Search results for "CONSTANT"

showing 10 items of 1718 documents

Quantitative characterization of tetraspanin 8 homointeractions in the plasma membrane

2021

The spatial distribution of proteins in cell membranes is crucial for signal transduction, cell communication and membrane trafficking. Members of the Tetraspanin family organize functional protein clusters within the plasma membrane into so-called Tetraspanin-enriched microdomains (TEMs). Direct interactions between Tetraspanins are believed to be important for this organization. However, studies thus far have utilized mainly co-immunoprecipitation methods that cannot distinguish between direct and indirect, through common partners, interactions. Here we study Tetraspanin 8 homointeractions in living cells via quantitative fluorescence microscopy. We demonstrate that Tetraspanin 8 exists i…

Cell signalingTetraspaninsLipoylationDimerTransfectionBiochemistryArticleProtein–protein interactionchemistry.chemical_compoundMembrane MicrodomainsTetraspaninFluorescence Resonance Energy TransferHumansMolecular BiologyChemistryCell BiologyDissociation constantHEK293 CellsMembraneMicroscopy FluorescenceMembrane proteinembryonic structuresBiophysicsThermodynamicsProtein MultimerizationSignal transductionSignal TransductionBiochemical Journal
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Computational identification of chemical compounds with potential anti-Chagas activity using a classification tree

2021

Chagas disease is endemic to 21 Latin American countries and is a great public health problem in that region. Current chemotherapy remains unsatisfactory; consequently the need to search for new drugs persists. Here we present a new approach to identify novel compounds with potential anti-chagasic action. A large dataset of 584 compounds, obtained from the Drugs for Neglected Diseases initiative, was selected to develop the computational model. Dragon software was used to calculate the molecular descriptors and WEKA software to obtain the classification tree. The best model shows accuracy greater than 93.4% for the training set; the tree was also validated using a 10-fold cross-validation p…

Chagas diseaseComputer scienceTrypanosoma cruziAntiprotozoal AgentsQuantitative Structure-Activity RelationshipBioengineeringLigandsMachine learningcomputer.software_genre01 natural sciencesConstant false alarm rateSoftwareMolecular descriptorDrug DiscoveryChagas Diseaseclassification treeVirtual screeningMolecular Structure010405 organic chemistrybusiness.industryDecision tree learningGeneral Medicinevirtual screening0104 chemical sciences010404 medicinal & biomolecular chemistryIdentification (information)Tree (data structure)Anti-chagasic actionTest setMolecular MedicineArtificial intelligencebusinesscomputerSoftware
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Nonlocal (Pair Site) Reactivity from Second-Order Static Density Response Function:  Gas- and Solution-Phase Reactivity of the Acetaldehyde Enolate a…

1999

A nonlocal (pair site) reactivity scheme is developed and tested. The theory is cast in terms of the first-order Fukui response function f(r,r‘), previously proposed by Fuentealba and Parr [J. Chem. Phys. 1991, 94, 5559]. A change of variables is introduced by using the softness s(r) and t(r) = [∂s(r)/∂N]υ(r) (the variation of softness with respect to the changes in the total number of electrons N at constant external potential υ(r)) that leads to a simple expression for the variation of the Fukui function at site k, namely = − for an electrophilic attack. The first term describes a local contribution, proportional to the variation of the electrostatic potential that can be induced, for exa…

Change of variables (PDE)Computational chemistryChemistryOrder (group theory)ThermodynamicsReactivity (chemistry)ElectronFunction (mathematics)Physical and Theoretical ChemistryConstant (mathematics)Fukui functionVariable (mathematics)The Journal of Physical Chemistry A
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On groups having a p-constant character

2020

Let G G be a finite group, and p p a prime number; a character of G G is called p p -constant if it takes a constant value on all the elements of G G whose order is divisible by p p . This is a generalization of the very important concept of characters of p p -defect zero. In this paper, we characterize the finite p p -solvable groups having a faithful irreducible character that is p p -constant and not of p p -defect zero, and we will show that a non- p p -solvable group with this property is an almost-simple group.

Character (mathematics)Applied MathematicsGeneral MathematicsQuantum mechanicsCharacter theoryMathematicsofComputing_GENERALCharacter Theory; Finite GroupsConstant (mathematics)GeneralLiterature_REFERENCE(e.g.dictionariesencyclopediasglossaries)Mathematics
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Speciation of Al3+ in fairly concentrated solutions (20 to 200 mmol L-1) at I = 1 mol L-1 (NaNO3), in the acidic pH range, at different temperatures.

2011

AbstractThe hydrolysis of Al3+ was studied in aqueous 1 mol L−1 NaNO3 solution at different concentrations (20–200 mmol L−1) and temperatures (283.15–343.15 K) by potentiometry (ISE-H+, glass electrode). Many different speciation models were considered in the calculations and it was found that the best model is represented by the following species: Al(OH)2+, Al(OH)45+, Al13(OH)327+. Hydrolysis constants and enthalpy changes at different temperatures are reported.

Chemical Health and SafetyAqueous solutionChemistryHealth Toxicology and Mutagenesismedia_common.quotation_subjectEnthalpyInorganic chemistryToxicologyGlass electrodelaw.inventionSpeciationHydrolysislawMolePh rangealuminium(III) speciation hydrolysis constants hydrolysis enthalpy changesSettore CHIM/01 - Chimica Analiticamedia_commonAluminium(III) speciation; Hydrolysis constants; Hydrolysis enthalpy changes
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Exploiting seeding of random number generators for efficient domain decomposition parallelization of dissipative particle dynamics

2013

Abstract Dissipative particle dynamics (DPD) is a new promising method commonly used in coarse-grained simulations of soft matter and biomolecular systems at constant temperature. The DPD thermostat involves the evaluation of stochastic or random forces between pairs of neighboring particles in every time step. In a parallel computing environment, the transfer of these forces from node to node can be very time consuming. In this paper we describe the implementation of a seeded random number generator with three input seeds at each step which enables the complete generation of the pairwise stochastic forces in parallel DPD simulations with minimal communication between nodes.

Chemical substanceRandom number generationDissipative particle dynamicsGeneral Physics and AstronomyDomain decomposition methodsParallel computingThermostatlaw.inventionHardware and ArchitecturelawNode (circuits)Pairwise comparisonConstant (mathematics)MathematicsComputer Physics Communications
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Ab initio modelling of the effects of varying Zr (Ti) concentrations on the atomic and electronic properties of stoichiometric PZT solid solutions

2017

Abstract Lead zirconate titanate Pb(ZrxTi1−x)O3 solid solution is considered as one of the most advanced ferroelectric and piezoelectric materials. Consequent variation of Zr (Ti) concentrations significantly affects the atomic and electronic properties of PZT structures. To perform ab initio modelling of different morphologies for lead zirconate titanate, we are using approach of hybrid density functional B3PW as implemented in CRYSTAL14 computer code. In this study, we are performing large-scale calculations of such PZT parameters as optimized lattice constants, atomic charges and bond populations, as well as band structure (e.g., band gap) and density of states.

ChemistryBand gapAb initioAnalytical chemistry02 engineering and technology021001 nanoscience & nanotechnologyCondensed Matter PhysicsLead zirconate titanate01 natural sciencesBiochemistryFerroelectricityComputer Science::OtherCondensed Matter::Materials Sciencechemistry.chemical_compoundLattice constantComputational chemistry0103 physical sciencesDensity of statesPhysical and Theoretical Chemistry010306 general physics0210 nano-technologyElectronic band structureSolid solutionComputational and Theoretical Chemistry
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Generalized transport coefficients in a gas with large shear rate

1987

We get a solution of the Bhatnagar-Gross-Krook (BGK) model kinetic equation by means of a perturbative expansion of a temperature gradient to study the transport properties in a gas with large shear rate. The irreversible fluxes are evaluated exactly to first order in the expansion for Maxwell molecules. The transport coefficients obtained are highly nonlinear functions of the shear rate. This dependence on shear rate is analysed and compared with previous results for several transport coefficients. Finally, we have found a solution for a simple model of constant collision frequency for which a large shear rate coexists with an arbitrary temperature gradient.

ChemistryBiophysicsThermodynamicsMechanicsCondensed Matter PhysicsFirst orderPhysics::Fluid DynamicsShear rateSimple shearNonlinear systemTemperature gradientCollision frequencyKinetic equationsPhysical and Theoretical ChemistryConstant (mathematics)Molecular BiologyMolecular Physics
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A theoretical and experimental study of the formation mechanism of 4-X-chalcones by the Claisen–Schmidt reaction

2000

Abstract A theoretical and experimental study on the formation of 4-X-chalcones (X=H, Cl, F, OCH3, N(CH3)2) was carried out by the Claisen–Schmidt reaction. The influence of pH and temperature was analyzed. Under the adopted experimental conditions 4-X-chalcones were the only reaction products. In the theoretical study, the thermodynamic magnitudes and the reactivity indexes calculated with the AM1 method were used. The mechanism of Nayak and Rout was analyzed critically and a new mechanism was proposed, characterized by: (1) rapid nucleophilic attack of the catalyst (OH−) on the carbon atom of the methyl group of acetophenone; (2) attacks of the acetophenonate ion on the carbon atom of the…

ChemistryCondensed Matter PhysicsBiochemistryReaction rateElimination reactionchemistry.chemical_compoundReaction rate constantNucleophileComputational chemistrySchmidt reactionReactivity (chemistry)Physical and Theoretical ChemistryEquilibrium constantMethyl groupJournal of Molecular Structure: THEOCHEM
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Photocatalytic degradation of 4-Nitrophenol by g-C3N4-MCy: Mechanism study and kinetic modeling

2021

Abstract A graphitic carbon nitride (g-C3N4-MCy) photocatalyst was prepared by thermal condensation of melamine and cyanuric acid with equal proportions. The photocatalyst was characterized by Fourier transform infrared spectroscopy (FTIR), Specific surface area (SSA), X-ray diffraction (XRD), Field Emission Scanning Electron Microscope (FESEM), Transmission electron microscope (TEM), and DRS–UV–Vis spectroscopic methods. We studied the photo-degradation kinetics of 4-nitrophenol using a g-C3N4-MCy. Four parameters were applied including initial concentration of 4-nitrophenol, amount of catalyst, dissolved oxygen content, and photon flux. The reaction rate constant was shown to be correlate…

ChemistryGeneral Chemical EngineeringGraphitic carbon nitrideAnalytical chemistryGeneral Physics and Astronomy02 engineering and technologyGeneral Chemistry010402 general chemistry021001 nanoscience & nanotechnology01 natural sciences0104 chemical sciencesCatalysischemistry.chemical_compoundReaction rate constantSpecific surface areaPhotocatalysisFourier transform infrared spectroscopy0210 nano-technologyCyanuric acidMelamineJournal of Photochemistry and Photobiology A: Chemistry
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