Search results for "Bol"

showing 10 items of 18211 documents

Dinosaur Metabolism and the Allometry of Maximum Growth Rate

2016

In his 2016 paper, Myhrvold criticized ours from 2014 on maximum growth rates (Gmax, maximum gain in body mass observed within a time unit throughout an individual’s ontogeny) and thermoregulation strategies (ectothermy, endothermy) of 17 dinosaurs. In our paper, we showed that Gmax values of similar-sized extant ectothermic and endothermic vertebrates overlap. This strongly questions a correct assignment of a thermoregulation strategy to a dinosaur only based on its Gmax and (adult) body mass (M). Contrary, Gmax separated similar-sized extant reptiles and birds (Sauropsida) and Gmax values of our studied dinosaurs were similar to those seen in extant similar-sized (if necessary scaled-up) …

0106 biological sciences0301 basic medicineMetabolic stateMetabolic AnalysisPhysiologylcsh:MedicineAnimal Phylogenetics01 natural sciencesBody TemperatureDinosaursMathematical and Statistical TechniquesExtant taxonMedicine and Health SciencesBody SizeGrowth ratelcsh:Sciencemedia_commonArchosauriaData ManagementMammalsMultidisciplinaryEcologyFossilsEukaryotaRegression analysisPrehistoric AnimalshumanitiesCurve FittingPhylogeneticsBioassays and Physiological AnalysisPhysiological ParametersEctothermPhysical SciencesVertebratesRegression AnalysisStatistics (Mathematics)Research ArticleComputer and Information Sciencesmedia_common.quotation_subjectVertebrate PaleontologyBiologyResearch and Analysis Methods010603 evolutionary biologyMarsupialsFormal CommentBirds03 medical and health sciencesBasal Metabolic Rate MeasurementAnimalsEvolutionary SystematicsStatistical MethodsPaleozoologyTaxonomyEvolutionary BiologyVariableslcsh:ROrganismsReptilesBiology and Life SciencesPaleontology030104 developmental biologyEvolutionary biologyBasal metabolic rateAmniotesEarth Scienceslcsh:QAllometryPaleobiologyEnergy MetabolismZoologyMathematical FunctionsMathematicsPLoS ONE
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Overexpression of the triose phosphate translocator (TPT) complements the abnormal metabolism and development of plastidial glycolytic glyceraldehyde…

2017

The presence of two glycolytic pathways working in parallel in plastids and cytosol has complicated the understanding of this essential process in plant cells, especially the integration of the plastidial pathway into the metabolism of heterotrophic and autotrophic organs. It is assumed that this integration is achieved by transport systems, which exchange glycolytic intermediates across plastidial membranes. However, it is unknown whether plastidial and cytosolic pools of 3-phosphoglycerate (3-PGA) can equilibrate in non-photosynthetic tissues. To resolve this question, we employed Arabidopsis mutants of the plastidial glycolytic isoforms of glyceraldehyde-3-phosphate dehydrogenase (GAPCp)…

0106 biological sciences0301 basic medicineMutantArabidopsisDehydrogenasePlant ScienceGlyceric Acids01 natural sciences03 medical and health sciencesGeneticsGlycolysisPlastidsPlastidGlyceraldehyde 3-phosphate dehydrogenasebiologyArabidopsis ProteinsGlyceraldehyde-3-Phosphate DehydrogenasesCell BiologyMetabolismCytosol030104 developmental biologyBiochemistryTriose phosphate translocatorbiology.proteinGlycolysis010606 plant biology & botanyThe Plant journal : for cell and molecular biology
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Defense Priming in Nicotiana tabacum Accelerates and Amplifies ‘New’ C/N Fluxes in Key Amino Acid Biosynthetic Pathways

2020

: In the struggle to survive herbivory by leaf-feeding insects, plants employ multiple strategies to defend themselves. One mechanism by which plants increase resistance is by intensifying their responsiveness in the production of certain defense agents to create a rapid response. Known as defense priming, this action can accelerate and amplify responses of metabolic pathways, providing plants with long-lasting resistance, especially when faced with waves of attack. In the work presented, short-lived radiotracers of carbon administered as 11CO2 and nitrogen administered as 13NH3 were applied in Nicotiana tabacum, to examine the temporal changes in &lsquo

0106 biological sciences0301 basic medicineNicotiana tabacumamino acid metabolismPlant Science01 natural sciencesplant insect herbivorySerine03 medical and health scienceschemistry.chemical_compoundBiosynthesislcsh:Botanynitrogen-13Shikimate pathwaycarbon-11Secondary metabolismEcology Evolution Behavior and SystematicsX-ray fluorescence imagingchemistry.chemical_classificationEcologybiologydefense primingJasmonic acidfungifood and beveragesbiology.organism_classificationlcsh:QK1-989Amino acidMetabolic pathway030104 developmental biologychemistryBiochemistryisotope ratio analysis010606 plant biology & botanyPlants
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The phosphorylated pathway of serine biosynthesis links plant growth with nitrogen metabolism

2021

Abstract Because it is the precursor for various essential cellular components, the amino acid serine is indispensable for every living organism. In plants, serine is synthesized by two major pathways: photorespiration and the phosphorylated pathway of serine biosynthesis (PPSB). However, the importance of these pathways in providing serine for plant development is not fully understood. In this study, we examine the relative contributions of photorespiration and PPSB to providing serine for growth and metabolism in the C3 model plant Arabidopsis thaliana. Our analyses of cell proliferation and elongation reveal that PPSB-derived serine is indispensable for plant growth and its loss cannot b…

0106 biological sciences0301 basic medicineNitrogenPhysiologyNitrogen assimilationCell RespirationArabidopsisPlant DevelopmentPlant Science01 natural sciencesSerine03 medical and health scienceschemistry.chemical_compoundPlant Growth RegulatorsBiosynthesisGlutamine synthetaseSerineGeneticsPhosphorylationResearch ArticlesCell Proliferationchemistry.chemical_classificationbiologyChemistryMetabolismBiosynthetic PathwaysAmino acid030104 developmental biologyBiochemistrybiology.proteinPhotorespirationGlutamine oxoglutarate aminotransferase010606 plant biology & botanyPlant Physiology
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Transcriptome Response of Metallicolous and a Non-Metallicolous Ecotypes of Noccaea goesingensis to Nickel Excess

2020

Root transcriptomic profile was comparatively studied in a serpentine (TM) and a non-metallicolous (NTM) population of Noccaea goesingensis in order to investigate possible features of Ni hyperaccumulation. Both populations were characterised by contrasting Ni tolerance and accumulation capacity. The growth of the TM population was unaffected by metal excess, while the shoot biomass production in the NTM population was significantly lower in the presence of Ni in the culture medium. Nickel concentration was nearly six- and two-fold higher in the shoots than in the roots of the TM and NTM population, respectively. The comparison of root transcriptomes using the RNA-seq method indicated disti…

0106 biological sciences0301 basic medicineNoccaea goesingensisPopulationecotypeschemistry.chemical_elementPlant ScienceBiology01 natural sciencesArticleShoot biomassTranscriptome03 medical and health scienceslcsh:Botanynickel (Ni)BotanyeducationGeneEcology Evolution Behavior and Systematicseducation.field_of_studytoleranceEcologyEcotypeEthylene metabolismlcsh:QK1-989Nickel030104 developmental biologychemistryShoot<i>Noccaea goesingensis</i>transcriptome010606 plant biology & botanyPlants
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Cultivar- and Wood Area-Dependent Metabolomic Fingerprints of Grapevine Infected by Botryosphaeria Dieback

2020

International audience; Botryosphaeria dieback is one of the most significant grapevine trunk diseases that affects the sustainability of the vineyards and provokes economic losses. The causal agents, Botryosphaeriaceae species, live in and colonize the wood of the perennial organs causing wood necrosis. Diseased vines show foliar symptoms, chlorosis, or apoplexy, associated to a characteristic brown stripe under the bark. According to the susceptibility of the cultivars, specific proteins such as PR-proteins and other defense-related proteins are accumulated in the brown stripe compared with the healthy woody tissues. In this study, we enhanced the characterization of the brown stripe and …

0106 biological sciences0301 basic medicinePerennial plant[SDV]Life Sciences [q-bio]Plant Science01 natural sciences03 medical and health sciencesMetabolomicsAscomycotaMetabolomicsVitisCultivarBotryosphaeriaPlant DiseasesChlorosisbiologyfood and beveragesBotryosphaeriaceaebiology.organism_classificationWoodHorticulture030104 developmental biologyPhytochemicalvisual_artvisual_art.visual_art_mediumBarkAgronomy and Crop Science010606 plant biology & botanyPhytopathology®
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Rhynchophorus ferrugineus attack affects a group of compounds rather than rearranging Phoenix canariensis metabolic pathways

2015

The red palm weevil (RPW; Rhynchophorus ferrugineus) is spreading worldwide and severely harming many palm species. However, most studies on RPW focused on insect biology, and little information is available about the plant response to the attack. In the present experiment, we used metabolomics to study the alteration of the leaf metabolome of Phoenix canariensis at initial (1st stage) or advanced (2nd stage) attack by RPW compared with healthy (unattacked) plants. The leaf metabolome significantly varied among treatments. At the 1st stage of attack, plants showed a reprogramming of carbohydrate and organic acid metabolism; in contrast, peptides and lipid metabolic pathways underwent more c…

0106 biological sciences0301 basic medicinePhenylpropanoidWeevilfood and beveragesPlant ScienceBiologybiology.organism_classification01 natural sciencesBiochemistryGeneral Biochemistry Genetics and Molecular BiologyTerpenoid03 medical and health sciencesMetabolic pathwayRhynchophorus030104 developmental biologyMetabolomicsBiochemistryPhoenix canariensisBotanyMetabolome010606 plant biology & botanyJournal of Integrative Plant Biology
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Phosphoglycerate Kinases Are Co-Regulated to Adjust Metabolism and to Optimize Growth

2017

[EN] In plants, phosphoglycerate kinase (PGK) converts 1,3-bisphosphoglycerate into 3-phosphoglycerate in glycolysis but also participates in the reverse reaction in gluconeogenesis and the Calvin-Benson cycle. In the databases, we found three genes that encode putative PGKs. Arabidopsis (Arabidopsis thaliana) PGK1 was localized exclusively in the chloroplasts of photosynthetic tissues, while PGK2 was expressed in the chloroplast/plastid of photosynthetic and nonphotosynthetic cells. PGK3 was expressed ubiquitously in the cytosol of all studied cell types. Measurements of carbohydrate content and photosynthetic activities in PGK mutants and silenced lines corroborated that PGK1 was the phot…

0106 biological sciences0301 basic medicinePhysiologyResearch Articles - Focus IssueMutantArabidopsisPlant ScienceGlyceric AcidsPlant Roots01 natural sciencesChloroplastGene03 medical and health sciencesCytosolGene Expression Regulation PlantArabidopsisGeneticsBIOQUIMICA Y BIOLOGIA MOLECULARMetabolomicsArabidopsis thalianaBamboo-Mosaic-VirusPlastidPhosphoglycerate kinaseGas-ChromatographybiologyArabidopsis ProteinsWild typefood and beveragesMetabolismArabidopsis-ThalianaPlant Components AerialPlants Genetically Modifiedbiology.organism_classificationHelianthus-Annuus L.3-Phosphoglycerate kinaseChloroplastPhosphoglycerate Kinase030104 developmental biologyBiochemistryMultigene FamilyMutationNicotiana-BenthamianaFISIOLOGIA VEGETALPlastics010606 plant biology & botanyPhosphorylating glyceraldehyde-3-phosphate dehydrogenaseGastric-Cancer
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Mixotrophy in diatoms: Molecular mechanism and industrial potential

2021

Diatoms are microalgae well known for their high variability and high primary productivity, being responsible for about 20% of the annual global carbon fixation. Moreover, they are interesting as potential feedstocks for the production of biofuels and high-value lipids and carotenoids. Diatoms exhibit trophic flexibility and, under certain conditions, they can grow mixotrophically by combing photosynthesis and respiration. So far, only a few species of diatoms have been tested for their mixotrophic metabolism; in some cases, they produced more biomass and with higher lipid content when grown under this condition. Phaeodactylum tricornutum is the most studied diatom species for its mixotroph…

0106 biological sciences0301 basic medicinePhysiologyrespiration.photosynthesisPlant SciencePhotosynthesisSettore BIO/19 - Microbiologia Generale01 natural sciences03 medical and health sciencesBotanydiatomMicroalgaeGeneticsSettore BIO/04 - Fisiologia VegetaleBiomassPhaeodactylum tricornutumPhotosynthesisTrophic levelDiatomsBiomass (ecology)biologyfungiCarbon fixationmicroalgaeCell BiologyGeneral Medicinebiology.organism_classificationmetabolism030104 developmental biologyDiatomBiofuelBiofuelsmixotrophyMixotroph010606 plant biology & botanyPhysiologia Plantarum
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Identification of conserved genes linked to responses to abiotic stresses in leaves among different plant species

2020

As a consequence of global climate change, certain stress factors that have a negative impact on crop productivity such as heat, cold, drought and salinity are becoming increasingly prevalent. We conducted a meta-analysis to identify genes conserved across plant species involved in (1) general abiotic stress conditions, and (2) specific and unique abiotic stress factors (drought, salinity, extreme temperature) in leaf tissues. We collected raw data and re-analysed eight RNA-Seq studies using our previously published bioinformatic pipeline. A total of 68 samples were analysed. Gene set enrichment analysis was performed using MapMan and PageMan whereas DAVID (Database for Annotation, Visuali…

0106 biological sciences0301 basic medicinePlant ScienceProtein degradationBiologyGenes Plant01 natural sciences03 medical and health scienceschemistry.chemical_compoundGene Expression Regulation PlantStress PhysiologicalSettore AGR/07 - Genetica AgrariaMYBSecondary metabolismAbscisic acidGeneAbiotic componentGeneticsabiotic-stresses differentially expressed genes leaves meta-analysis RNA-Seq transcriptomic.Abiotic stressGene Expression Profilingfungifood and beveragesPlant LeavesSettore AGR/03 - Arboricoltura Generale E Coltivazioni Arboree030104 developmental biologychemistryCinnamoyl-CoA reductaseAgronomy and Crop Science010606 plant biology & botany
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