Search results for "Buchnera"

showing 10 items of 61 documents

Prephenate dehydratase from the aphid endosymbiont (Buchnera) displays changes in the regulatory domain that suggest its desensitization to inhibitio…

2000

ABSTRACT Buchnera aphidicola , the prokaryotic endosymbiont of aphids, complements dietary deficiencies with the synthesis and provision of several essential amino acids. We have cloned and sequenced a region of the genome of B. aphidicola isolated from Acyrthosiphon pisum which includes the two-domain aroQ/pheA gene. This gene encodes the bifunctional chorismate mutase-prephenate dehydratase protein, which plays a central role in l -phenylalanine biosynthesis. Two changes involved in the overproduction of this amino acid have been detected. First, the absence of an attenuator region suggests a constitutive expression of this gene. Second, the regulatory domain of the Buchnera prephenate de…

DNA BacterialPhenylalanineMolecular Sequence DataPrephenate dehydratasePhenylalanineMicrobiologychemistry.chemical_compoundBiosynthesisBuchneraEscherichia coliAnimalsHumansAmino Acid SequenceEnzyme InhibitorsSymbiosisMolecular BiologyGenechemistry.chemical_classificationGeneticsBinding SitesbiologyBase SequenceSequence Homology Amino Acidbiochemical phenomena metabolism and nutritionbiology.organism_classificationPrephenate DehydrataseAmino acidEnzymeBiochemistrychemistryDehydrataseAphidsBuchneraGenome BacterialPopulation Genetics and EvolutionChorismate MutaseJournal of bacteriology
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Molecular characterization of the leucine cluster in Buchnera PSY, primary endosymbiont of the aphid Pemphigus spyrothecae

2002

ABSTRACT Buchnera strains from most aphid subfamilies studied to date have been found to carry the leucine gene cluster ( leuA , - B , - C , and - D ) on a plasmid, an organization unique among bacteria. Here, however, we demonstrate a classical chromosomal location of the cluster in Buchnera sp. strain PSY from the aphid Pemphigus spyrothecae (subfamily Pemphiginae). The genes that flank leuABCD in Buchnera sp. strain PSY appear to be adjacent in the genome of Buchnera sp. strain APS, a strain carrying a leucine plasmid. We propose that the presence of a leucine plasmid predates the diversification of symbiotic Buchnera and that the chromosomal location observed in Buchnera sp. strain PSY …

DNA BacterialSubfamilyMolecular Sequence DataPemphigus spyrothecaeApplied Microbiology and Biotechnologysymbiotic bacteriaPlasmidBacterial ProteinsBuchneraLeucineplasmidGene clusterevolutionInvertebrate MicrobiologyAnimalsgeneticsCloning MolecularSymbiosisGeneHydro-LyasesGeneticsBase SequenceEcologybiologyStrain (chemistry)Gene Amplificationbiochemical phenomena metabolism and nutritionbiology.organism_classificationPRI BioscienceMultigene FamilyLeucinebiosynthesisBuchneraPemphigusFood ScienceBiotechnologyanthranilate synthase trpegApplied and Environmental Microbiology
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Coexistence of Wolbachia with Buchnera aphidicola and a Secondary Symbiont in the Aphid Cinara cedri

2004

ABSTRACT Intracellular symbiosis is very common in the insect world. For the aphid Cinara cedri , we have identified by electron microscopy three symbiotic bacteria that can be characterized by their different sizes, morphologies, and electrodensities. PCR amplification and sequencing of the 16S ribosomal DNA (rDNA) genes showed that, in addition to harboring Buchnera aphidicola , the primary endosymbiont of aphids, C. cedri harbors a secondary symbiont (S symbiont) that was previously found to be associated with aphids (PASS, or R type) and an α-proteobacterium that belongs to the Wolbachia genus. Using in situ hybridization with specific bacterial probes designed for symbiont 16S rDNA seq…

Genetics and Molecular BiologyBacterial genome sizeBiologyDNA RibosomalPolymerase Chain ReactionMicrobiologyBuchneraRNA Ribosomal 16SBotanyAnimalsSymbiosisMolecular BiologyRibosomal DNAPhylogenyGeneticsAphidBacteriocytefungifood and beveragesbiochemical phenomena metabolism and nutritionbiology.organism_classificationMicroscopy ElectronAphidsCinarabacteriaWolbachiaBuchneraWolbachiaSymbiotic bacteriaJournal of Bacteriology
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A genome-scale study of metabolic complementation in endosymbiotic consortia: the case of the cedar aphid

2017

AbstractBacterial endosymbionts and their insect hosts establish an intimate metabolic relationship. Bacteria offer a variety of essential nutrients to their hosts, whereas insect cells provide the necessary sources of matter and energy to their tiny metabolic allies. These nutritional complementations sustain themselves on a diversity of metabolite exchanges between the cell host and the reduced yet highly specialized bacterial metabolism –which, for instance, overproduces a small set of essential amino acids and vitamins. A well-known case of metabolic complementation is provided by the cedar aphidCinara cedrithat harbors two co-primary endosymbionts,Buchnera aphidicolaBCc andCa.Serratia …

Genetics0303 health sciences030306 microbiologySystems biologyIn silicoMicrobial metabolismMetabolic networkBiologybiochemical phenomena metabolism and nutritionbiology.organism_classificationGenomeComplementation03 medical and health sciencesMetabolic pathwayBuchnera030304 developmental biology
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2006

Understanding evolutionary processes that drive genome reduction requires determining the tempo (rate) and the mode (size and types of deletions) of gene losses. In this study, we analysed five endosymbiotic genome sequences of the gamma-proteobacteria (three different Buchnera aphidicola strains, Wigglesworthia glossinidia, Blochmannia floridanus) to test if gene loss could be driven by the selective importance of genes. We used a parsimony method to reconstruct a minimal ancestral genome of insect endosymbionts and quantified gene loss along the branches of the phylogenetic tree. To evaluate the selective or functional importance of genes, we used a parameter that measures the level of ad…

Genetics0303 health sciencesPhylogenetic treeBiologyWigglesworthia glossinidiabiology.organism_classificationGenome03 medical and health sciencesNegative selection0302 clinical medicineEvolutionary biologyPhylogeneticsCodon usage biasBuchneraGene030217 neurology & neurosurgeryEcology Evolution Behavior and Systematics030304 developmental biologyBMC Evolutionary Biology
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Extreme genome reduction in Buchnera spp.: Toward the minimal genome needed for symbiotic life

2002

Buchnera is a mutualistic intracellular symbiont of aphids. Their association began about 200 million years ago, with host and symbiont lineages evolving in parallel since that time. During this coevolutionary process, Buchnera has experienced a dramatic decrease of genome size, retaining only essential genes for its specialized lifestyle. Previous studies reported that genome size in Buchnera spp. is very uniform, suggesting that genome shrinkage occurred early in evolution, and that modern lineages retain the genome size of a common ancestor. Our physical mapping of Buchnera genomes obtained from five aphid lineages shows that the genome size is not conserved among them, but has been red…

GeneticsDNA BacterialGenome evolutionMultidisciplinarybiologyBase SequenceMolecular Sequence DataGenome projectBacterial genome sizebiochemical phenomena metabolism and nutritionBiological Sciencesbiology.organism_classificationGenomeBuchneraGene densityAphidsAnimalsMinimal genomeBuchneraSymbiosisGenome sizeGenome Bacterial
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Why are the genomes of endosymbiotic bacteria so stable?

2003

The comparative analysis of three strains of the endosymbiotic bacterium Buchnera aphidicola has revealed high genome stability associated with an almost complete absence of chromosomal rearrangements and horizontal gene transfer events during the past 150 million years. The loss of genes involved in DNA uptake and recombination in the initial stages of endosymbiosis probably underlies this stability. Gene loss, which was extensive during the initial steps of Buchnera evolution, has continued in the different Buchnera lineages since their divergence.

GeneticsGene Transfer HorizontalbiologyEndosymbiosisbiochemical phenomena metabolism and nutritionbiology.organism_classificationGenomechemistry.chemical_compoundTransformation GeneticBuchnerachemistryEvolutionary biologyGene DuplicationHorizontal gene transferEscherichia coliGeneticsBuchneraGeneConserved SequenceGenome BacterialRecombinationDNAEndosymbiotic bacteriaTrends in Genetics
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Genome size reduction through multiple events of gene disintegration in Buchnera APS

2001

The evolution of the endosymbiont Buchnera during its adaptation to intracellular life involved a massive reduction in its genome. By comparing the orthologous genes of Buchnera, Escherichia coli and Vibrio cholerae, we show that the minimal genome size of Buchnera arose from multiple events of gene disintegration dispersed over the whole genome. The elimination of the genes was a continuous process that began with gene inactivation and progressed until the DNA corresponding to the pseudogenes were completely deleted.

GeneticsGenome evolutionPseudogeneBacterial genome sizebiochemical phenomena metabolism and nutritionBiologybiology.organism_classificationBiological EvolutionGenomeBuchneraEscherichia coliGeneticsMinimal genomeBuchneraVibrio choleraeGeneGenome sizeGene DeletionGenome BacterialPseudogenesTrends in Genetics
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Plasmids in the aphid endosymbiont Buchnera aphidicola with the smallest genomes. A puzzling evolutionary story

2006

Buchnera aphidicola, the primary endosymbiont of aphids, has undergone important genomic and biochemical changes as an adaptation to intracellular life. The most important structural changes include a drastic genome reduction and the amplification of genes encoding key enzymes for the biosynthesis of amino acids by their translocation to plasmids. Molecular characterization through different aphid subfamilies has revealed that the genes involved in leucine and tryptophan biosynthesis show a variable fate, since they can be located on plasmids or on the chromosome in different lineages. This versatility contrasts with the genomic stasis found in three distantly related B. aphidicola strains …

GeneticsRecombination GeneticSubfamilybiologyfood and beveragesChromosomeGeneral Medicinebiochemical phenomena metabolism and nutritionbiology.organism_classificationGenomeEvolution MolecularRec A RecombinasesPlasmidBuchneraAphidsGeneticsAnimalsLeucineAmino AcidsBuchneraSymbiosisGeneBacteriaGenome BacterialPlasmids
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Adaptive evolution in GroEL from distantly related endosymbiotic bacteria of insects

2005

Many symbioses between bacteria and insects resulted from ancient infections followed by strict vertical transmission within host lineages. The strong bottlenecks under which this transmission occurs promote the neutral fixation of slightly deleterious mutations by genetic drift. As predicted by Muller's ratchet, this fixation will drive endosymbiotic bacteria through an irreversible dynamics of fitness loss. The chaperonin GroEL has been proposed as a compensatory mechanism whereby endosymbiotic bacteria of aphids persist. Here, we show that endosymbiotic bacteria of insects from two phylogenetically very distant bacterial phyla have fixed amino acid substitutions by positive selection in …

GeneticsbiologyEndosymbiosisPeptide bindingGroESbiology.organism_classificationGroELChaperoninSymbiosisBotanybacteriaBuchneraEcology Evolution Behavior and SystematicsBacteriaJournal of Evolutionary Biology
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