Search results for "Cell-Free System"

showing 10 items of 44 documents

Enzymatic and pharmacokinetic studies on the metabolism of branched chain alpha-keto acids in the rat.

1983

Michaelis-constants and enzyme activities for dehydrogenation and transamination of the three branched chain alpha-keto acids in liver, kidney, skeletal muscle, and brain of rats are reported. After oral load only 11-22% of the keto acids pass the liver unchanged. Blood levels in pharmacokinetic and absorption studies are related to the Michaelis-constants. At the low keto-acid concentrations after oral application, dehydrogenation in the non-hepatic tissues is supposed to prevail over transamination. Data on feed efficiency of branched chain alpha-keto acids reported in the literature support this view. The chance for transamination is better after intravenous administration. The transfera…

MaleStereochemistryTransaminationMedicine (miscellaneous)Mitochondria LiverKidneyBiochemistryHemiterpenesPharmacokineticsmedicineAnimalsDehydrogenationTransaminases3-methyl-2-oxobutyratechemistry.chemical_classificationKidneyCell-Free SystemSkeletal muscleBrainRats Inbred StrainsMetabolismKeto AcidsMitochondriaMitochondria MuscleRatsKineticsmedicine.anatomical_structureEnzymeBiochemistrychemistryOxidoreductasesFood ScienceZeitschrift fur Ernahrungswissenschaft
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Decellularized tracheal prelamination implant: A proposed bilateral double organ technique

2021

Introduction In tracheal replacement transplantation, prelamination is a critical stage. Nowadays, the most widely used prelamination technique is the prethoracic fascia flap with lateral thoracic artery. We propose a flap based on the internal thoracic artery, which allows a relatively non-aggressive double organ implant, and we have tested its efficacy in decellularized tracheas. Material and methods Tracheas of albino New Zealand rabbits were decellularized following a protocol that uses detergents and cryogenization, sterilized with 1kGy gamma radiation and tutorized with a stent. Bilateral pedicled flaps made of pectoral fascia and a muscular component were harvested through a longitud…

Malemedicine.medical_specialtyBiomedical EngineeringMedicine (miscellaneous)BioengineeringInternal thoracic arteryBiomaterialsmedicine.arterymedicineAnimalsTransplantation HomologousBioprosthesisDecellularizationCell-Free SystemTissue EngineeringLateral thoracic arterybusiness.industryGeneral MedicineFasciaPedicled FlapSurgeryTracheaTransplantationairway animal immune tolerance models tissue engineering trachea transplantsmedicine.anatomical_structureRabbitsImplantbusinessPectoral fasciaArtificial Organs
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Stability of chitin synthetase in cell-free preparations of a wild-type strain and a 'slime' variant of Neurospora crassa.

1991

Chitin synthetase activity in cell-free preparations from a wild-type strain and a 'slime' variant of Neurospora crassa was monitored over many days in samples stored at 0 degrees C. Total activity in whole-cell-free extracts and low-speed supernatants from both organisms was very unstable, losing more than 90% of the initial activity on storage at 0 degrees C for 96 h. Chitin synthetase detection was not masked by chitinase activity present in the preparations. Gel-filtration chromatography of these preparations increased the stability of the activity from the 'slime' variant, whereas removal of particulate structures by high-speed centrifugation stabilized the chitin synthetase activity i…

MicrobiologyCell-free systemMicrobiologyNeurospora crassachemistry.chemical_compoundChitinEnzyme StabilityGeneticsCentrifugationMolecular Biologychemistry.chemical_classificationChitin SynthasebiologyCell-Free SystemNeurospora crassafungiWild typeGenetic VariationChitin synthasebiology.organism_classificationcarbohydrates (lipids)KineticsEnzymechemistryBiochemistryChitinasebiology.proteinFEMS microbiology letters
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Determination of enrichment factors for modified RNA in MeRIP experiments

2019

In the growing field of RNA modification, precipitation techniques using antibodies play an important role. However, little is known about their specificities and protocols are missing to assess their effectiveness. Here we present a method to assess enrichment factors after MeRIP-type pulldown experiments, here exemplified with a commercial antibody against N6-methyladenosine (m6A). Testing different pulldown and elution conditions, we measure enrichment factors of 4-5 using m6A-containing mRNAs against an unmodified control of identical sequence. Both types of mRNA carry 32P labels at different nucleotides, allowing their relative quantification in a mixture after digestion to nucleotides…

Models MolecularAdenosineAbsolute quantificationMethylationProtein Structure SecondaryGeneral Biochemistry Genetics and Molecular BiologyViral Proteins03 medical and health sciencesAdenosine TriphosphateRNA modificationEscherichia coliHumansImmunoprecipitationProtein Interaction Domains and MotifsNucleotideRNA MessengerMolecular Biology030304 developmental biologychemistry.chemical_classification0303 health sciencesMessenger RNACell-Free SystemChemistryElution030302 biochemistry & molecular biologyRNADNA-Directed RNA PolymerasesBiochemistryImmunoglobulin GIsotope LabelingChromatography Thin LayerPhosphorus RadioisotopesProtein BindingMethods
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Phenylpropanoid and phenylisoprenoid metabolites from Asteraceae species as inhibitors of protein carbonylation.

2011

Abstract Three phenolic antioxidant and anti-inflammatory compounds: 7-methylaromadendrin, isoprenylhydroquinone glucoside, and 3.5-dicaffeoylquinic acid methyl ester, all isolated from Western Mediterranean Asteraceae species, have been studied for their inhibitory activity against protein carbonylation, a harmful post-translational modification of peptide chains associated with degenerative diseases. All compounds have proven to be effective, with 50% inhibitory concentration (IC 50 ) values in the micromolar range, against bovine serum albumin carbonylation caused by hypochlorite, peroxynitrite, and phorbol ester-induced leukocyte oxidative burst.

NeutrophilsProtein CarbonylationLeukocyte oxidative burstHypochloritePlant ScienceHorticultureAsteraceaeBiochemistryAntioxidantsProtein Carbonylationchemistry.chemical_compoundInhibitory Concentration 50GlucosideGlucosidesPhenolsPeroxynitrous AcidPhorbol EstersHumansBovine serum albuminMolecular BiologyRespiratory BurstFlavonoidsbiologyPhenylpropanoidCell-Free SystemSerum Albumin BovineGeneral MedicineHydroquinonesHypochlorous AcidchemistryBiochemistryFlavanonesbiology.proteinChlorogenic AcidCarbonylationProtein Processing Post-TranslationalPeroxynitritePhytochemistry
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Antifungal Activity of Biocontrol Agents In Vitro and Potential Application to Reduce Mycotoxins (Aflatoxin B1 and Ochratoxin A)

2021

Food bio-preservatives are requested as substituents of chemical pesticides in food. The aim of this study was to carry out a screening of twenty biocontrol agents (BCAs) for their potential fungicidal activity in vitro. Twenty BCAs were tested against ten pathogenic fungi. Some of the cell-free supernatants (CFS) tested showed in vitro antifungal activity versus pathogenic fungi. The highest fungicidal activity was observed in the fermented CFS of Paenibacillus chibensis CECT 375, Bacillus amyloliquefaciens CECT 493, and Pantoea agglomerans CECT 850, which showed a minimum inhibitory concentration (MIC) and minimum fungicidal concentration (MFC) values of 125 and 250 g/L, respectively. The…

Ochratoxin AAflatoxinAflatoxin B1Antifungal AgentsBacillus amyloliquefaciensPaenibacillus alveiHealth Toxicology and Mutagenesisved/biology.organism_classification_rank.speciesreductionIn Vitro TechniquesToxicologyArticlePoisonsbiocontrol agentschemistry.chemical_compoundMinimum inhibitory concentrationBacillus amyloliquefaciensmycotoxinsFood sciencePest Control BiologicalMycotoxinbio-preservationCell-Free SystembiologyPantoeaved/biologyRfood and beveragesin vitrobiology.organism_classificationOchratoxinsPantoea agglomeransFungicides IndustrialchemistryMedicinePaenibacillus polymyxaPaenibacillusantifungalToxins
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Energy-Linked Reactions Catalyzed by the Purified ATPase Complex (F0F1) from Rhodospirillum rubrum Chromatophores

1980

1. The isolation of the F0F1-ATPase complex from Rhodospirillum rubrum chromatophores by the use of taurodeoxycholate is described. 2. The enzyme preparation contains about 12 polypeptides; five are subunits of the F1 moiety. 3. The ATPase activity of the purified enzyme is dependent on the addition of phospholipids. 4. Km-vales for Mg2+-ATP and Ca2+-ATP are similar to the values obtained for the membrane-bound enzyme. 5. The F0F1-ATPase complex is more than 70% inhibited by oligomycin and N,N′-dicyclohexyl-carbodiimide. 6. The F0F1-ATPase complex was integrated into liposomes. The reconstituted proteoliposomes catalyzed energy transduction as shown by ATP-dependent quenching of acridine dy…

OligomycinMacromolecular SubstancesBiologyRhodospirillum rubrumBiochemistryFluorescenceMembrane Lipidschemistry.chemical_compoundAdenosine TriphosphateMoietyAdenosine Triphosphataseschemistry.chemical_classificationLiposomeQuenching (fluorescence)Cell-Free SystemUncoupling AgentsATPase complexRhodospirillum rubrumMembrane ProteinsBacterial Chromatophoresbiology.organism_classificationFluorescenceMolecular WeightEnzymeSolubilitychemistryBiochemistryLiposomesEuropean Journal of Biochemistry
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Photochemical and photobiological studies with acridine and phenanthridine hydroperoxides in cell-free DNA.

1997

The acridine and phenanthridine hydroperoxides 3 and 7 were synthesized as photochemical hydroxyl radical sources for oxidative DNA damage studies. The generation of hydroxyl radicals upon UVA irradiation (lambda = 350 nm) was verified by trapping experiments with 5,5-dimethyl-1-pyrroline N-oxide and benzene. The enzymatic assays of the damage in cell-free DNA from bacteriophage PM2 caused by the acridine and phenanthridine hydroperoxides 3 and 7 under near-UVA irradiation revealed a wide range of DNA modifications. Particularly, extensive single-strand break formation and DNA base modifications sensitive to formamidopyrimidine DNA glycosylase (Fpg protein) were observed. In the photooxidat…

PhenanthridineCell-Free SystemDNA damageDNA SuperhelicalHydroxyl RadicalPhotochemistryUltraviolet RaysRadicalGeneral MedicineFormamidopyrimidine DNA glycosylasePhotochemistryBiochemistryPhotoinduced electron transferPeroxidesCyclic N-Oxideschemistry.chemical_compoundchemistryAcridineHydroxyl radicalSpin LabelsPhysical and Theoretical ChemistryOxidation-ReductionDNADNA DamagePhotochemistry and photobiology
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PRK1 phosphorylates MARCKS at the PKC sites: serine 152, serine 156 and serine 163

1996

AbstractThe 80kDa Myristolated Alanine-Rich C-Kinase Substrate (MARCKS) in a major in vivo substrate of protein kinase C (PKC). Here we report that MARCKS is a major substrate for the lipid-activated PKC-related kinase (PRK1) in cell extracts. Furthermore, PRK1 is shown to phosphorylate MARCKS on the same sites as PKC in vitro. Thus, control of MARCKS phosphorylation on these previously identified ‘PKC’ sites may be regulated under certain circumstances by PRK as well as PKC mediated signalling pathways. The implications for MARCKS as a marker of PKC activation and as a point of signal convergence are discussed.

PhosphopeptidesMARCKSPRKRecombinant Fusion ProteinsMolecular Sequence DataBiophysicsKidneyBiochemistryCell-free systemCell LineSerineStructural BiologyProtein kinase CGeneticsAnimalsAmino Acid SequenceBinding siteMARCKSPKCPhosphorylationMyristoylated Alanine-Rich C Kinase SubstrateMolecular BiologyProtein kinase CGlutathione TransferaseBinding SitesCell-Free SystemKinaseChemistryIntracellular Signaling Peptides and ProteinsMembrane ProteinsProteinsCell BiologyHaplorhiniPeptide FragmentsBiochemistryPhosphorylationElectrophoresis Polyacrylamide GelSignal transductionSequence AnalysisSignal TransductionFEBS Letters
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Photochemical and Photobiological Studies of a Furonaphthopyranone as a Benzo-spaced Psoralen Analog in Cell-free and Cellular DNA

1997

Photobiological activities of the benzo-spaced psoralen analog furonaphthopyranone 3 have been investigated in cell-free and cellular DNA. The molecular geometry parameters of 3 suggest that it should not form interstrand crosslinks with DNA. With cell-free DNA no evidence for crosslinking but also not for monoadduct formation was obtained; rather, the unnatural furocoumarin 3 induces oxidative DNA modifications under near-UVA irradiation. The enzymatic assay of the photosensitized damage in cell-free PM2 DNA revealed the significant formation of lesions sensitive to formamidopyrimidine DNA glycosylase (Fpg protein). In the photooxidation of calf thymus DNA by the furonaphthopyranone 3, 0.2…

PhotochemistryUltraviolet RaysDNA damageMolecular ConformationCHO CellsPhotochemistryBiochemistryOxazolonechemistry.chemical_compoundCricetinaeFurocoumarinsAnimalsDeoxyguanosinePhysical and Theoretical ChemistryPsoralenPhotosensitizing AgentsCell-Free SystemMolecular StructureMutagenicity TestsFurocoumarinFicusinDeoxyguanosineDNAGeneral MedicineFormamidopyrimidine DNA glycosylaseComet assaychemistryDNA ViralMethoxsalenCattleDNADNA DamagePhotochemistry and Photobiology
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