Search results for "Caryophyllaceae"

showing 10 items of 36 documents

Simultaneous speciation in the European high mountain flowering plant genus Facchinia (Minuartia s.l., Caryophyllaceae) revealed by genotyping-by-seq…

2017

Understanding the relative importance of different mechanisms of speciation in a given lineage requires fully resolved interspecific relationships. Using Facchinia, a genus of seven species centred in the European Alps, we explore whether the polytomy found by Sanger sequencing analyses of standard nuclear (ITS) and plastid markers (trnQ-rps16) is a hard or soft polytomy by substantially increasing the amount of DNA sequence data, generated by genotyping-by-sequencing. In comparison to 142 phylogenetically informative sites in the Sanger sequences the GBS sequences yielded 3363 phylogenetically informative sites after exclusion of apparently oversaturated SNPs. Maximum parsimony, maximum li…

0106 biological sciences0301 basic medicinePolytomyDNA PlantGenotypeGenetic SpeciationLineage (evolution)CaryophyllaceaeBiology010603 evolutionary biology01 natural sciencesCoalescent theoryEvolution Molecular03 medical and health sciencessymbols.namesakePhylogeneticsGeneticsPlastidsMolecular BiologyPhylogenyEcology Evolution Behavior and SystematicsGeneticsSanger sequencingPhylogenetic treeSequence Analysis DNAMaximum parsimony030104 developmental biologyMolecular phylogeneticssymbolsHybridization GeneticMolecular Phylogenetics and Evolution
researchProduct

Fine-scale spatial genetic structure and gene dispersal in Silene latifolia

2010

Plants are sessile organisms, often characterized by limited dispersal. Seeds and pollen are the critical stages for gene flow. Here we investigate spatial genetic structure, gene dispersal and the relative contribution of pollen vs seed in the movement of genes in a stable metapopulation of the white campion Silene latifolia within its native range. This short-lived perennial plant is dioecious, has gravity-dispersed seeds and moth-mediated pollination. Direct measures of pollen dispersal suggested that large populations receive more pollen than small isolated populations and that most gene flow occurs within tens of meters. However, these studies were performed in the newly colonized rang…

0106 biological sciencesGene FlowChloroplast DnaPollinationSeed dispersalSeed dispersalHadena-Bicrurismedicine.disease_causeGenes Plant010603 evolutionary biology01 natural sciences03 medical and health sciencesPollinatorPollenGeneticsmedicineSilene latifoliaSileneGenetics (clinical)030304 developmental biologyIsolation by distance2. Zero hunger0303 health sciences[SDV.GEN.GPO]Life Sciences [q-bio]/Genetics/Populations and Evolution [q-bio.PE]biologyEcologyta1184Plant-population sizeGenetic Variationfood and beveragesbiology.organism_classificationY-ChromosomeDioica CaryophyllaceaeGynodioecious plantF-StatisticsGenetic structureSeedsPollen dispersalta1181Biological dispersalPollenAutocorrelation analysisOriginal ArticleMicrosatellite Repeats
researchProduct

A conspectus of the genus Cherleria (Minuartia s.l., Caryophyllaceae)

2017

Abstract: Minuartia s.l. (Caryophyllaceae) is polyphyletic, with its species belonging to eleven major clades, all of which have been recognized at the generic rank. Cherleria is one of these segregate genera, based on the Linnaean species Cherleria sedoides. Its centre of diversity is on the Balkan Peninsula, but species also occur in the European and North American high mountains and in the Arctic. The species of Cherleria show ecological, especially substrate, differentiation and multiple colonisations of alpine habitats. We make new combinations for the 17 (of 20) taxa in Cherleria that do not yet have Cherleria names and provide a key to all species of the genus. Citation: Moore A. J. …

0106 biological sciencesbiologyEcologyWilldenowiaCaryophyllaceaePlant Sciencebiology.organism_classification010603 evolutionary biology01 natural sciencesTaxonGenusMinuartiaPolyphylyBotanyTaxonomy (biology)NomenclatureEcology Evolution Behavior and Systematics010606 plant biology & botanyWilldenowia
researchProduct

Unusual oleanane-type saponins from Arenaria montana

2010

Three oleanane-type saponins, 3-O-β-d-glucopyranosylechinocystic acid 28-O-β-d-xylopyranosyl-(1→4)-[α-l-rhamnopyranosyl-(1→2)]-α-l-rhamnopyranosyl ester (1), 3-O-β-d-glucopyranosylechinocystic acid 28-O-α-l-arabinopyranosyl-(1→3)-β-d-xylopyranosyl-(1→4)-[α-l-rhamnopyranosyl-(1→2)]-α-l-rhamnopyranosyl ester (2), 3-O-β-d-glucopyranosylcaulophyllogenin 28-O-β-d-apiofuranosyl-(1→3)-β-d-xylopyranosyl-(1→4)-[β-d-apiofuranosyl-(1→3)]-α-l-rhamnopyranosyl-(1→2)-α-l-rhamnopyranosyl ester (3) were isolated from the whole plant of Arenaria montana. Their unusual structures for the Caryophyllaceae family were established mainly by 2D NMR techniques and mass spectrometry.

Arenaria montanaMagnetic Resonance SpectroscopyStereochemistryChemical structureArenaria PlantSaponinCaryophyllaceaeAntineoplastic AgentsPlant ScienceHorticultureMass spectrometryBiochemistryMass Spectrometrychemistry.chemical_compoundCell Line TumorBotanyHumansOleanolic AcidMolecular BiologyOleananeCell Proliferationchemistry.chemical_classificationDose-Response Relationship DrugMolecular StructurebiologyStereoisomerismGeneral MedicineSaponinsbiology.organism_classificationchemistryDrug Screening Assays AntitumorEchinocystic acidTwo-dimensional nuclear magnetic resonance spectroscopyPhytochemistry
researchProduct

Sulfated Lupane Triterpene Derivatives and a Flavone C-Glycoside from Gypsophila repens

2007

A new sulfated lupane triterpene, Gypsophilin (1), and its glucosyl ester, Gypsophilinoside (2) were isolated from the roots of Gypsophila repens whereas a new flavone C-glycoside (3) was obtained from the aerial parts. Their structures were established as (3beta)-3-O-(sulfo)lup-20(29)-en-23,28-dioic acid (1), (3beta)-3-O-(sulfo)lup-20(29)-en-23,28-dioic acid -28-O-beta-D-glucopyranosyl ester (2) and luteolin-7-O-alpha-L-arabinopyranosyl-6-C-beta-glucopyranoside (3) by spectroscopic methods such as 1D and 2D NMR, HR-ESI-MS and FAB-MS.

C glycosidesSpectrometry Mass Electrospray IonizationMagnetic Resonance SpectroscopySpectrophotometry InfraredStereochemistrySaponinCaryophyllaceaeCaryophyllaceaeSpectrometry Mass Fast Atom BombardmentSulfuric Acid EstersPlant RootsTerpeneSulfationTriterpeneDrug DiscoveryGlycosidesGypsophilinosidechemistry.chemical_classificationbiologyPlant ExtractsChemistryHydrolysisGypsophila repensGeneral ChemistryGeneral MedicineSaponinsbiology.organism_classificationTriterpenesSpectrophotometry UltravioletTwo-dimensional nuclear magnetic resonance spectroscopyGypsophilinChemical and Pharmaceutical Bulletin
researchProduct

Maximum polyphyly: Multiple origins and delimitation with plesiomorphic characters require a new circumscription of Minuartia (Caryophyllaceae)

2014

Character evolutionCircumscriptionMinuartiaPolyphylyBotanyMinuartia dichotomaCaryophyllaceaePlant ScienceBiologybiology.organism_classificationEcology Evolution Behavior and SystematicsTAXON
researchProduct

Junceosides A-C, new triterpene saponins from Arenaria juncea.

2002

Three novel triterpenoid saponins, junceosides A (1), B (2), and C (3), together with two known saponins have been isolated from the roots of Arenaria juncea. Their structures were elucidated using a combination of homo- and heteronuclear 2D NMR techniques (COSY, TOCSY, NOESY, HSQC, and HMBC) and by FABMS. The new compounds were characterized as 3-O-alpha-L-arabinopyranosyl-(1-->2)-[beta-D-galactopyranosyl-(1-->3)]-beta-D-glucuronopyranosylgypsogenin-28-O-beta-D-glucopyranosyl(1-->3)-[beta-D-xylopyranosyl-(1-->4)]-alpha-L-rhamnopyranosyl-(1-->2)-beta-D-fucopyranoside (1), 3-O-alpha-L-arabinopyranosyl-(1-->2)-[beta-D-galactopyranosyl-(1-->3)]-beta-D-glucuronopyranosylgypsogenin-28-O-beta-D-x…

Chemical PhenomenaSpectrophotometry InfraredStereochemistrySaponinPharmaceutical ScienceCaryophyllaceaeUronic acidPlant RootsAnalytical Chemistrychemistry.chemical_compoundTriterpeneDrug DiscoveryTetrasaccharideTrisaccharideOleanolic AcidPharmacologychemistry.chemical_classificationPlants MedicinalMolecular StructureChemistry PhysicalHydrolysisOrganic ChemistrySaponinsTriterpenesXylosideComplementary and alternative medicinechemistryHeteronuclear moleculeMolecular MedicineChromatography Thin LayerTwo-dimensional nuclear magnetic resonance spectroscopyDrugs Chinese HerbalJournal of natural products
researchProduct

An AFLP clock for the absolute dating of shallow-time evolutionary history based on the intraspecific divergence of southwestern European alpine plan…

2009

The dating of recent events in the history of organisms needs divergence rates based on molecular fingerprint markers. Here, we used amplified fragment length polymorphisms (AFLPs) of three distantly related alpine plant species co-occurring in the Spanish Sierra Nevada, the Pyrenees and the southwestern Alps/Massif Central to establish divergence rates. Within each of these species (Gentiana alpina, Kernera saxatilis and Silene rupestris), we found that the degree of AFLP divergence (D(N72)) between mountain phylogroups was significantly correlated with their time of divergence (as inferred from palaeoclimatic/palynological data), indicating constant AFLP divergence rates. As these rates d…

DNA PlantAlpine plantPopulationCaryophyllaceaeIntraspecific competitionDivergenceEvolution MolecularSpecies SpecificityGeneticsVicarianceGentianaAmplified Fragment Length Polymorphism AnalysiseducationEcology Evolution Behavior and SystematicsEcosystemPhylogenyeducation.field_of_studybiologyModels GeneticEcologySequence Analysis DNAPlantsbiology.organism_classificationSilene rupestrisEuropeGenetics PopulationMinuartiaBrassicaceaeMutationRegression AnalysisAmplified fragment length polymorphismMolecular ecology
researchProduct

Typification of 14 names in the Dianthus virgineus group (Caryophyllaceae)

2021

The nomenclature of 14 taxa from Central and Southern Europe within the Dianthus virgineus group is discussed. Dianthus aggericola Jord., D. collivagus Jord., D. consimilis Jord., D. orophilus Jord., D. saxicola Jord., D. juratensis Jord. are here lectotypified by specimens from the Jordan herbarium in LY, while D. godronianus Jord. by a specimen in P. Dianthus subacaulis Vill. is neotypified by a specimen collected on Mont Ventoux (S. France) and housed in MPU. For D. sylvestris Wulfen, a lectotype is here designated and its previous neotypification is discussed. Dianthus caryophyllus var. tenuifolius Moris, D. caryophyllus f. minor Moris and D. sylvestris var. garganicus Ten. are lectotyp…

Dianthus France Italy Slovenia NomenclatureSettore BIO/02 - Botanica SistematicaSouthern Europe and MediterraneanSloveniaBotanyCaryophyllaceaePlant ScienceSpecies InventoriesBiotaCaryophyllalesEuropeTracheophytaMagnoliopsidaItalyDianthusQK1-989nomenclatureFrancePlantaeDianthus humilisEcology Evolution Behavior and SystematicsDianthus; France; Italy; Slovenia; nomenclatureResearch ArticlePhytoKeys
researchProduct

Genetic Diversity of Pathogenic and Nonpathogenic Populations of Fusarium oxysporum Isolated from Carnation Fields in Argentina.

2004

In order to elucidate the origin of Fusarium oxysporum f. sp. dianthi in Argentina, the genetic diversity among pathogenic isolates together with co-occurring nonpathogenic isolates on carnation was investigated. In all, 151 isolates of F. oxysporum were obtained from soils and carnation plants from several horticultural farms in Argentina. The isolates were characterized using vegetative compatibility group (VCG), intergenic spacer (IGS) typing, and pathogenicity tests on carnation. Seven reference strains of F. oxysporum f. sp. dianthi also were analyzed and assigned to six different IGS types and six VCGs. Twenty-two Argentinean isolates were pathogenic on carnation, had the same IGS typ…

FusariumGenetic diversitybiologyCaryophyllaceaegenetic diversityPlant ScienceCarnationFungi imperfectibiology.organism_classificationPathogenicity[SDV.BV.PEP]Life Sciences [q-bio]/Vegetal Biology/Phytopathology and phytopharmacyFusariumFusarium oxysporumBotanyCiencias AgrariasAgronomy and Crop ScienceDIANTHI[SDV.BV.PEP] Life Sciences [q-bio]/Vegetal Biology/Phytopathology and phytopharmacyPhytopathology
researchProduct