Search results for "CLASSIFICATION"

2021

Climate change is having a serious impact on many ecosystems. In the summer of 2018 and 2019, around two thirds of European beech trees were damaged or killed by extreme drought. It is critical to keep these beech woods healthy, as they are central to the survival of over 6,000 other species of animals and plants. The level of damage caused by the drought varied between forests. However, not all the trees in each forest responded in the same way, with severely damaged trees often sitting next to fully healthy ones. This suggests that the genetic make-up of each tree determines how well it can adapt to drought rather than its local environment. To investigate this further, Pfenninger et al. …

Priming maritime pine megagametophytes during somatic embryogenesis improved plant adaptation to heat stress

2021

In the context of global climate change, forest tree research should be addressed to provide genotypes with increased resilience to high temperature events. These improved plants can be obtained by heat priming during somatic embryogenesis (SE), which would produce an epigenetic-mediated transgenerational memory. Thereby, we applied 37 °C or 50 °C to maritime pine (Pinus pinaster) megagametophytes and the obtained embryogenic masses went through the subsequent SE phases to produce plants that were further subjected to heat stress conditions. A putative transcription factor WRKY11 was upregulated in priming-derived embryonal masses, and also in the regenerated P37 and P50 plants, suggesting …

Identification and expression analysis of theSpodoptera exiguaneuropeptidome under different physiological conditions

2018

Neuropeptides are small signalling molecules acting as neurohormones, neurotransmitters and neuromodulators. Being part of the chemical communication system between cells within an organism, they are involved in the regulation of different aspects of animal physiology and behaviour such as feeding, reproduction, development and locomotion. Transcriptomic data from larval and adult tissues have been obtained and mined to generate a comprehensive neuropeptidome for the polyphagous insect pest Spodoptera exigua. Sixty-three neuropeptides have been identified and described based on their tissue specificity and their regulation in response to different abiotic perturbations. Expression analyses …

Effects of water stress on emission of volatile organic compounds by Vicia faba, and consequences for attraction of the egg parasitoid Trissolcus bas…

2017

When plants are damaged by herbivorous insects, blends of volatile organic compounds (VOCs) are induced and released and can also be used by parasitoids to locate hosts. The aim was to determine whether VOCs induced by water stress affect the plant-herbivore-para- sitoid system represented by broad bean (Vicia faba; Fabales: Fabaceae) stink bug (Nezara viridula; Hetero- ptera: Pentatomidae) egg parasitoid (Trissolcus basalis; Hymenoptera: Platygastridae). The effects of water stress (expressed as the percentage fraction of transpirable soil water [FTSW] supplied) alone and in combination with N. viridula damage (feeding plus oviposition) were deter- mined according to: (1) the behavioural r…

Effects of acclimation time and epigenetic mechanisms on growth of Neurospora in fluctuating environments

2017

AbstractReaction norms or tolerance curves have often been used to predict how organisms deal with fluctuating environments. A potential drawback is that reaction norms measured in different constant environments may not capture all aspects of organismal responses to fluctuating environments. We examined growth of the filamentous fungusNeurospora crassain fluctuating temperatures and tested if growth in fluctuating temperatures can be explained simply by growth in different constant temperatures or if more complex models are needed. In addition, as previous studies on fluctuating environments have revealed that past temperatures that organisms have experienced can affect their response to c…

Ecological genomics of adaptation to unpredictability in experimental rotifer populations

2019

AbstractElucidating the genetic basis of phenotypic variation in response to different environments is key to understanding how populations evolve. Facultatively sexual rotifers can develop adaptive responses to fluctuating environments. In a previous evolution experiment, diapause-related traits changed rapidly in response to two selective regimes (predictable vs unpredictable) in laboratory populations of the rotifer Brachionus plicatilis. Here, we investigate the genomic basis of adaptation to environmental unpredictability in these experimental populations. We identified and genotyped genome-wide polymorphisms in 169 clones from both selective regimes after seven cycles of selection usi…

Use of DNA barcoding in the assignment of commercially valuable fish species from Romania

2017

DNA barcoding is a molecular technique frequently used either for biodiversity monitoring and fish conservation or in the identification of the species of origin for raw and processed food from restaurants or fish markets. The most important aspect of this technique is that it works for all stages of life and can be used to distinguish between closely related taxa. Also, the technique has been used to unmask attempts of frauds in fish markets where more desirable and expensive fish are sometimes substituted with lower valued species. Our study aims to test the utility of the COI barcoding gene in the correct identification of several economically and ecologically valuable fish species, and …

Highly efficient construction of infectious viroid-derived clones

2019

[Background] Viroid research generally relies on infectious cDNA clones that consist of dimers of the entire viroid sequence. At present, those dimers are generated by self-ligation of monomeric cDNA, a strategy that presents several disadvantages: (i) low efficiency, (ii) it is a non-oriented reaction requiring tedious screenings and (iii) additional steps are required for cloning into a binary vector for agroinfiltration or for in vitro RNA production.

Crop density rather than ruderal plants explains the response of ancient segetal weeds

2018

AbstractThe influence of ruderal species and crop density on ancient segetal weeds was examined. The experiment was carried out on experimental plots with three different sewing densities of winter triticale. Weeding of ruderal taxa was applied on half of the plots to explore the relation between segetal and ruderal weeds. Variation in species composition by environmental variables was analysed by running Redundancy Analysis (RDA) combined with performing forward selection and variation partitioning for “weeding” and “crop density” as explanatory variables. Additionally, the effect of crop density and weeding was tested separately for segetal and ruderal species along the seasons with the u…

Variation in the immune state of Gammarus pulex (Crustacea, Amphipoda) according to temperature: are extreme temperatures a stress?

2017

9 pages; International audience; Temperature is known to impact host-parasite interactions in various ways. Such effects are often regarded as the consequence of the increased metabolism of parasites with increasing temperature. However, the effect of temperature on hosts' immune system could also be a determinant. Here we assessed the influence of temperature on the immunocompetence of the crustacean amphipod Gammarus pulex. Amphipods play a key ecological role in freshwater ecosystems that can be altered by several parasites. We investigated the consequences of three weeks of acclimatization at four temperatures (from 9 °C to 17 °C) on different immunological parameters. Temperature influ…