Search results for "CST"
showing 10 items of 81 documents
Pairwise DNA Sequence Alignment Optimization
2015
This chapter presents a parallel implementation of the Smith-Waterman algorithm to accelerate the pairwise alignment of DNA sequences. This algorithm is especially computationally demanding for long DNA sequences. Parallelization approaches are examined in order to deeply explore the inherent parallelism within Intel Xeon Phi coprocessors. This chapter looks at exploiting instruction-level parallelism within 512-bit single instruction multiple data instructions (vectorization) as well as thread-level parallelism over the many cores (multithreading using OpenMP). Between coprocessors, device-level parallelism through the compute power of clusters including Intel Xeon Phi coprocessors using M…
A Note on Keys and Keystreams of Chacha20 for Multi-key Channels
2018
In this paper we analyze the keystreams generated by the Chacha20 stream cipher. We also compare these to the ones generated by its predecessor, the RC4 stream cipher. Due to the proposed multi-key channels in the upcoming TLS 1.3 standard we analyze the behavior of the keystream in the boundary case where there is a single bit difference between two keys used for the initiation of the stream cipher algorithms. The goal is to check whether a single bit change in the key has any predictable influence on the bits of the keystream output.
Versatile Direct and Transpose Matrix Multiplication with Chained Operations: An Optimized Architecture Using Circulant Matrices
2016
With growing demands in real-time control, classification or prediction, algorithms become more complex while low power and small size devices are required. Matrix multiplication (direct or transpose) is common for such computation algorithms. In numerous algorithms, it is also required to perform matrix multiplication repeatedly, where the result of a multiplication is further multiplied again. This work describes a versatile computation procedure and architecture: one of the matrices is stored in internal memory in its circulant form, then, a sequence of direct or transpose multiplications can be performed without timing penalty. The architecture proposes a RAM-ALU block for each matrix c…
Mutations in CTC1, encoding conserved telomere maintenance component 1, cause Coats plus
2012
Coats plus is a highly pleiotropic disorder particularly affecting the eye, brain, bone and gastrointestinal tract. Here, we show that Coats plus results from mutations in CTC1, encoding conserved telomere maintenance component 1, a member of the mammalian homolog of the yeast heterotrimeric CST telomeric capping complex. Consistent with the observation of shortened telomeres in an Arabidopsis CTC1 mutant and the phenotypic overlap of Coats plus with the telomeric maintenance disorders comprising dyskeratosis congenita, we observed shortened telomeres in three individuals with Coats plus and an increase in spontaneous γ 3H2AX-positive cells in cell lines derived from two affected individual…
Diffusion tensor imaging in amyotrphic lateral sclerosis: quantitative assesment ot the corticospinal tract degeneration.
2007
Poster for European Society of NeuroRadiology. Genoa, 20-23 September 2007
Imaging del tensore di diffusione nella SLA: esperienza preliminare nella valutazione della degenerazione dei FCS.
2008
Comunicazione orale per il Congresso nazionale SIRM. Roma, 23-27 maggio 2008
The sludge dewaterability in advanced wastewater treatment: a survey of four different Membrane BioReactor pilot plants
2017
The wasted activated sludge dewaterability represents a major concern for Wastewater Treatment Plants (WWTPs) managers. Indeed, whereas the dewatered sludge could represents a re-usable matrix, the principal drawback related to the wasted sludge dewaterability is the high water content due to the presence of extracellular polymeric substances (EPS) that allow the trapping of water molecules within the bio sludge flocs. In order to provide an outlook of the dewaterability features of activated sludge derived from advanced WWTP, the present research reports a long term survey (over two years) aimed at assessing the principal dewaterability parameters of the sludge wasted from different Membra…
Balls into non-uniform bins
2014
Balls-into-bins games for uniform bins are widely used to model randomized load balancing strategies. Recently, balls-into-bins games have been analysed under the assumption that the selection probabilities for bins are not uniformly distributed. These new models are motivated by properties of many peer-to-peer (P2P) networks, which are not able to perfectly balance the load over the bins. While previous evaluations try to find strategies for uniform bins under non-uniform bin selection probabilities, this paper investigates heterogeneous bins, where the "capacities" of the bins might differ significantly. We show that heterogeneous environments can even help to distribute the load more eve…
Polynomial method to study the entanglement of pure N-qubit states
2009
We present a mapping which associates pure N-qubit states with a polynomial. The roots of the polynomial characterize the state completely. Using the properties of the polynomial we construct a way to determine the separability and the number of unentangled qubits of pure N-qubit states.
Rewarding effects of 3,4-methylenedioxymethamphetamine (“Ecstasy”) in dominant and subordinate OF-1 mice in the place preference conditioning paradigm
2006
We tested the ability of 3,4-methylenedioxymethamphetamine (MDMA) to induce conditioned place preference (CPP) in dominant and subordinate OF-1 mice subjected to cohabitation and repeated sessions of agonistic confrontation, as well as in non-confronted mice. We selected doses of MDMA (2, 6, 10 mg/kg) previously reported to induce CPP in mice and we measured expression of c-Fos evoked by the treatments in non-confronted mice. MDMA induced c-Fos protein in several corticolimbic regions involved in drug-induced reward. Mice were exposed to brief sessions of agonistic confrontation on 5 consecutive days. Determinations of circulating hormones and drug conditioning tests were carried out on com…