Search results for "Branes"

showing 10 items of 525 documents

Pore Formation by a Bax-Derived Peptide: Effect on the Line Tension of the Membrane Probed by AFM

2007

AbstractBax is a critical regulator of physiological cell death that increases the permeability of the outer mitochondrial membrane and facilitates the release of the so-called apoptotic factors during apoptosis. The molecular mechanism of action is unknown, but it probably involves the formation of partially lipidic pores induced by Bax. To investigate the interaction of Bax with lipid membranes and the physical changes underlying the formation of Bax pores, we used an active peptide derived from helix 5 of this protein (Bax-α5) that is able to induce Bax-like pores in lipid bilayers. We report the decrease of line tension due to peptide binding both at the domain interface in phase-separa…

Models MolecularMembrane FluidityProtein ConformationLipid BilayersBiophysicsPeptide bindingPeptideMicroscopy Atomic ForceProtein structureBcl-2-associated X proteinMembrane fluiditySurface TensionComputer SimulationLipid bilayerbcl-2-Associated X Proteinchemistry.chemical_classificationLiposomeMembranesbiologyChemistryCell biologyMembraneModels ChemicalLiposomesbiology.proteinPorosityBiophysical Journal
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Membrane insertion and topology of the TRanslocating chain-Associating Membrane protein (TRAM)

2011

The translocating chain-associating membrane protein (TRAM) is a glycoprotein involved in the translocation of secreted proteins into the endoplasmic reticulum (ER) lumen and in the insertion of integral membrane proteins into the lipid bilayer. As a major step toward elucidating the structure of the functional ER translocation/insertion machinery, we have characterized the membrane integration mechanism and the transmembrane topology of TRAM using two approaches: photocross-linking and truncated C-terminal reporter tag fusions. Our data indicate that TRAM is recognized by the signal recognition particle and translocon components, and suggest a membrane topology with eight transmembrane seg…

Models MolecularProtein ConformationEndoplasmic ReticulumModels BiologicalProtein Structure SecondaryMiceMembranes (Biologia)Structural BiologyAnimalsMolecular BiologyIntegral membrane proteinSignal recognition particleMembrane GlycoproteinsbiologyMembrane transport proteinPeripheral membrane proteinProteïnes de membranaIntracellular MembranesTransloconTransmembrane proteinProtein Structure TertiaryMembrane proteinBiochemistryMembrane topologybiology.proteinBiophysics
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Quenching of fluorescein-conjugated lipids by antibodies. Quantitative recognition and binding of lipid-bound haptens in biomembrane models, formatio…

1992

Three model biomembrane systems, monolayers, micelles, and vesicles, have been used to study the influence of chemical and physical variables of hapten presentation at membrane interfaces on antibody binding. Hapten recognition and binding were monitored for the anti-fluorescein monoclonal antibody 4–4-20 generated against the hapten, fluorescein, in these membrane models as a function of fluorescein-conjugated lipid architecture. Specific recognition and binding in this system are conveniently monitored by quenching of fluorescein emission upon penetration of fluorescein into the antibody's active site. Lipid structure was shown to play a large role in affecting antibody quenching. Interes…

Models MolecularTime FactorsProtein ConformationStereochemistry030303 biophysicsMolecular ConformationBiophysicsModels BiologicalMice03 medical and health scienceschemistry.chemical_compoundAnimalsFluoresceinBinding siteLipid bilayerMicellesPhospholipids030304 developmental biologyPhosphatidylethanolamine0303 health sciencesLiposomeVesicleCell MembraneAntibodies MonoclonalMembranes ArtificialBiological membraneFluoresceinsKineticsSpectrometry FluorescencechemistryLiposomeslipids (amino acids peptides and proteins)Binding Sites AntibodyHaptensHaptenResearch ArticleBiophysical Journal
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Formation of irreversibly bound annexin A1 protein domains on POPC/POPS solid supported membranes

2008

AbstractThe specific interaction of annexin A1 with phospholipid bilayers is scrutinized by means of scanning force and fluorescence microscopy, quartz crystal microbalance, ellipsometry, and modeled by dynamic Monte Carlo simulations. It was found that POPC/POPS bilayers exhibit phase separation in POPC- and POPS-enriched domains as a function of Ca2+ concentration. Annexin A1 interacts with POPC/POPS bilayers by forming irreversibly bound protein domains with monolayer thickness on POPS-enriched nanodomains, while the attachment of proteins to the POPC-enriched regions is fully reversible. A thorough kinetic analysis of the process reveals that both, the binding constant of annexin A1 at …

Models Moleculargenetic structuresLipid BilayersBiophysicsPhospholipidAnalytical chemistryPhosphatidylserines02 engineering and technologyMicroscopy Atomic ForceBiochemistryBiophysical PhenomenaMembrane Lipids03 medical and health scienceschemistry.chemical_compoundProtein structureSFMMonolayerMicropatterned membranesAnimalsHumansPOPCMonte Carlo simulationAnnexin A1030304 developmental biologyFluorescence microscopy0303 health sciencesEllipsometrytechnology industry and agricultureCell BiologyQuartz crystal microbalanceSurface Plasmon Resonance021001 nanoscience & nanotechnologyBinding constantProtein Structure TertiaryMembraneMicroscopy FluorescencechemistryQCMPhosphatidylcholinesBiophysicsCalciumlipids (amino acids peptides and proteins)Adsorption0210 nano-technologyMonte Carlo MethodProtein BindingAnnexin A1Biochimica et Biophysica Acta (BBA) - Biomembranes
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Uptake of Acidic and Basic Sugar Derivatives in Lemna gibba G1

1989

The uptake of acidic and basic sugar derivatives in Lemna gibba L. was studied. Uronic acids applied to the experimental solution (50 millimolar) induced a small decrease of the membrane potential (10 +/- 1 millivolt galacturonic acid, and 20 +/- 4 millivolt glucuronic acid). After incubation of the plants in a 0.1 millimolar solution of these substrates, no decrease in the concentration of reducing groups in the external solution was detected. Respiration increased by 31% with 50 millimolar galacturonic acid, whereas no effect was found with the same concentration of glucuronic acid. Glucosamine caused a considerable concentration-dependent membrane depolarization. ((14)C)glucosamine uptak…

Molar concentrationChromatographybiologyPhysiologyChemistryLemna gibbaSubstrate (chemistry)Plant ScienceUronic acidCarbohydrateMembrane transportbiology.organism_classificationGlucuronic acidchemistry.chemical_compoundGlucosamineGeneticsMembranes and BioenergeticsPlant Physiology
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RNA-binding properties and membrane insertion of Melon necrotic spot virus (MNSV) double gene block movement proteins

2006

AbstractAdvances in structural and biochemical properties of carmovirus movement proteins (MPs) have only been obtained in p7 and p9 from Carnation mottle virus (CarMV). Alignment of carmovirus MPs revealed a low conservation of amino acid identity but interestingly, similarity was elevated in regions associated with the functional secondary structure elements reported for CarMV which were conserved in all studied proteins. Nevertheless, some differential features in relation with CarMV MPs were identified in those from Melon necrotic virus (MNSV) (p7A and p7B). p7A was a soluble non-sequence specific RNA-binding protein, but unlike CarMV p7, its central region alone could not account for t…

Molecular Sequence DataSequence alignmentBiologyMembranes (Biologia)VirologyAmino Acid SequencePeptide sequenceProtein secondary structureIntegral membrane proteinPlant DiseasesMelon necrotic spot virusCarmovirusProteïnes de membranaRNA-Binding ProteinsRNAbiology.organism_classificationRNA-binding domainVirusPlant Viral Movement ProteinsCucurbitaceaeMovement proteinsBiochemistryCarnation mottle virusMelon plantsCarmovirusMNSVMembrane insertionSequence AlignmentGene DeletionVirology
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Influence of chirality on the structure of phospholipid monolayers.

1993

Molecular StructureChemistryStereochemistryPhosphatidylethanolaminesSynthetic membranePhospholipidBiophysicsMolecular ConformationStereoisomerismMembranes ArtificialStereoisomerismCrystal structureMolecular conformationBiophysical Phenomenachemistry.chemical_compoundX-Ray DiffractionMonolayerBiophysicsMoleculeChirality (chemistry)PhospholipidsResearch ArticleBiophysical journal
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Effect of C/N shock variation on the performances of a moving bed membrane bioreactor.

2015

Abstract The effect of a sharp variation of C/N ratio in a moving bed membrane bioreactor (MB-MBR) pilot plant treating high strength wastewater has been investigated. The experimental campaign was divided into two periods, each characterized by a different C/N ratio (namely, 2.5 and 15, Period 1 and Period 2, respectively). The MB-MBR system was analyzed in terms of organic carbon removal, nitrification efficiency, biokinetic activity and fouling behavior. The results showed that the nitrification process was severely affected by lower C/N value and by high concentration of ammonia. It was noticed an extensive stress effect on the autotrophic bacteria. Furthermore, it was observed an incre…

Moving bed membrane bioreactorEnvironmental EngineeringBiofoulingNitrogenOLRBioengineeringPilot ProjectsC/N ratio; Moving bed membrane bioreactor; Nitrification; OLR; Bioengineering; Environmental Engineering; Waste Management and DisposalMembrane bioreactorWaste Disposal FluidAmmoniachemistry.chemical_compoundExtracellular polymeric substanceBiopolymersBioreactorsAmmoniaBioreactorBiomassWaste Management and DisposalBiological Oxygen Demand AnalysisChromatographyFoulingBacteriaRenewable Energy Sustainability and the EnvironmentChemistryMembranes ArtificialGeneral MedicineC/N ratioNitrificationCarbonMembraneChemical engineeringBiofilmsNitrificationOxidation-ReductionParticle depositionBioresource technology
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Potential use of the organic fraction of municipal solid waste in anaerobic co-digestion with wastewater in submerged anaerobic membrane technology

2016

Food waste was characterized for its potential use as substrate for anaerobic co-digestion in a submerged anaerobic membrane bioreactor pilot plant that treats urban wastewater (WW). 90% of the particles had sizes under 0.5 mm after grinding the food waste in a commercial food waste disposer. COD, nitrogen and phosphorus concentrations were 100, 2 and 20 times higher in food waste than their average concentrations in WW, but the relative flow contribution of both streams made COD the only pollutant that increased significantly when both substrates were mixed. As sulphate concentration in food waste was in the same range as WW, co-digestion of both substrates would increase the COD/SO4-S rat…

Municipal solid waste020209 energyCharacterization02 engineering and technologyGarbageWastewater010501 environmental sciencesSolid WasteCo-digestion01 natural sciencesMembrane technologyBioreactorsBiogas0202 electrical engineering electronic engineering information engineeringAnaerobiosisWaste Management and DisposalTECNOLOGIA DEL MEDIO AMBIENTE0105 earth and related environmental sciencesResource recoveryWaste managementChemistryFood wasteMembranes ArtificialResource recoveryPulp and paper industryMethane productionFood wasteAnMBRWastewaterBiofuelsAerationAnaerobic exercise
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Current rectification by nanoparticle blocking in single cylindrical nanopores.

2014

Blocking of a charged pore by an oppositely charged nanoparticle can support rectifying properties in a cylindrical nanopore, as opposed to the usual case of a fixed asymmetry in the pore geometry and charge distribution. We present here experimental data and model calculations to confirm this fundamental effect. The nanostructure imaging and the effects of nanoparticle concentration, pore radius, and salt concentration on the electrical conductance–voltage (G–V) curves are discussed. Logic responses based on chemical and electrical inputs/outputs could also be implemented with a single pore acting as an effective nanofluidic diode. To better show the generality of the results, different ch…

NanostructureMaterials scienceNanoparticleIonic bondingTransportNanotechnologyElectronQuantitative Biology::Subcellular ProcessesNanoporesRectificationElectrical resistivity and conductivityGeneral Materials ScienceQuantitative Biology::BiomoleculesMembranesPolyethylene TerephthalatesElectric ConductivityCharge densityAntibiotic moleculesNanoporePoresChemical physicsIon channelsFISICA APLICADAMicroscopy Electron ScanningNanoparticlesGradientNanoscale
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