Search results for "CIP"

showing 10 items of 15068 documents

A Network Model for the Correlation between Epistasis and Genomic Complexity

2008

The study of genetic interactions (epistasis) is central to the understanding of genome organization and evolution. A general correlation between epistasis and genomic complexity has been recently shown, such that in simpler genomes epistasis is antagonistic on average (mutational effects tend to cancel each other out), whereas a transition towards synergistic epistasis occurs in more complex genomes (mutational effects strengthen each other). Here, we use a simple network model to identify basic features explaining this correlation. We show that, in small networks with multifunctional nodes, lack of redundancy, and absence of alternative pathways, epistasis is antagonistic on average. In c…

0106 biological sciencesSilent mutationGenome evolutionDNA Mutational Analysislcsh:MedicineBiology010603 evolutionary biology01 natural sciencesGenomeModels BiologicalCorrelation03 medical and health sciencesComputational Biology/Metabolic NetworksGenetics and Genomics/Population GeneticsAnimalsHumanslcsh:Science030304 developmental biologyGenomic organization0303 health sciencesEvolutionary BiologyMultidisciplinaryComputational Biology/Systems BiologyGenomeEvolutionary Biology/Evolutionary and Comparative GeneticsModels GeneticHuman evolutionary geneticsSystems Biologylcsh:RRobustness (evolution)Computational BiologyGenetics and GenomicsEpistasis GeneticGenomicsModels TheoreticalEvolutionary biologyMutationEpistasislcsh:QAlgorithmsResearch ArticlePLoS ONE
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The Selaginella Genome Identifies Genetic Changes Associated with the Evolution of Vascular Plants

2011

International audience; Vascular plants appeared ~410 million years ago, then diverged into several lineages of which only two survive: the euphyllophytes (ferns and seed plants) and the lycophytes. We report here the genome sequence of the lycophyte Selaginella moellendorffii (Selaginella), the first nonseed vascular plant genome reported. By comparing gene content in evolutionarily diverse taxa, we found that the transition from a gametophyte- to a sporophyte-dominated life cycle required far fewer new genes than the transition from a nonseed vascular to a flowering plant, whereas secondary metabolic genes expanded extensively and in parallel in the lycophyte and angiosperm lineages. Sela…

0106 biological sciencesSmall RNASELAGINELLA[SDV.BC]Life Sciences [q-bio]/Cellular Biology01 natural sciencesGenome03 medical and health sciencesSelaginella moellendorffiiSelaginellaGENETIQUE VEGETALEGeneInstitut für Biochemie und Biologie030304 developmental biologyGeneticsWhole genome sequencing0303 health sciencesMultidisciplinarybiologyfungiRNAfood and beverages15. Life on landbiology.organism_classificationSELAGINELLA MOELLENDORFFIIRNA editingLYCOPHYTE010606 plant biology & botany
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Life-cycle switching and coexistence of species with no niche differentiation.

2011

The increasing evidence of coexistence of cryptic species with no recognized niche differentiation has called attention to mechanisms reducing competition that are not based on niche-differentiation. Only sex-based mechanisms have been shown to create the negative feedback needed for stable coexistence of competitors with completely overlapping niches. Here we show that density-dependent sexual and diapause investment can mediate coexistence of facultative sexual species having identical niches. We modelled the dynamics of two competing cyclical parthenogens with species-specific density-dependent sexual and diapause investment and either equal or different competitive abilities. We show th…

0106 biological sciencesSpecies complexEcological Metricsmedia_common.quotation_subjectlcsh:MedicineMarine and Aquatic SciencesMarine BiologyDiapauseBiology010603 evolutionary biology01 natural sciencesCompetition (biology)Sexual Behavior AnimalTheoretical EcologyAnimalslcsh:ScienceBiologymedia_commonCoexistence theoryEcological nicheFreshwater EcologyFacultativeMultidisciplinaryEcologyPopulation BiologyEcology010604 marine biology & hydrobiologylcsh:RNiche differentiationSpecies DiversityBiodiversityModels TheoreticalSexual reproductionSpecies InteractionsCommunity EcologyEarth Scienceslcsh:QPopulation EcologyResearch ArticlePloS one
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Dynamic complexities in host-parasitoid interaction

1999

In the 1970s ecological research detected chaos and other forms of complex dynamics in simple population dynamics models, initiating a new research tradition in ecology. However, the investigations of complex population dynamics have mainly concentrated on single populations and not on higher dimensional ecological systems. Here we report a detailed study of the complicated dynamics occurring in a basic discrete-time model of host-parasitoid interaction. The complexities include (a) non-unique dynamics, meaning that several attractors coexist, (b) basins of attraction (defined as the set of the initial conditions leading to a certain type of an attractor) with fractal properties (pattern of…

0106 biological sciencesStatistics and ProbabilityEcology (disciplines)PopulationChaoticBiologyBifurcation diagram010603 evolutionary biology01 natural sciencesGeneral Biochemistry Genetics and Molecular Biologylaw.invention03 medical and health sciencesFractalControl theorylawIntermittencyAttractorQuantitative Biology::Populations and EvolutionStatistical physicseducation030304 developmental biology0303 health scienceseducation.field_of_studyGeneral Immunology and MicrobiologyApplied MathematicsGeneral MedicineComplex dynamicsModeling and SimulationGeneral Agricultural and Biological SciencesJournal of theoretical biology
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Future Cities. Urban Transformation and Sustainable Development

2016

The complex urban reality, in continuous evolution, are characterized by buildings, facilities, equipment, human capital, social capital and the ability to create sustainable economic development. Today, urban planning is called to respond to the new needs of the community, for this reason it is necessary to avoid the mistakes made in the past and think of a plan to be adapted to the change. All this is possible through the implementation of participatory strategic actions which ensure high levels of quality of life as well as responsible management of land resources. This outlines the concept of sustainable development and resilient cities, forcefully entered in today’s urban paradigm, bec…

0106 biological sciencesSustainable developmentSustainable mobilityResiliencemedia_common.quotation_subjectParticipationCitizen journalismPlan (drawing)ChangeSettore ICAR/21 - Urbanistica01 natural sciencesHuman capital010601 ecology03 medical and health sciences0302 clinical medicineWork (electrical)Urban planningPsychological resilienceBusinessEnvironmental planning030217 neurology & neurosurgerymedia_commonSocial capital
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Resolving the systematics of Richtersiidae by multilocus phylogeny and an integrative redescription of the nominal species for the genus Crenubiotus …

2020

AbstractThe family Richtersiidae, although established recently with the use of phylogenetic methods, was considered potentially paraphyletic at the time of its erection. Until now, the family comprised four genera, Richtersius, Diaforobiotus, Adorybiotus and a newly erected genus Crenubiotus. However, the genetic characterisation for the latter two genera was very limited or absent. To address concerns about the phylogenetic affinity of these two genera, we present a multilocus phylogeny of the families Richtersiidae and Murrayidae based on four molecular markers (18S rRNA, 28S rRNA, ITS-2 and COI). Our results show a distinct evolutionary lineage composed of Adorybiotus and Crenubiotus, w…

0106 biological sciencesSystematicsParaphylykarhukaisetEvolutionPopulation010607 zoologylcsh:MedicineBiology010603 evolutionary biology01 natural sciencesArticleGenusPhylogeneticsRNA Ribosomal 28SRNA Ribosomal 18STardigradaAnimalseducationlcsh:SciencePhylogenyeducation.field_of_studyMultidisciplinarysystematiikka (biologia)fylogenetiikkalcsh:RType speciesTaxonEvolutionary biologyTaxonomy (biology)lcsh:QZoologyScientific Reports
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Two new varieties in Stipa (Poaceae) from Central Asia

2016

Abstract The paper presents descriptions of two new taxa, Stipa ×brevicallosa var. hissarensis and Stipa orientalis var. ladakhorum. Both of them differ from the nominal varieties in having densely pubescent (not glabrous or scabrous) leaves of vegetative shoots. First of the above mentioned taxa occurs in Tajikistan (Pamir Alai Mts) whereas the second in India (Western Himalayas). Images of type specimens of both taxa are provided.

0106 biological sciencesTajikistanPamir AlaibiologyHimalayasAgroforestryEcology (disciplines)var. nov.Central asiafeather grassesIndiabiology.organism_classification010603 evolutionary biology01 natural sciencesGeographyPlant scienceGeneral Earth and Planetary SciencesStipaPoaceaelcsh:Qlcsh:Science010606 plant biology & botanyGeneral Environmental Science
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2021

Social insects are hosts of diverse parasites, but the influence of these parasites on phenotypic host traits is not yet well understood. Here, we tracked the survival of tapeworm-infected ant workers, their uninfected nest-mates and of ants from unparasitized colonies. Our multi-year study on the ant Temnothorax nylanderi, the intermediate host of the tapeworm Anomotaenia brevis, revealed a prolonged lifespan of infected workers compared with their uninfected peers. Intriguingly, their survival over 3 years did not differ from those of (uninfected) queens, whose lifespan can reach two decades. By contrast, uninfected workers from parasitized colonies suffered from increased mortality comp…

0106 biological sciencesTapeworm infection0303 health sciencesMultidisciplinaryTemnothorax nylanderived/biologyHost (biology)ved/biology.organism_classification_rank.speciesIntermediate hostZoologyBiologymedicine.disease010603 evolutionary biology01 natural sciencesANT03 medical and health sciencesLipid contentmedicineMetabolic rateSocial care030304 developmental biologyRoyal Society Open Science
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Egg parasitoid exploitation of plant volatiles induced by single or concurrent attack of a zoophytophagous predator and an invasive phytophagous pest

2019

AbstractZoophytophagous insect predators can induce physiological responses in plants by activating defence signalling pathways, but whether plants can respond to facultative phytophagy by recruiting natural enemies remains to be investigated. In Y-tube olfactometer bioassays, using a system including a Vicia faba plant, the zoophytophagous predator Podisus maculiventris and the egg parasitoid Telenomus podisi, we first demonstrated that T. podisi females are attracted by broad bean plants damaged by feeding activity of P. maculiventris and on which host egg masses had been laid, while they are not attracted by undamaged plants or plants damaged by feeding activity alone. In a second experi…

0106 biological sciencesTelenomus podisi Podisus maculiventris Halyomorpha halys indirect plant defences concurrent infestationslcsh:MedicineZoology010603 evolutionary biology01 natural sciencesArticlePredationParasitoidHeteropteraAnimalslcsh:ScienceSemiochemicalPredatorVolatile Organic CompoundsMultidisciplinaryInvasive speciesbiologyHost (biology)lcsh:Rfungifood and beveragesbiology.organism_classificationHymenopteraVicia faba010602 entomologyOlfactometerTelenomus podisilcsh:QPEST analysisAgroecologyScientific Reports
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Shift in Tuna Catches due to Ocean Warming.

2017

Ocean warming is already affecting global fisheries with an increasing dominance of catches of warmer water species at higher latitudes and lower catches of tropical and subtropical species in the tropics. Tuna distributions are highly conditioned by sea temperature, for this reason and their worldwide distribution, their populations may be a good indicator of the effect of climate change on global fisheries. This study shows the shift of tuna catches in subtropical latitudes on a global scale. From 1965 to 2011, the percentage of tropical tuna in longliner catches exhibited a significantly increasing trend in a study area that included subtropical regions of the Atlantic and western Pacifi…

0106 biological sciencesTime Factors010504 meteorology & atmospheric sciencesEffects of global warming on oceanslcsh:MedicineMarine and Aquatic SciencesOceanographyGlobal Warming01 natural sciencesOceansTropical climateClimate changeZoologíaPesqueríaslcsh:ScienceIndian OceanNorthern HemisphereLatitudeMultidisciplinaryGeographyFishesTemperatureAgricultureOsteichthyesVertebratesResearch ArticleCartographyOceans and SeasFisheriesClimate changeSede Central IEOSubtropicsAnimalsVulnerability of tropical countries to climate change14. Life underwaterOcean TemperatureTropical tuna distribution0105 earth and related environmental sciencesTropical ClimatePacific OceanTuna010604 marine biology & hydrobiologylcsh:RGlobal warmingOrganismsBiology and Life SciencesTropicsNumerical Analysis Computer-AssistedBodies of WaterModels TheoreticalFisherySea surface temperatureEffect on fisheries13. Climate actionEarth SciencesEnvironmental sciencelcsh:QTunaGeographic areas
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