Search results for "CAE"
showing 10 items of 601 documents
Adaptive reference-free compression of sequence quality scores
2014
Motivation: Rapid technological progress in DNA sequencing has stimulated interest in compressing the vast datasets that are now routinely produced. Relatively little attention has been paid to compressing the quality scores that are assigned to each sequence, even though these scores may be harder to compress than the sequences themselves. By aggregating a set of reads into a compressed index, we find that the majority of bases can be predicted from the sequence of bases that are adjacent to them and hence are likely to be less informative for variant calling or other applications. The quality scores for such bases are aggressively compressed, leaving a relatively small number at full reso…
Steroidal saponins from two species of Dracaena.
2010
Four new steroidal saponins (1-4) were isolated from the stem and bark of two species of Dracaena: deistelianosides A and B (1 and 2) from D. deisteliana and arboreasaponins A and B (3 and 4) from D. arborea. Six known saponins and one known sapogenin were also isolated. The structures of 1-4 were established as diosgenin 3-O-[3-O-sulfate-alpha-l-rhamnopyranosyl-(1-->4)]-beta-d-glucopyranoside (1), 1-O-beta-d-xylopyranosyl-(1-->2)-[alpha-l-rhamnopyranosyl-(1-->3)]-beta-d-fucopyranosyl(23S,24S)-spirosta-5,25(27)-diene-1beta,3beta,23alpha,24alpha-tetrol 24-O-alpha-l-arabinopyranoside (2), pennogenin-3-O-alpha-l-rhamnopyranosyl-(1-->2)-[alpha-l-rhamnopyranosyl-(1-->3)]-[6-O-acetyl]-beta-d-gluc…
Polymorphism in Cs[AgZn(NCS)4].
2002
The title compound, caesium silver zinc tetrathiocyanate, crystallizes in two polymorphic forms, in space groups P2(1)/n and C2/c. Both structures form a continuous three-dimensional network. The structure in C2/c contains a delocalized Ag atom in a binuclear-like anion, where two [Ag(NCS)(4)] units (delocalized Ag as an average) share two common NCS(-) ligands.
Evolutionary relationships among the members of an ancient class of non-LTR retrotransposons found in the nematode Caenorhabditis elegans.
1998
We took advantage of the massive amount of sequence information generated by the Caenorhabditis elegans genome project to perform a comprehensive analysis of a group of over 100 related sequences that has allowed us to describe two new C. elegans non-LTR retrotransposons. We named them Sam and Frodo. We also determined that several highly divergent subfamilies of both elements exist in C. elegans. It is likely that several master copies have been active at the same time in C. elegans, although only a few copies of both Sam and Frodo have characteristics that are compatible with them being active today. We discuss whether it is more appropriate under these circumstances to define only 2 elem…
Sulla potuit, ego non potero? (Cic. Att. 9, 10, 2). Il mito di Silla tra Pompeo e Cesare
2020
Silla diventa ben presto un vero e proprio exemplum, prezioso, anche per la sua flessibilità, per costruire una cornice di interpretazione della realtà. E d’altra parte le vicende di Silla sembrano costituire non a caso anche un ottimo dossier su cui imbastire exercitationes di scuola. Con il mito di Silla si confrontano ancora Pompeo e Cesare, soprattutto nella riflessione di Cicerone che alla prevedibile ‘sillanità’ del Grande non manca di associare anche i tratti sillani di Cesare. Silla soon becomes a real exemplum, precious, also for its flexibility, to build a framework for the interpretation of reality. And on the other hand, the events of Silla seem not by chance also to constitute …
Sponge proteins are more similar to those of Homo sapiens than to Caenorhabditis elegans
2000
We compared 42 phylogenetically conserved proteins from four marine sponges [Porifera] with almost the complete set of Caenorhabditis elegans proteins and all known proteins from humans. The majority of the sponge proteins are significantly more similar to human than to C. elegans orthologues/homologues. This finding reflects the accelerated evolutionary rate in the C. elegans lineage, since sponges split off first from the common ancestor of all multicellular animals. Furthermore, three sponge/human proteins were not found in C. elegans: (2–5)A synthetase, DNA repair helicase and lens βγ -crystallin. Sponges are the source of the most ancient proteins already present in the common ancestor…
Toxicological assessment of mesoporous silica particles in the nematode Caenorhabditis elegans
2018
[EN] Here we report the toxicological evaluation of mesoporous silica particles (MSPs) in the nematode C. elegans. Specifically, we have investigated the effect of bare micro- (M0) and nano-sized (N0) MSPs, and their corresponding functionalized particles with a starch derivative (Glu-N) (M1 and N1, respectively) on C. elegans ageing parameters. The toxicity of MSPs, their impact on C. elegans lifespan, movement capacity, progeny and ability to survive upon exposure to acute oxidative stress were assessed. This study demonstrated that both size particles assayed (M0 and N0), labeled with rhodamine and monitored through fluorescence microscopy, are ingested by the nematode. Moreover, toxicit…
Tacitus on Titus? Visit to the Temple of Venus at Paphos
2020
This article deals with Titus? visit to the temple of Venus at Paphos in the second book of Tacitus? Historiae. I argue that apart from its other literary intentions already mentioned by scholars, this digression implicitly connects Titus not only with Aeneas but also with Julius Caesar. Titus? affair with Berenice that recalls Caesar?s affair with Cleopatra, Tacitus? allusions to Lucan?s De Bello Civili where Caesar?s visit to the tomb of Alexander the Great is described, the ?????Motiv and fortuna?s favour that characterise both Roman generals, all contribute to connect Titus with Caesar and allow the reader to view a parallel between the Flavian and the Julio-Claudian dynasty. Furthermor…
Synaptic tetraspan vesicle membrane proteins are conserved but not needed for synaptogenesis and neuronal function in Caenorhabditis elegans
2006
Tetraspan vesicle membrane proteins (TVPs) comprise a major portion of synaptic vesicle proteins, yet their contribution to the synaptic vesicle cycle is poorly understood. TVPs are grouped in three mammalian gene families: physins, gyrins, and secretory carrier-associated membrane proteins (SCAMPs). In Caenorhabditis elegans , only a single member of each of these families exists. These three nematode TVPs colocalize to the same vesicular compartment when expressed in mammalian cells, suggesting that they could serve overlapping functions. To examine their function, C. elegans null mutants were isolated for each gene, and a triple mutant was generated. Surprisingly, these animals develop …
“The tale of the three little tits”: Different nest building solutions under the same environmental pressures
2020
Evolutionary selection pressures, and species-specific ecology and behavior, promote a great variability in the size and composition of nests. However, it would be expected that phylogenetically close species, with similar ecological needs, breeding at the same time in the same place, would also build similar nests. In contrast with this, previous studies have found differences in nest mass and composition among closely related sympatric species. These differences have been attributed to small differences in body size (smaller species building larger and/or more insulated nests), or to the different ways in which species perceive the environment (e.g. perceived predation risk). In this stud…