Search results for "Circadian clock"

showing 10 items of 57 documents

How is the inner circadian clock controlled by interactive clock proteins?

2015

AbstractMost internationally travelled researchers will have encountered jetlag. If not, working odd hours makes most of us feel somehow dysfunctional. How can all this be linked to circadian rhythms and circadian clocks? In this review, we define circadian clocks, their composition and underlying molecular mechanisms. We describe and discuss recent crystal structures of Drosophila and mammalian core clock components and the enormous impact they had on the understanding of circadian clock mechanisms. Finally, we highlight the importance of circadian clocks for the daily regulation of human/mammalian physiology and show connections to overall fitness, health and disease.

Drosophila and mammalian clock proteinCircadian rhythmCircadian clock mechanismProtein ConformationCircadian clockBiophysicsCLOCK Proteins3D crystal structureCell BiologyBiologyBiochemistryBacterial circadian rhythmsCell biologyStructural BiologyCircadian ClocksGeneticsAnimalsHumansCLOCK ProteinsCircadian rhythmOscillating geneMolecular BiologyNeuroscienceFEBS Letters
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How Many Clocks, How Many Times? On the Sensory Basis and Computational Challenges of Circadian Systems

2018

A vital task for every organism is not only to decide what to do but also when to do it. For this reason, “circadian clocks” have evolved in virtually all forms of life. Conceptually, circadian clocks can be divided into two functional domains; an autonomous oscillator creates a ~24 h self-sustained rhythm and sensory machinery interprets external information to alter the phase of the autonomous oscillation. It is through this simple design that variations in external stimuli (for example, daylight) can alter our sense of time. However, the clock’s simplicity ends with its basic concept. In metazoan animals, multiple external and internal stimuli, from light to temperature and even metaboli…

Drosophila melanogastermultisensory integrationcircadian clockbiological oscillatorbayesian modelingsensory conflictlcsh:Neurosciences. Biological psychiatry. Neuropsychiatrylcsh:RC321-571Frontiers in Behavioral Neuroscience
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Adaptation and ecological speciation in seasonally varying environments at high latitudes: Drosophila virilis group

2022

Living in high latitudes and altitudes sets specific requirements on species’ ability to forecast seasonal changes and to respond to them in an appropriate way. Adaptation into diverse environmental conditions can also lead to ecological speciation through habitat isolation or by inducing changes in traits that influence assortative mating. In this review, we explain how the unique time-measuring systems of Drosophila virilis group species have enabled the species to occupy high latitudes and how the traits involved in species reproduction and survival exhibit strong linkage with latitudinally varying photoperiodic and climatic conditions. We also describe variation in reproductive barriers…

Drosophila virilis groupReproductive IsolationmahlakärpäsetGenetic SpeciationLocal adaptationPhotoperiodreproductive diapauseReviewkylmänkestävyysphotoperiodic timerchromosomal inversionscircadian clockilmastoelinympäristöAnimalsmuuntelu (biologia)lepotilavuorokausirytmisopeutuminenvuodenajatkromosomi-inversiotReproductioncold tolerancelisääntyminenAdaptation Physiologicalgenome sequencingInsect SciencelajiutuminenDrosophilacandidate genesreproductive barrierslocal adaptationFly
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Copper homeostasis influences the circadian clock in Arabidopsis.

2010

Almost every aspect of plant physiology is influenced by diurnal and seasonal environmental cycles which suggests that biochemical oscillations must be a pervasive phenomenon in the underlying molecular organization. The circadian clock is entrained by light and temperature cycles, and controls a wide variety of endogenous processes that enable plants to anticipate the daily periodicity of environmental conditions. Several previous reports suggest a connection between copper (Cu) homeostasis and the circadian clock in different organisms other than plants. However, the nature of the Cu homeostasis influence on chronobiology remains elusive. Cytosolic Cu content could oscillate since Cu regu…

GeneticsChronobiologybiologyCircadian clockArabidopsisPlant physiologyEndogenyPlant Sciencebiology.organism_classificationModels BiologicalBacterial circadian rhythmsCell biologyCircadian RhythmArticle AddendumPhenotypeSeedlingsArabidopsisCircadian ClocksHomeostasisMYBCircadian rhythmLuciferasesPromoter Regions GeneticCopperPlant signalingbehavior
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Identification and characterization of circadian clock genes in the pea aphid Acyrthosiphon pisum

2010

The molecular basis of circadian clocks is highly evolutionarily conserved and has been best characterized in Drosophila and mouse. Analysis of the Acyrthosiphon pisum genome revealed the presence of orthologs of the following genes constituting the core of the circadian clock in Drosophila: period (per), timeless (tim), Clock, cycle, vrille, and Pdp1. However, the presence in A. pisum of orthologs of a mammal-type in addition to a Drosophila-type cryptochrome places the putative aphid clockwork closer to the ancestral insect system than to the Drosophila one. Most notably, five of these putative aphid core clock genes are highly divergent and exhibit accelerated rates of change (especially…

Geneticsanimal structuresbiologyTimelessPeriod (gene)Circadian clockfood and beveragesbiochemical phenomena metabolism and nutritionbiology.organism_classificationAcyrthosiphon pisumCLOCKCryptochromeInsect ScienceBotanyGeneticsCircadian rhythmMolecular BiologyGeneInsect Molecular Biology
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Mutual antagonism between clock protein Period2 and hepatitis C virus replication in hepatocytes.

2013

Background: Hepatitis C virus (HCV) infects approximately 3% of the world population and is the leading cause of liver disease, impacting hepatocyte metabolism, depending on virus genotype. Hepatic metabolic functions show rhythmic fluctuations with 24-h periodicity (circadian), driven by molecular clockworks ticking through translational-transcriptional feedback loops, operated by a set of genes, called clock genes, encoding circadian proteins. Disruption of biologic clocks is implicated in a variety of disorders including fatty liver disease, obesity and diabetes. The relation between HCV replication and the circadian clock is unknown. Methods: We investigated the relationship between HCV…

Hepatitis C circadian clock viral replication interferon signaling.
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Flies in the north: locomotor behavior and clock neuron organization of Drosophila montana.

2012

The circadian clock plays an important role in adaptation in time and space by synchronizing changes in physiological, developmental, and behavioral traits of organisms with daily and seasonal changes in their environment. We have studied some features of the circadian activity and clock organization in a northern Drosophila species, Drosophila montana, at both the phenotypic and the neuronal levels. In the first part of the study, we monitored the entrained and free-running locomotor activity rhythms of females in different light-dark and temperature regimes. These studies showed that D. montana flies completely lack the morning activity component typical to more southern Drosophila speci…

LightPhysiologyPeriod (gene)Circadian clockBiologyMotor ActivityPigment dispersing factorCryptochromeBiological ClocksPhysiology (medical)medicineAnimalsDrosophila ProteinsEye ProteinsFinlandNeuronsDrosophila montanata112Behavior AnimalEcologyfungiNeuropeptidesCircadian RhythmCLOCKCryptochromesmedicine.anatomical_structureta1181DrosophilaFemalesense organsNeuronAdaptationNeuroscienceJournal of biological rhythms
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Photosensitive Alternative Splicing of the Circadian Clock Gene timeless Is Population Specific in a Cold-Adapted Fly, Drosophila montana.

2018

To function properly, organisms must adjust their physiology, behavior and metabolism in response to a suite of varying environmental conditions. One of the central regulators of these changes is organisms' internal circadian clock, and recent evidence has suggested that the clock genes are also important in the regulation of seasonal adjustments. In particular, thermosensitive splicing of the core clock gene <i>timeless</i> in a cosmopolitan fly, <i>Drosophila melanogaster</i> , has implicated this gene to be involved in thermal adaptation. To further investigate this link we examined the splicing of <i>timeless</i> in a northern malt fly species, <i&…

LightmahlakärpäsettimelessGenes InsectInvestigationsphotoperiodalternative splicingDrosophila montanaCircadian Clocks3' Untranslated Regions/genetics; Adaptation Physiological/genetics; Alternative Splicing/genetics; Analysis of Variance; Animals; Base Sequence; Circadian Clocks/genetics; Cold Temperature; Drosophila/genetics; Drosophila/physiology; Drosophila Proteins/genetics; Drosophila Proteins/metabolism; Female; Genes Insect; Geography; Introns/genetics; Light; Mutation/genetics; Alternative splicing; Drosophila montana; light-dark cycle; temperature; timelessAnimalsDrosophila Proteins3' Untranslated RegionsvuorokausirytmisopeutuminenAnalysis of VariancegeenitBase SequenceGeographyfungitemperatureAdaptation PhysiologicalIntronsCold TemperatureAlternative Splicinglight-dark cyclepopulaatiogenetiikkaMutationDrosophilaFemalelämpötilaDrosophila Montana
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Mutual Antagonism between Circadian Protein Period 2 and Hepatitis C Virus Replication in Hepatocytes

2013

BackgroundHepatitis C virus (HCV) infects approximately 3% of the world population and is the leading cause of liver disease, impacting hepatocyte metabolism, depending on virus genotype. Hepatic metabolic functions show rhythmic fluctuations with 24-h periodicity (circadian), driven by molecular clockworks ticking through translational-transcriptional feedback loops, operated by a set of genes, called clock genes, encoding circadian proteins. Disruption of biologic clocks is implicated in a variety of disorders including fatty liver disease, obesity and diabetes. The relation between HCV replication and the circadian clock is unknown.MethodsWe investigated the relationship between HCV core…

MaleGastroenterology and hepatologyCircadian clockHepacivirusVirus ReplicationHepatitisMolecular cell biologyCellular Stress ResponsesMultidisciplinaryViral Core ProteinsQMechanisms of Signal TransductionRPeriod Circadian ProteinsMiddle AgedHepatitis CCLOCKPER2ARNTLInfectious hepatitisLiverMedicineInfectious diseasesRNA ViralFemaleResearch ArticleSignal TransductionPER1AdultHistologyFeedback RegulationGenotypeSciencePeriod (gene)DNA transcriptionViral diseasesGenome ViralBiologyCell LineCell Line TumorGeneticsHumansBiologyLiver diseasesAgedVirologyHepatocytesPeriod Circadian ProteinsGene expressionARNTL2PLoS ONE
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Transcriptional regulation of nucleoredoxin-like genes takes place on a daily basis in the retina and pineal gland of rats.

2015

AbstractThe nucleoredoxin-like gene Nxnl1 (Txnl6) and its paralogue Nxnl2 encode the rod-derived cone viability factors (RdCVF and RdCVF2), which increase the resistance to photooxidative damage and have therapeutic potential for the survival of cones in retinitis pigmentosa. In this study, the transcription of Nxnl genes was investigated as a function of the day/night cycle in rats. The transcript levels of Nxnl1 and Nxnl2 were seen to display daily rhythms with steadily increasing values during the light phase and peak expression around dark onset in preparations of whole retina, photoreceptor cells and—but only in regard to Nxnl1—in photoreceptor-related pinealocytes. The cycling of Nxnl…

Malemedicine.medical_specialtyPhysiologyCircadian clockLaser Capture MicrodissectionBiologyPineal GlandRetinaPinealocyteRats Sprague-DawleyPineal glandInternal medicineRetinitis pigmentosamedicineAnimalsPhotoreceptor CellsCircadian rhythmRNA MessengerRegulation of gene expressionHomeodomain ProteinsRetinaGenes HomeoboxNuclear ProteinsDarknessmedicine.diseaseSensory SystemsCircadian RhythmRatsEndocrinologymedicine.anatomical_structureGene Expression RegulationDarknessFemalesense organsOxidoreductasesVisual neuroscience
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