the conventional Oxic Settling Anaerobic (OSA) process with a thermic treatment at moderate temperature (35 °C). The maximum excess sludge reduction rate (80%) was achieved when the plant was operated under 3 h of hydraulic retention time (HRT). Compared with the conventional OSA system, the thermic treatment enabled a further improvement in excess sludge minimization of 35%. The observed yield coefficient decreased from 0.25 gTSS gCOD−1 to 0.10 gTSS gCOD−1 when the temperature in the anaerobic reactor was increased to 35 °C, despite the lower HRT (3 h vs 6 h). Moreover, the thermic treatment enabled the decrease of filamentous bacteria,…

0106 biological sciencesEnvironmental EngineeringHydraulic retention timeSegmented filamentous bacteriaBiomassBioengineeringThermal treatment010501 environmental sciencesWaste Disposal Fluid01 natural sciencesBioreactorsExtracellular polymeric substanceSettling010608 biotechnologyThermic treatmentAnaerobiosisBiomassWaste Management and Disposal0105 earth and related environmental sciencesOSA proceSewageSettore ICAR/03 - Ingegneria Sanitaria-AmbientaleRenewable Energy Sustainability and the EnvironmentChemistryTemperatureGeneral MedicinePulp and paper industryActivated sludgeActivated sludgeSludge minimizationBiomass kineticAnaerobic exerciseBioresource Technology
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Assessment and characterization of the bacterial community structure in advanced activated sludge systems

2019

Abstract The present study is aimed to assess and characterize the structure of bacterial community in advanced activated sludge systems. In particular, activated sludge samples were collected from an Integrated Fixed-film Activated Sludge – Membrane Bioreactor pilot plant under a University of Cape Town configuration with in-series anaerobic (Noair)/anoxic (Anox)/aerobic (Oxy) reactors – and further analyzed. The achieved results – based on Next Generation Sequencing (NGS) of 16S rDNA amplicons – revealed that the bacterial biofilm (bf) communities on plastic carriers of Oxy and Anox reactors had a greater diversity compared to suspended (sp) bacterial flocs of Oxy, Anox and Noair. Indeed,…

0106 biological sciencesEnvironmental EngineeringIFAS-MBRBiomassBioengineeringWastewater treatment010501 environmental sciencesMembrane bioreactor01 natural sciencesBioreactors010608 biotechnologyBiomassRhodobacteraceaeDNA extractionWaste Management and DisposalNGS of 16S rDNA amplicon0105 earth and related environmental sciencesSewageSettore ICAR/03 - Ingegneria Sanitaria-AmbientalebiologyRenewable Energy Sustainability and the EnvironmentChemistryMicrobiotaBiofilmGeneral Medicinebiology.organism_classificationPulp and paper industryAnoxic watersActivated sludgeBiofilmsSewage treatment16S rRNA geneBacterial communityBacteriaBioresource Technology
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Bioplastic recovery from wastewater: A new protocol for polyhydroxyalkanoates (PHA) extraction from mixed microbial cultures

2019

Abstract A new protocol for polyhydroxyalkanoates (PHA) extraction from mixed microbial cultures (MMCs) is proposed. PHA-accumulating capacity of the MMC was selected in a sequencing batch reactor (SBR) fed with a synthetic effluent emulating a fermented oil mill wastewater (OMW). The highest recovery yield and purity (74 ± 8% and 100 ± 5%, respectively) was obtained when using NH4-Laurate for which operating conditions of the extraction process such as temperature, concentration and contact time were optimized. Best conditions for PHA extraction from MMC turned to be: i) a pre-treatment with NaClO at 85 °C with 1 h of contact time, followed by ii) a treatment with lauric acid in a ratio ac…

0106 biological sciencesEnvironmental EngineeringPHABioengineeringSequencing batch reactorWastewater treatment010501 environmental sciencesWastewater01 natural sciencesBioplasticPolyhydroxyalkanoateschemistry.chemical_compoundBioreactors010608 biotechnologyBiomassWaste Management and DisposalEffluent0105 earth and related environmental sciencesSettore ICAR/03 - Ingegneria Sanitaria-AmbientaleRenewable Energy Sustainability and the EnvironmentChemistryPolyhydroxyalkanoatesExtraction (chemistry)Water resource recoveryGeneral MedicinePulp and paper industryLauric acidBioplasticWastewaterFermentationFermentationPlastics
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Simple learning rules to cope with changing environments

2008

10 pages; International audience; We consider an agent that must choose repeatedly among several actions. Each action has a certain probability of giving the agent an energy reward, and costs may be associated with switching between actions. The agent does not know which action has the highest reward probability, and the probabilities change randomly over time. We study two learning rules that have been widely used to model decision-making processes in animals-one deterministic and the other stochastic. In particular, we examine the influence of the rules' 'learning rate' on the agent's energy gain. We compare the performance of each rule with the best performance attainable when the agent …

0106 biological sciencesError-driven learningExploitComputer scienceEnergy (esotericism)Biomedical EngineeringBiophysicsBioengineeringanimal behavior010603 evolutionary biology01 natural sciencesBiochemistryMulti-armed banditModels Biologicaldecision makingBiomaterials03 medical and health sciences[ INFO.INFO-BI ] Computer Science [cs]/Bioinformatics [q-bio.QM][ SDV.EE.IEO ] Life Sciences [q-bio]/Ecology environment/SymbiosisAnimalsLearningComputer Simulation[ SDV.BIBS ] Life Sciences [q-bio]/Quantitative Methods [q-bio.QM]multi-armed banditEcosystem030304 developmental biologySimple (philosophy)0303 health sciences[ SDE.BE ] Environmental Sciences/Biodiversity and Ecologybusiness.industrydynamic environmentslearning rulesdecision-making[SDV.BIBS]Life Sciences [q-bio]/Quantitative Methods [q-bio.QM]Unlimited periodRange (mathematics)Action (philosophy)Artificial intelligence[SDE.BE]Environmental Sciences/Biodiversity and Ecology[INFO.INFO-BI]Computer Science [cs]/Bioinformatics [q-bio.QM]businessBiotechnologyResearch Article[SDV.EE.IEO]Life Sciences [q-bio]/Ecology environment/Symbiosis
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Evaluation of three methods for biomass estimation in small invertebrates, using three large disparate parasite species as model organisms

2018

AbstractInvertebrate biomass is considered one of the main factors driving processes in ecosystems. It can be measured directly, primarily by weighing individuals, but more often indirect estimators are used. We developed two indirect and non-destructive approaches to estimate biomass of small invertebrates in a simple manner. The first one was based on clay modelling and the second one was based on image analysis implemented with open-source software. Furthermore, we tested the accuracy of the widely used geometric approximation method (third method). We applied these three different methods to three morphologically disparate model species, an acanthocephalan worm, a crustacean and a flatw…

0106 biological sciencesEstimationBiomass (ecology)Multidisciplinary010604 marine biology & hydrobiologylcsh:RGeometric approximationlcsh:MedicineEstimator010603 evolutionary biology01 natural sciencesBiodiversitatArticleZoologialcsh:Qlcsh:ScienceBiological systemMathematicsInvertebrateScientific Reports
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Species disparity response to mutagenesis of marine yeasts for the potential production of biodiesel.

2019

Abstract Background Among the third-generation biodiesel feed stock, oleaginous marine yeasts are the least studied microorganisms for such purpose. Results Wild strains yeasts were isolated from various Tunisian marine sources including fish waste (Candida tenuis CtTun15, Debaryomyces hansenii DhTun2015, Trichosporon asahii TaTun15 and Yarrowia lipolytica YlTun15) and seawater (Rhodotorula mucilaginosa RmTun15). Following incubation with ethyl methanesulfonate (EMS: 75 mM) for various periods of time (T15, T30, T45, T60 min), the cell viability of these strains responded differentially according to yeast species. For instance, mutated CtTun15 did not survive after 30 min of EMS treatment; …

0106 biological sciencesEthyl methanesulfonatelcsh:BiotechnologyMicroorganismManagement Monitoring Policy and Law01 natural sciencesApplied Microbiology and Biotechnologylcsh:Fuel03 medical and health scienceschemistry.chemical_compoundEthyl methanesulfonatelcsh:TP315-360lcsh:TP248.13-248.65010608 biotechnologyDebaryomyces hanseniiFood scienceBiomassIncubationMutagenesis optimization030304 developmental biologychemistry.chemical_classification0303 health sciencesOleaginous yeastbiologyRenewable Energy Sustainability and the EnvironmentFatty acidCorrectionYarrowiaLipidbiology.organism_classificationFatty acidYeastddc:General EnergychemistryBiodiesel productionBiodieselBiotechnologyBiotechnology for biofuels
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